Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_J01
         (575 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC066986-1|AAH66986.1|  131|Homo sapiens chromosome 6 open readi...    31   3.8  
BC032622-1|AAH32622.2| 1030|Homo sapiens SETX protein protein.         30   5.1  
AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor aprax...    30   5.1  
AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein.            30   5.1  
AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein.            30   5.1  
AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein.     30   5.1  
AF395258-1|AAL35207.1|  128|Homo sapiens dopamine receptor D4 pr...    30   6.7  
AF395252-1|AAL35201.1|  112|Homo sapiens dopamine receptor D4 pr...    30   6.7  

>BC066986-1|AAH66986.1|  131|Homo sapiens chromosome 6 open
          reading frame 201 protein.
          Length = 131

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 16/29 (55%), Positives = 16/29 (55%)
 Frame = -1

Query: 95 PRGPGAICCWDGPPTPRAGHCKPGGAPPG 9
          P GPGA      PP P   H KP GAPPG
Sbjct: 5  PLGPGARPTRLHPPFPPPAHIKP-GAPPG 32


>BC032622-1|AAH32622.2| 1030|Homo sapiens SETX protein protein.
          Length = 1030

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -3

Query: 552 YHKYKGYFNIYLPHKYILRFYKMYMEW-SLLFKEKTYYLKVR 430
           +H Y  YFN++ P   +  F  +  EW +   +E  Y L+VR
Sbjct: 90  FHNYGDYFNVFFPLMVLNTFETVAQEWLNSPNRENFYQLQVR 131


>AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor apraxia
            protein 2 protein.
          Length = 2677

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -3

Query: 552  YHKYKGYFNIYLPHKYILRFYKMYMEW-SLLFKEKTYYLKVR 430
            +H Y  YFN++ P   +  F  +  EW +   +E  Y L+VR
Sbjct: 1737 FHNYGDYFNVFFPLMVLNTFETVAQEWLNSPNRENFYQLQVR 1778


>AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein.
          Length = 2677

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -3

Query: 552  YHKYKGYFNIYLPHKYILRFYKMYMEW-SLLFKEKTYYLKVR 430
            +H Y  YFN++ P   +  F  +  EW +   +E  Y L+VR
Sbjct: 1737 FHNYGDYFNVFFPLMVLNTFETVAQEWLNSPNRENFYQLQVR 1778


>AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein.
          Length = 2677

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -3

Query: 552  YHKYKGYFNIYLPHKYILRFYKMYMEW-SLLFKEKTYYLKVR 430
            +H Y  YFN++ P   +  F  +  EW +   +E  Y L+VR
Sbjct: 1737 FHNYGDYFNVFFPLMVLNTFETVAQEWLNSPNRENFYQLQVR 1778


>AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein.
          Length = 2663

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -3

Query: 552  YHKYKGYFNIYLPHKYILRFYKMYMEW-SLLFKEKTYYLKVR 430
            +H Y  YFN++ P   +  F  +  EW +   +E  Y L+VR
Sbjct: 1723 FHNYGDYFNVFFPLMVLNTFETVAQEWLNSPNRENFYQLQVR 1764


>AF395258-1|AAL35207.1|  128|Homo sapiens dopamine receptor D4
           protein.
          Length = 128

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -1

Query: 95  PRGP-GAICCWDGPPTPRAGHCKPGGAPPGP 6
           PRGP G  C    P  PR G C P  APP P
Sbjct: 70  PRGPCGPDCAPPAPGLPR-GPCGPDCAPPAP 99


>AF395252-1|AAL35201.1|  112|Homo sapiens dopamine receptor D4
           protein.
          Length = 112

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -1

Query: 95  PRGP-GAICCWDGPPTPRAGHCKPGGAPPGP 6
           PRGP G  C    P  PR G C P  APP P
Sbjct: 54  PRGPCGPDCAPPAPGLPR-GPCGPDCAPPAP 83


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,422,301
Number of Sequences: 237096
Number of extensions: 1698817
Number of successful extensions: 4880
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4880
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)