Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_J01
         (575 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   3.8  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   3.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   6.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.7  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 534 YFNIYLPHKYILR 496
           Y NI++P KY LR
Sbjct: 128 YLNIWVPQKYRLR 140


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 534 YFNIYLPHKYILR 496
           Y NI++P KY LR
Sbjct: 128 YLNIWVPQKYRLR 140


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 382 KFMNILMIIPEESVQSY 332
           KFMN+ M+   ESV S+
Sbjct: 912 KFMNVNMLDTYESVHSF 928


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 144 TTSWYDGSSSRYGSRWPRRQRTSRNATI 227
           +T + +GS   YG     R+ T RN  I
Sbjct: 142 STVYSEGSYGEYGIEVFTREATERNVCI 169


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 144 TTSWYDGSSSRYGSRWPRRQRTSRNATI 227
           +T + +GS   YG     R+ T RN  I
Sbjct: 232 STVYSEGSYGEYGIEVFTREATERNVCI 259


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,929
Number of Sequences: 438
Number of extensions: 3281
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)