Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_J03
(643 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 114 8e-26
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 112 4e-25
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 111 6e-25
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 107 1e-23
AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprot... 107 1e-23
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 107 2e-23
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 106 3e-23
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 105 4e-23
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 105 4e-23
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 101 6e-22
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 100 1e-21
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 99 3e-21
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 99 3e-21
AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 100 3e-21
AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p pro... 97 2e-20
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 96 3e-20
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 95 5e-20
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 95 5e-20
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 95 7e-20
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 94 2e-19
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 93 2e-19
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 93 3e-19
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 91 1e-18
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 89 5e-18
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 83 2e-16
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 83 2e-16
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 83 2e-16
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 83 2e-16
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 83 2e-16
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 82 7e-16
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 81 1e-15
S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotei... 40 0.003
AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated po... 29 7.1
BT011141-1|AAR82809.1| 520|Drosophila melanogaster GM02206p pro... 28 9.4
BT001894-1|AAN71683.1| 1047|Drosophila melanogaster SD17880p pro... 28 9.4
AE014135-25|AAN06556.2| 1314|Drosophila melanogaster CG32000-PB,... 28 9.4
AE014135-24|AAN06554.2| 1314|Drosophila melanogaster CG32000-PA,... 28 9.4
AE014135-22|AAS64610.1| 1388|Drosophila melanogaster CG32000-PG,... 28 9.4
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 114 bits (275), Expect = 8e-26
Identities = 64/172 (37%), Positives = 100/172 (58%)
Frame = +2
Query: 128 AKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGMLNFYRKFIPN 307
+KS+ E+EFLG VT G+KP K+SA+ + P N R ++ +LG+L +YRKFI +
Sbjct: 508 SKSEFLRKEIEFLGHIVTQDGVKPNPNKISAIKKFPCPTNRRAIKSFLGLLGYYRKFIRD 567
Query: 308 AAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSKSGLANATLLAHPNPRAHLAIMTD 487
A + P+ L G+ + TT + +FE K+ L+N +L HP+ + TD
Sbjct: 568 FARITKPMTKQLKGK-RQVTT----DKDFVDAFEQCKTLLSNDPILIHPDFEKPFILTTD 622
Query: 488 ASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYF 643
AS+ A+GAVL Q S P+ F S+ L++ + YS ++E+LAI ++KYF
Sbjct: 623 ASNFALGAVLSQGSLQNDRPVCFASRTLSDTEVNYSTIEKEMLAIIWAVKYF 674
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1065
Score = 112 bits (269), Expect = 4e-25
Identities = 65/183 (35%), Positives = 101/183 (55%)
Frame = +2
Query: 95 RLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLG 274
+L E + + K + E EFLG +T GIKP K+ AV+N+ PK+ +E++ +LG
Sbjct: 376 KLREANLKLQLDKCEFLKKETEFLGHIITTDGIKPNPAKIKAVVNFPIPKSTKEIKSFLG 435
Query: 275 MLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSKSGLANATLLAHP 454
+ FYRKFIPN A + P+ L K + + + +FE K + + +L HP
Sbjct: 436 LCGFYRKFIPNFAKIAKPMTLRLK----KGSIINIKDSDYYLAFEKLKVLITSDPILIHP 491
Query: 455 NPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYESI 634
+ + ++ TDAS+ AIGAVL Q+ P+ + S+ LN + YS ++ELLAI +
Sbjct: 492 DFKKSFSLTTDASNFAIGAVLSQEHK----PICYASRTLNEHEVNYSAIEKELLAIVWAT 547
Query: 635 KYF 643
KYF
Sbjct: 548 KYF 550
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 111 bits (268), Expect = 6e-25
Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 6/185 (3%)
Frame = +2
Query: 98 LHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGM 277
L + + +N KS +VEFLG+ VTA GIK +KV A+ P +++EL+R+LGM
Sbjct: 305 LSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGM 364
Query: 278 LNFYRKFIPNAAHVQAPLHNILSG------QCLKATTLISWTPELEKSFEDSKSGLANAT 439
++YRKFI + A V PL N+ G + I+ +SF D KS L ++
Sbjct: 365 TSYYRKFIQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSE 424
Query: 440 LLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRELLA 619
+LA P + TDAS+ AIGAVL Q P+ + S+ LN + Y+ ++E+LA
Sbjct: 425 ILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLA 484
Query: 620 IYESI 634
I S+
Sbjct: 485 IIWSL 489
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 107 bits (258), Expect = 1e-23
Identities = 59/169 (34%), Positives = 102/169 (60%), Gaps = 7/169 (4%)
Frame = +2
Query: 152 EVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGMLNFYRKFIPNAAHVQAPL 331
+VEFLGF V+ GI+ + KV A+ ++ P+ ++ELR +LG+ +YR+FIPN A + PL
Sbjct: 395 KVEFLGFVVSDKGIETSPTKVQAISDFPIPRTLKELRSFLGLSGYYRRFIPNYAKLAKPL 454
Query: 332 HNILSGQ------CLKATTLISWTPELEKSFEDSKSGLANATLLAH-PNPRAHLAIMTDA 490
++L G+ L + +S E ++F+ KS L + ++ H P+ + + TDA
Sbjct: 455 SSLLRGEDGRISRTLSSKKSVSLNREAIEAFKKLKSSLVSPDVILHYPDFKKEFHLTTDA 514
Query: 491 SDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYESIK 637
S+ A+GAVL Q++ P+ F S+ L+ A+ Y+ ++E+LAI ++K
Sbjct: 515 SNFAVGAVLSQENR----PISFLSRTLSKAEENYATNEKEMLAIIWALK 559
>AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprotein
protein.
Length = 437
Score = 107 bits (258), Expect = 1e-23
Identities = 59/169 (34%), Positives = 102/169 (60%), Gaps = 7/169 (4%)
Frame = +2
Query: 152 EVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGMLNFYRKFIPNAAHVQAPL 331
+VEFLGF V+ GI+ + KV A+ ++ P+ ++ELR +LG+ +YR+FIPN A + PL
Sbjct: 239 KVEFLGFVVSDKGIETSPTKVQAISDFPIPRTLKELRSFLGLSGYYRRFIPNYAKLAKPL 298
Query: 332 HNILSGQ------CLKATTLISWTPELEKSFEDSKSGLANATLLAH-PNPRAHLAIMTDA 490
++L G+ L + +S E ++F+ KS L + ++ H P+ + + TDA
Sbjct: 299 SSLLRGEDGRISRTLSSKKSVSLNREAIEAFKKLKSSLVSPDVILHYPDFKKEFHLTTDA 358
Query: 491 SDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYESIK 637
S+ A+GAVL Q++ P+ F S+ L+ A+ Y+ ++E+LAI ++K
Sbjct: 359 SNFAVGAVLSQENR----PISFLSRTLSKAEENYATNEKEMLAIIWALK 403
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 107 bits (256), Expect = 2e-23
Identities = 62/183 (33%), Positives = 100/183 (54%)
Frame = +2
Query: 95 RLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLG 274
RL + KS E EFLG V+ G++P K+ A+ N+ P + + ++ +LG
Sbjct: 383 RLRSANFKVQLTKSYFLRRETEFLGHIVSQEGVRPNPNKIEAIKNFPCPHSKKSIKSFLG 442
Query: 275 MLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSKSGLANATLLAHP 454
+L +YRKFI + A + P+ L G + +I E +K+FE K+ L+N +L +P
Sbjct: 443 LLGYYRKFIRDFARLTQPMTQKLRGN--NKSIIID--DEFKKAFEYCKTLLSNDPILQYP 498
Query: 455 NPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYESI 634
+ + TDAS+ AIGAVL Q P+ F S+ L+ A+ YS ++E+LAI ++
Sbjct: 499 DFTKPFTLTTDASNFAIGAVLSQGPVHSDRPVCFASRTLSAAETNYSTIEKEMLAIIWAV 558
Query: 635 KYF 643
+YF
Sbjct: 559 QYF 561
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 106 bits (254), Expect = 3e-23
Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 2/185 (1%)
Frame = +2
Query: 95 RLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLG 274
+L + + + K + E FLG VT GIKP KV A+++Y P +E+R +LG
Sbjct: 387 KLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLG 446
Query: 275 MLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELE--KSFEDSKSGLANATLLA 448
+ +YRKFIPN A + P+ + CLK T I T +LE ++FE K+ + +L
Sbjct: 447 LTGYYRKFIPNYADIAKPMTS-----CLKKRTKID-TQKLEYIEAFEKLKALIIRDPILQ 500
Query: 449 HPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYE 628
P+ + TDAS+ A+GAVL Q P+ F S+ LN+ + YS ++ELLAI
Sbjct: 501 LPDFEKKFVLTTDASNLALGAVLSQNGH----PISFISRTLNDHELNYSAIEKELLAIVW 556
Query: 629 SIKYF 643
+ K F
Sbjct: 557 ATKTF 561
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 105 bits (253), Expect = 4e-23
Identities = 64/188 (34%), Positives = 98/188 (52%), Gaps = 1/188 (0%)
Frame = +2
Query: 83 LCSKRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELR 262
L ++L + + + K + E FLG +T GIKP +K+ A+ Y P +E++
Sbjct: 384 LVFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIK 443
Query: 263 RYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWT-PELEKSFEDSKSGLANAT 439
+LG+ +YRKFIPN A + P+ +CLK I T PE + +F+ K ++
Sbjct: 444 AFLGLTGYYRKFIPNFADIAKPM-----TKCLKKNMKIDTTNPEYDSAFKKLKYLISEDP 498
Query: 440 LLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRELLA 619
+L P+ + TDASD A+GAVL Q PL + S+ LN + YS ++ELLA
Sbjct: 499 ILKVPDFTKKFTLTTDASDVALGAVLSQDGH----PLSYISRTLNEHEINYSTIEKELLA 554
Query: 620 IYESIKYF 643
I + K F
Sbjct: 555 IVWATKTF 562
>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
protein.
Length = 1150
Score = 105 bits (253), Expect = 4e-23
Identities = 63/184 (34%), Positives = 98/184 (53%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
++L + + + K + E EFLG VT GIKP K A+ N+ PK ++++ +L
Sbjct: 460 EKLRDANLKLQLDKCEFMKKETEFLGHIVTTNGIKPNPNKTKAITNFPLPKTPKQIKSFL 519
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSKSGLANATLLAH 451
G+ FYRKFIPN A + P+ L K + + E +SFE K + + +L +
Sbjct: 520 GLCGFYRKFIPNFAKIVKPMTLKLK----KGAIIDTKCKEYIESFEKLKVLITSDPILIY 575
Query: 452 PNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYES 631
P+ ++ TDAS+ AIGAVL Q P+ + S+ LN + Y+ ++ELLAI +
Sbjct: 576 PDFSKPFSLTTDASNVAIGAVLSQNHK----PVCYASRTLNEHEINYATIEKELLAIVWA 631
Query: 632 IKYF 643
KYF
Sbjct: 632 TKYF 635
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 101 bits (243), Expect = 6e-22
Identities = 58/185 (31%), Positives = 97/185 (52%), Gaps = 1/185 (0%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
KRL E+ + + K + +++LGF + GI P + + A+ N+ P N+ ++ +L
Sbjct: 892 KRLVENKLELRIDKCEFMQSSIKYLGFIINKDGIMPNDKGIEAIKNFPIPNNVHTVQSFL 951
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSKSGLANATLLAH 451
G+ +++R+FI + + + PLH+I LK + E F K L + +LA
Sbjct: 952 GLCSYFRRFIKDFSRLAKPLHDI-----LKKDKPFKFGSEEMICFNMLKDKLIQSPVLAI 1006
Query: 452 PNPRAHLAIMTDASDSAIGAVL-QQKSDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYE 628
N + + DAS S GAVL Q+K D W P+ FFSK+ + + KY ++ E LAI
Sbjct: 1007 YNHKHETELHCDASSSGFGAVLMQKKEDQKWHPVSFFSKRTTDIESKYHSFELETLAIVY 1066
Query: 629 SIKYF 643
S++ F
Sbjct: 1067 SLRRF 1071
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 100 bits (240), Expect = 1e-21
Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 1/162 (0%)
Frame = +2
Query: 161 FLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNI 340
FLG V+ GI+P +K+ A+ NY P +E++ +LG+ FYRKFIP+ A + PL
Sbjct: 357 FLGHMVSPEGIRPNPEKLRAIENYPLPTKPKEIKSFLGLTGFYRKFIPHFAQIAKPLTT- 415
Query: 341 LSGQCLKATTLIS-WTPELEKSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVL 517
CLK + PE ++F+ K ++N +L P+ + + TDAS+ A+GAVL
Sbjct: 416 ----CLKKDKKVDIKNPEYIEAFKRLKLLISNDPILRSPDFKKKFVLTTDASNVALGAVL 471
Query: 518 QQKSDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYF 643
Q P+ + S+ LN+ + YS ++ELLAI + K F
Sbjct: 472 SQDGH----PISYISRTLNDHETNYSTIEKELLAIVWATKTF 509
Score = 31.9 bits (69), Expect = 0.76
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 22 YSDDILIASRTKDEHEHHLRAVFQA 96
Y DDI++ S + +EH LRAVFQA
Sbjct: 311 YLDDIIVFSASLEEHLQSLRAVFQA 335
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 99 bits (238), Expect = 3e-21
Identities = 64/198 (32%), Positives = 96/198 (48%)
Frame = +2
Query: 50 EQRMSTSITYVLCSKRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLN 229
E+ M ++T V R E+ + ++ K + EV FLG T GI P +K + N
Sbjct: 483 EKHMLKNLTEVFGKCR--EYNLKLHPEKCSFFMHEVTFLGHKCTDKGILPDDKKYDVIQN 540
Query: 230 YTRPKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFE 409
Y P + RR++ N+YR+FI N A + + C K WT E +K+F
Sbjct: 541 YPVPHDADSARRFVAFCNYYRRFIKNFADYSRHITRL----C-KKNVPFEWTDECQKAFI 595
Query: 410 DSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRK 589
KS L N TLL +P+ I TDAS A GAVL Q + +P+ + S+ +
Sbjct: 596 HLKSQLINPTLLQYPDFSKEFCITTDASKQACGAVLTQNHNGHQLPVAYASRAFTKGESN 655
Query: 590 YSPYDRELLAIYESIKYF 643
S ++EL AI+ +I +F
Sbjct: 656 KSTTEQELAAIHWAIIHF 673
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 99 bits (238), Expect = 3e-21
Identities = 64/198 (32%), Positives = 96/198 (48%)
Frame = +2
Query: 50 EQRMSTSITYVLCSKRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLN 229
E+ M ++T V R E+ + ++ K + EV FLG T GI P +K + N
Sbjct: 246 EKHMLKNLTEVFGKCR--EYNLKLHPEKCSFFMHEVTFLGHKCTDKGILPDDKKYDVIQN 303
Query: 230 YTRPKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFE 409
Y P + RR++ N+YR+FI N A + + C K WT E +K+F
Sbjct: 304 YPVPHDADSARRFVAFCNYYRRFIKNFADYSRHITRL----C-KKNVPFEWTDECQKAFI 358
Query: 410 DSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRK 589
KS L N TLL +P+ I TDAS A GAVL Q + +P+ + S+ +
Sbjct: 359 HLKSQLINPTLLQYPDFSKEFCITTDASKQACGAVLTQNHNGHQLPVAYASRAFTKGESN 418
Query: 590 YSPYDRELLAIYESIKYF 643
S ++EL AI+ +I +F
Sbjct: 419 KSTTEQELAAIHWAIIHF 436
>AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein
protein.
Length = 849
Score = 99.5 bits (237), Expect = 3e-21
Identities = 58/184 (31%), Positives = 95/184 (51%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
++L + + + K + E FLG +T GIKP +K+ A+ +Y P +E++ +L
Sbjct: 349 EKLSQANLKLQLDKCEFLRQETTFLGHVITKDGIKPNPEKIKAIQDYPLPSKPKEIKAFL 408
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSKSGLANATLLAH 451
G+ +YRKFIPN + + PL L K + + E ++F+ K ++ +L
Sbjct: 409 GITGYYRKFIPNFSDIAKPLTKCLK----KGVKIDTKHKEYIEAFQKLKLLISEDPILKI 464
Query: 452 PNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYES 631
PN + TDAS+ A+GAVL Q P+ + S+ LN + YS ++ELLAI +
Sbjct: 465 PNFERKFVLTTDASNVALGAVLSQDGH----PISYISRTLNEHEVNYSAIEKELLAIVWA 520
Query: 632 IKYF 643
K F
Sbjct: 521 TKTF 524
>AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p
protein.
Length = 825
Score = 96.7 bits (230), Expect = 2e-20
Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 2/200 (1%)
Frame = +2
Query: 50 EQRMSTSITYV--LCSKRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAV 223
E+ M+ ++T V LC K + + ++ K + EV FLG T GI P K A+
Sbjct: 377 EKHMTKNLTNVFELCRK----NNLKLHPDKCSFFMSEVTFLGHKCTDKGILPDDTKYDAI 432
Query: 224 LNYTRPKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKS 403
Y P + RR++ N+YR+FI N A + + C K WT + + +
Sbjct: 433 QRYPVPTDADSARRFVAFCNYYRRFIQNFADYSRHITRL----C-KKNVKFEWTADCQHA 487
Query: 404 FEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQ 583
FE K L N TLL +P+ I+TDAS A GAVL Q + +P+ + S+ +
Sbjct: 488 FEHLKKQLMNPTLLKYPDFSKEFCIITDASKEACGAVLTQNYNGIHLPVAYASRSFTKGE 547
Query: 584 RKYSPYDRELLAIYESIKYF 643
S ++EL AI+ +I +F
Sbjct: 548 SNKSTTEQELSAIHWAINHF 567
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 96.3 bits (229), Expect = 3e-20
Identities = 60/198 (30%), Positives = 97/198 (48%)
Frame = +2
Query: 50 EQRMSTSITYVLCSKRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLN 229
E+ M ++T V R ++ + ++ K + EV FLG T G+ P +K + N
Sbjct: 72 EKHMIKNLTDVFNVCR--KYNLKLHPEKCSFFMHEVTFLGHKCTDKGVLPDDKKYDVIKN 129
Query: 230 YTRPKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFE 409
Y P + RR++ N+YR+FI N A + + C K W+ E + +FE
Sbjct: 130 YPVPHDADSARRFVAFCNYYRRFIRNFADYSRHITRL----C-KKNVPFEWSSECQNAFE 184
Query: 410 DSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRK 589
K L + TLL +P+ R I+TDAS A GAVL Q + +P+ + S+ +
Sbjct: 185 YLKENLMHPTLLQYPDFRKEFCIITDASKQACGAVLTQNRNGIQLPIAYASRSFTKGESN 244
Query: 590 YSPYDRELLAIYESIKYF 643
S ++EL AI+ +I +F
Sbjct: 245 KSTTEQELAAIHWAITHF 262
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 95.5 bits (227), Expect = 5e-20
Identities = 58/184 (31%), Positives = 92/184 (50%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
KR E G+ I K + FLG + I P +K SAV ++ P+N++ ++ +L
Sbjct: 664 KRAAEFGLKIKWKKCNFMQRRIHFLGHIIEGGQICPGKEKTSAVNSFGTPQNVKAVQGFL 723
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSKSGLANATLLAH 451
G+ F+RKFIP A + PL ++ LK + + P ++S K L N +L
Sbjct: 724 GLTGFFRKFIPGYAQIARPLTDL-----LKKDAIFNIGPVEQQSVNKLKEILVNEPVLRI 778
Query: 452 PNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYES 631
+ A + TDAS +GAVL QK + + P+ F+S+K A+ Y E+ A Y +
Sbjct: 779 YSREAETELHTDASKDGLGAVLLQKFEGSFHPVCFWSRKTTKAESNRHSYYLEVKAAYLA 838
Query: 632 IKYF 643
+K F
Sbjct: 839 LKKF 842
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p
protein.
Length = 1026
Score = 95.5 bits (227), Expect = 5e-20
Identities = 58/184 (31%), Positives = 92/184 (50%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
KR E G+ I K + FLG + I P +K SAV ++ P+N++ ++ +L
Sbjct: 358 KRAAEFGLKIKWKKCNFMQRRIHFLGHIIEGGQICPGKEKTSAVNSFGTPQNVKAVQGFL 417
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSKSGLANATLLAH 451
G+ F+RKFIP A + PL ++ LK + + P ++S K L N +L
Sbjct: 418 GLTGFFRKFIPGYAQIARPLTDL-----LKKDAIFNIGPVEQQSVNKLKEILVNEPVLRI 472
Query: 452 PNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYES 631
+ A + TDAS +GAVL QK + + P+ F+S+K A+ Y E+ A Y +
Sbjct: 473 YSREAETELHTDASKDGLGAVLLQKFEGSFHPVCFWSRKTTKAESNRHSYYLEVKAAYLA 532
Query: 632 IKYF 643
+K F
Sbjct: 533 LKKF 536
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 95.1 bits (226), Expect = 7e-20
Identities = 60/198 (30%), Positives = 96/198 (48%)
Frame = +2
Query: 50 EQRMSTSITYVLCSKRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLN 229
E+ M ++T V R ++ + ++ K + EV FLG T G+ P +K + N
Sbjct: 72 EKHMIKNLTDVFNVCR--KYNLKLHPEKCSFFMHEVTFLGHKCTDKGVLPDDKKYDVIKN 129
Query: 230 YTRPKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFE 409
Y P + RR++ N+YR+FI N A + + C K W+ E + +FE
Sbjct: 130 YPVPHDADSARRFVAFCNYYRRFIRNFADYSRHITRL----C-KKNVPFEWSSEYQNAFE 184
Query: 410 DSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRK 589
K L TLL +P+ R I+TDAS A GAVL Q + +P+ + S+ +
Sbjct: 185 YLKENLMYPTLLQYPDFRKEFCIITDASKQACGAVLTQNRNGIQLPIAYASRSFTKGESN 244
Query: 590 YSPYDRELLAIYESIKYF 643
S ++EL AI+ +I +F
Sbjct: 245 KSTTEQELAAIHWAITHF 262
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 93.9 bits (223), Expect = 2e-19
Identities = 50/182 (27%), Positives = 100/182 (54%)
Frame = +2
Query: 98 LHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGM 277
L + G N AK V++LG+ V A I+P +K++++ + P+ + +R+++G+
Sbjct: 623 LTKAGFTFNLAKCSFLKTTVQYLGYEVRAGEIRPNVRKIASLSSLPPPQTVSGVRQFIGL 682
Query: 278 LNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSKSGLANATLLAHPN 457
+++RKF+ + + PL+++ SG + I+W+ ELE+ + L N L +
Sbjct: 683 ASYFRKFVSGFSQLMKPLYSLSSG-----SGKITWSAELEEIRLKVVTILTNEPALVIFD 737
Query: 458 PRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYESIK 637
P+ + + TDAS GA+L + +S + +FSK + + +Y Y+ E LA+ +++K
Sbjct: 738 PQYPIELHTDASACGYGAILLHRIESKPHVIEYFSKTTTSVESRYHSYELETLAVVKAVK 797
Query: 638 YF 643
+F
Sbjct: 798 HF 799
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1013
Score = 93.5 bits (222), Expect = 2e-19
Identities = 58/184 (31%), Positives = 100/184 (54%), Gaps = 7/184 (3%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
K L++ + I+ KS+ V FLGF VT G +KV A+ + PKN+ E+R +L
Sbjct: 339 KSLYDANMRISAEKSRFFKKSVSFLGFIVTNNGAATDPEKVKAIKEFPEPKNVFEVRSFL 398
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQ------CLKATTLISWTPELEKSFEDSKSGLAN 433
G+ ++YR FI + A + P+ +IL G+ + + ++ +++FE ++ LA+
Sbjct: 399 GLASYYRCFIKDFASIARPISDILKGENGSVSRHRSRSIQVEFSEAQQRAFEKLRNILAS 458
Query: 434 A-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRE 610
+L +P+ + + TDAS IGAVL Q+ P+ S+ L++ + Y+ +RE
Sbjct: 459 EDVILRYPDYKKAFDLTTDASAYGIGAVLSQEGR----PITMISRTLSDREVNYATNERE 514
Query: 611 LLAI 622
LLAI
Sbjct: 515 LLAI 518
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 93.1 bits (221), Expect = 3e-19
Identities = 50/171 (29%), Positives = 94/171 (54%)
Frame = +2
Query: 131 KSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLGMLNFYRKFIPNA 310
K + E+EFLG T+ + G+KP+ +K+ A+ P N ++++ +LG+ + R++I +
Sbjct: 325 KCEFAREEIEFLGHTINSEGLKPSQKKIDAICKINLPTNQKQIKSFLGITGYLRRYIKDY 384
Query: 311 AHVQAPLHNILSGQCLKATTLISWTPELEKSFEDSKSGLANATLLAHPNPRAHLAIMTDA 490
+ + PL L K + + + ++F+ K + + ++ +P+ I+TDA
Sbjct: 385 SKIAQPLIKYLK----KNSKINTHDQXYVEAFQKLKILITSDPIVVYPDFNKQFTIVTDA 440
Query: 491 SDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYF 643
S+ A+GAVL Q + + + S+ L N + YS ++ELLAIY S K+F
Sbjct: 441 SNYALGAVLMQDNK----VISYASRSLKNHELNYSTIEKELLAIYWSTKFF 487
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 10 FVFPYSDDILIASRTKDEHEHHLRAVF 90
F Y DDILI S+ EH +HL +F
Sbjct: 285 FCIVYMDDILIFSKNIGEHVNHLSCIF 311
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 91.1 bits (216), Expect = 1e-18
Identities = 59/198 (29%), Positives = 91/198 (45%)
Frame = +2
Query: 50 EQRMSTSITYVLCSKRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLN 229
E+ M ++T V + H + ++ K + EV +LG T GI P K +
Sbjct: 238 EKHMLKNLTNVF--ELCRRHNLKLHPGKCSFFMKEVTYLGHKCTDKGILPDDTKYEVIEK 295
Query: 230 YTRPKNIRELRRYLGMLNFYRKFIPNAAHVQAPLHNILSGQCLKATTLISWTPELEKSFE 409
Y P + RR++ N+YR+FI N + L + C K WT E +FE
Sbjct: 296 YPIPTDADSARRFVAFCNYYRRFIKNFSDHSRHLTRL----C-KKNVQFEWTAECNDAFE 350
Query: 410 DSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRK 589
K+ L TLL +P+ I TDAS A GAVL Q + +P+ + S+ +
Sbjct: 351 YLKTELMKPTLLQYPDFGKEFCITTDASKQACGAVLTQDHNGQQLPVAYASRMFTQGESN 410
Query: 590 YSPYDRELLAIYESIKYF 643
S ++EL AI+ +I +F
Sbjct: 411 KSTTEQELTAIHWAINHF 428
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 89.0 bits (211), Expect = 5e-18
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 7/188 (3%)
Frame = +2
Query: 95 RLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYLG 274
RL + ++ KS VE+LGF V++ GI + KV A+ Y +P N+ +R +LG
Sbjct: 369 RLSGANMRVSKEKSFFFKESVEYLGFMVSSGGITTSPSKVEAIQKYNQPTNLFSVRSFLG 428
Query: 275 MLNFYRKFIPNAAHVQAPLHNILSGQCLKATTL------ISWTPELEKSFEDSKSGLANA 436
+ ++YR FI + A + PL +IL G+ K + IS+ +FE K+ L +
Sbjct: 429 LASYYRCFIKDFASIARPLTDILKGENGKVSASQSKKIPISFDERQCSAFEKLKNVLVSE 488
Query: 437 -TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDREL 613
+L +P+ R + TDAS +GAVL Q P+ S+ L + + ++ +REL
Sbjct: 489 NVMLLYPDYRKAFDLTTDASAFGLGAVLSQDGK----PVTMISRTLQDRELNFATNEREL 544
Query: 614 LAIYESIK 637
LAI ++K
Sbjct: 545 LAIVWALK 552
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 83.4 bits (197), Expect = 2e-16
Identities = 54/184 (29%), Positives = 96/184 (52%), Gaps = 7/184 (3%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
K L + + ++ K++ VE+LGF V+ G K +KV A+ Y P + ++R +L
Sbjct: 337 KCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFL 396
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQ------CLKATTLISWTPELEKSFEDSKSGLAN 433
G+ ++YR FI + A + P+ +IL G+ + + + +F+ ++ LA+
Sbjct: 397 GLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRNILAS 456
Query: 434 A-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRE 610
+L +P+ + + TDAS S IGAVL Q+ P+ S+ L ++ Y+ +RE
Sbjct: 457 EDVILKYPDFKKPFDLTTDASASGIGAVLSQEGR----PITMISRTLKQPEQNYATNERE 512
Query: 611 LLAI 622
LLAI
Sbjct: 513 LLAI 516
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 83.4 bits (197), Expect = 2e-16
Identities = 54/184 (29%), Positives = 96/184 (52%), Gaps = 7/184 (3%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
K L + + ++ K++ VE+LGF V+ G K +KV A+ Y P + ++R +L
Sbjct: 372 KCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFL 431
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQ------CLKATTLISWTPELEKSFEDSKSGLAN 433
G+ ++YR FI + A + P+ +IL G+ + + + +F+ ++ LA+
Sbjct: 432 GLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRNILAS 491
Query: 434 A-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRE 610
+L +P+ + + TDAS S IGAVL Q+ P+ S+ L ++ Y+ +RE
Sbjct: 492 EDVILKYPDFKKPFDLTTDASASGIGAVLSQEGR----PITMISRTLKQPEQNYATNERE 547
Query: 611 LLAI 622
LLAI
Sbjct: 548 LLAI 551
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 83.4 bits (197), Expect = 2e-16
Identities = 54/184 (29%), Positives = 96/184 (52%), Gaps = 7/184 (3%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
K L + + ++ K++ VE+LGF V+ G K +KV A+ Y P + ++R +L
Sbjct: 337 KCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFL 396
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQ------CLKATTLISWTPELEKSFEDSKSGLAN 433
G+ ++YR FI + A + P+ +IL G+ + + + +F+ ++ LA+
Sbjct: 397 GLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRNILAS 456
Query: 434 A-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRE 610
+L +P+ + + TDAS S IGAVL Q+ P+ S+ L ++ Y+ +RE
Sbjct: 457 EDVILKYPDFKKPFDLTTDASASGIGAVLSQEGR----PITMISRTLKQPEQNYATNERE 512
Query: 611 LLAI 622
LLAI
Sbjct: 513 LLAI 516
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 83.4 bits (197), Expect = 2e-16
Identities = 54/184 (29%), Positives = 96/184 (52%), Gaps = 7/184 (3%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
K L + + ++ K++ VE+LGF V+ G K +KV A+ Y P + ++R +L
Sbjct: 337 KCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFL 396
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQ------CLKATTLISWTPELEKSFEDSKSGLAN 433
G+ ++YR FI + A + P+ +IL G+ + + + +F+ ++ LA+
Sbjct: 397 GLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRNILAS 456
Query: 434 A-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRE 610
+L +P+ + + TDAS S IGAVL Q+ P+ S+ L ++ Y+ +RE
Sbjct: 457 EDVILKYPDFKKPFDLTTDASASGIGAVLSQEGR----PITMISRTLKQPEQNYATNERE 512
Query: 611 LLAI 622
LLAI
Sbjct: 513 LLAI 516
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 83.4 bits (197), Expect = 2e-16
Identities = 54/184 (29%), Positives = 96/184 (52%), Gaps = 7/184 (3%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
K L + + ++ K++ VE+LGF V+ G K +KV A+ Y P + ++R +L
Sbjct: 790 KCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFL 849
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQ------CLKATTLISWTPELEKSFEDSKSGLAN 433
G+ ++YR FI + A + P+ +IL G+ + + + +F+ ++ LA+
Sbjct: 850 GLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRNILAS 909
Query: 434 A-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRE 610
+L +P+ + + TDAS S IGAVL Q+ P+ S+ L ++ Y+ +RE
Sbjct: 910 EDVILKYPDFKKPFDLTTDASASGIGAVLSQEGR----PITMISRTLKQPEQNYATNERE 965
Query: 611 LLAI 622
LLAI
Sbjct: 966 LLAI 969
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 81.8 bits (193), Expect = 7e-16
Identities = 54/184 (29%), Positives = 95/184 (51%), Gaps = 7/184 (3%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
K L + + ++ K++ VE+LGF V+ G K +KV A+ Y P + ++R +L
Sbjct: 342 KCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFL 401
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQ------CLKATTLISWTPELEKSFEDSKSGLAN 433
G+ ++YR FI + A + P+ +IL G+ + + + +F+ ++ LA+
Sbjct: 402 GLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRNILAS 461
Query: 434 A-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRE 610
+L +P + + TDAS S IGAVL Q+ P+ S+ L ++ Y+ +RE
Sbjct: 462 EDVILKYPVFKKPFDLTTDASASGIGAVLSQEGR----PITMISRTLKQPEQNYATNERE 517
Query: 611 LLAI 622
LLAI
Sbjct: 518 LLAI 521
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 81.0 bits (191), Expect = 1e-15
Identities = 53/184 (28%), Positives = 95/184 (51%), Gaps = 7/184 (3%)
Frame = +2
Query: 92 KRLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNIRELRRYL 271
K L + + ++ K++ VE+LGF V+ G +KV A+ Y P + ++R +L
Sbjct: 372 KCLIDANMRVSQEKTRFFTESVEYLGFIVSKDGTISDPEKVKAIQEYPEPDCVYKVRSFL 431
Query: 272 GMLNFYRKFIPNAAHVQAPLHNILSGQ------CLKATTLISWTPELEKSFEDSKSGLAN 433
G+ ++YR FI + A + P+ +IL G+ + + + +F+ ++ LA+
Sbjct: 432 GLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRNILAS 491
Query: 434 A-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRE 610
+L +P+ + + TDAS S IGAVL Q+ P+ S+ L ++ Y+ +RE
Sbjct: 492 EDVILKYPDFKKPFDLTTDASASGIGAVLSQEGR----PITMISRTLKQPEQNYATNERE 547
Query: 611 LLAI 622
LLAI
Sbjct: 548 LLAI 551
>S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotein
protein.
Length = 624
Score = 39.9 bits (89), Expect = 0.003
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +2
Query: 476 IMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYF 643
I TDAS A GAVL Q + +P+ + S+ + S ++EL AI+ +I +F
Sbjct: 5 ITTDASKQACGAVLSQDHNGQQLPVAYASRSFTKGESNKSTTEQELAAIHWAINHF 60
>AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated pol
protein protein.
Length = 407
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 95 RLHEHGVLINCAKSQLGVPEVEFLGFTVTAAGIKPTTQKVSAV 223
+L + I +K E++FLG VT G+KP K+ +
Sbjct: 365 KLQNANLKIQPSKCSFLRKEIDFLGHIVTQEGVKPNPLKIQTI 407
>BT011141-1|AAR82809.1| 520|Drosophila melanogaster GM02206p
protein.
Length = 520
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 155 VEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNI 250
+EFLGF + +KP T KV LN + + I
Sbjct: 426 MEFLGFVILENRLKPDTTKVINALNAAKIRTI 457
>BT001894-1|AAN71683.1| 1047|Drosophila melanogaster SD17880p
protein.
Length = 1047
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 155 VEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNI 250
+EFLGF + +KP T KV LN + + I
Sbjct: 802 MEFLGFVILENRLKPDTTKVINALNAAKIRTI 833
>AE014135-25|AAN06556.2| 1314|Drosophila melanogaster CG32000-PB,
isoform B protein.
Length = 1314
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 155 VEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNI 250
+EFLGF + +KP T KV LN + + I
Sbjct: 728 MEFLGFVILENRLKPDTTKVINALNAAKIRTI 759
>AE014135-24|AAN06554.2| 1314|Drosophila melanogaster CG32000-PA,
isoform A protein.
Length = 1314
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 155 VEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNI 250
+EFLGF + +KP T KV LN + + I
Sbjct: 728 MEFLGFVILENRLKPDTTKVINALNAAKIRTI 759
>AE014135-22|AAS64610.1| 1388|Drosophila melanogaster CG32000-PG,
isoform G protein.
Length = 1388
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 155 VEFLGFTVTAAGIKPTTQKVSAVLNYTRPKNI 250
+EFLGF + +KP T KV LN + + I
Sbjct: 802 MEFLGFVILENRLKPDTTKVINALNAAKIRTI 833
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,540,721
Number of Sequences: 53049
Number of extensions: 592828
Number of successful extensions: 1601
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1557
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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