Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_I23
(618 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0614 - 22753092-22753349,22754059-22754277,22754712-227549... 55 4e-08
09_01_0079 - 1159963-1160211,1160303-1160509,1160631-1160801,116... 47 1e-05
04_04_0435 - 25170348-25170593,25170989-25171189,25171580-251717... 46 3e-05
08_02_0162 + 13464698-13464974,13465719-13465837,13465920-134665... 43 2e-04
11_01_0002 + 3386-3541,3619-3717,4114-4182,4275-4459,4662-4677 41 0.001
12_01_0001 + 1777-1935,2002-2109,2492-2560,2652-2836,3040-3055 40 0.002
07_01_0911 - 7664498-7664704,7664790-7664858,7666441-7666569 40 0.002
10_01_0298 - 3094197-3094307,3095093-3095253,3095462-3095666,309... 39 0.003
02_05_1015 + 33512023-33512359,33513550-33514082 38 0.005
02_05_1014 + 33510108-33510471,33510857-33511362 38 0.008
03_02_0555 + 9431451-9431688,9432685-9432803,9432886-9433079,943... 36 0.026
02_05_1206 + 34941293-34941562,34942052-34942153,34942249-349425... 35 0.045
04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276 33 0.24
09_02_0211 - 5817564-5817578,5817711-5818040,5818095-5818196,581... 32 0.32
03_06_0337 + 33224333-33224479,33224603-33224663,33224740-332247... 30 1.3
11_06_0592 - 25327128-25329566 30 1.7
02_02_0387 - 9606744-9607475 30 1.7
09_04_0367 - 16978069-16978085,16978514-16978611,16979069-169792... 29 2.2
03_06_0507 + 34404843-34404968,34405091-34405151,34405260-344052... 29 3.0
07_03_1581 + 27891709-27891964,27892749-27892800,27893071-278931... 29 3.9
07_03_1544 - 27585581-27585757,27585986-27586091,27586246-275863... 28 5.2
04_04_1376 + 33058306-33059763,33059851-33059991,33060594-330606... 28 5.2
11_02_0073 - 8020401-8020512,8020594-8020679,8020761-8020921,802... 28 6.8
07_03_1400 + 26287124-26287298,26287925-26288007,26288141-262882... 28 6.8
06_03_0500 + 21470681-21470952,21471049-21471089,21472322-214724... 28 6.8
01_04_0003 - 14989160-14989445,14989673-14989807,14991418-149915... 28 6.8
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 27 9.0
06_03_0097 - 16607936-16608712,16610114-16610320,16611220-166113... 27 9.0
01_06_1775 - 39808794-39808919,39809021-39809127,39810594-39812178 27 9.0
>06_03_0614 -
22753092-22753349,22754059-22754277,22754712-22754960,
22755186-22755275,22755379-22755456,22755562-22756337,
22757042-22757384
Length = 670
Score = 55.2 bits (127), Expect = 4e-08
Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Frame = +1
Query: 28 RVNAERAKRELDGKMRNGRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRAFEI 183
R +A RA L+ + NG+ +RV F+ + +R +KNL P + N+ LY F
Sbjct: 112 REDATRAMENLNFTVVNGKPIRVMFSNRDPTLRKSGLANVFIKNLEPNIDNKSLYEMFSS 171
Query: 184 FGKIERAYVRVDERGKTLGEGVVEFARKPSALAAIRN-----CTEKCFFLTSSLRPVIVE 348
FG I + V D GK+ G G ++F + SA AI + F+ +R E
Sbjct: 172 FGTILSSKVATDFNGKSKGYGFIQFESESSAKDAINGLNGMLANGQKIFVGLFIRRQERE 231
Query: 349 NFEEPDEFDGYPEKNLPK 402
+ + + F KNLPK
Sbjct: 232 HTGDANNFTNVYVKNLPK 249
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 127 VKNLPPFVSNELLYRAFEIFGKIERAYVRVDERGKTLGEGVVEFARKPSALAAI 288
+KNL +++E L + FE FG++ V +D G++ G G V FA A AI
Sbjct: 347 LKNLDDDINDEHLRKLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAI 400
>09_01_0079 -
1159963-1160211,1160303-1160509,1160631-1160801,
1161732-1161869,1162184-1162273,1162354-1162431,
1162510-1163166,1163245-1163363,1164305-1164584
Length = 662
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Frame = +1
Query: 34 NAERAKRELDGKMRNGRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRAFEIFG 189
+A RA L+ NG+ +R+ ++ + ++R +KNL + N+ LY F +FG
Sbjct: 93 DAARALEMLNFTPINGKPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFG 152
Query: 190 KIERAYVRVDERGKTLGEGVVEFARKPSALAAI 288
I V D G++ G G V++ R +A AAI
Sbjct: 153 NILSCKVATDASGESKGYGFVQYERDEAAQAAI 185
Score = 33.1 bits (72), Expect = 0.18
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +1
Query: 40 ERAKRELDGKMRNGRTLRVRFAPH-NSAVRVKNLPPFVSNELLYRAFEIFGKIERAYVRV 216
++++RE++ K + + L+ + N+ + +KNL V ++ L F +G I V
Sbjct: 296 KKSEREMELKEKFEKNLQEAADKYQNTNLYLKNLDDSVDDDKLRELFAEYGTITSCKVMR 355
Query: 217 DERGKTLGEGVVEFARKPSALAAIRNCTEK 306
D G + G G V F A A+ K
Sbjct: 356 DSNGVSRGSGFVAFKSAEDASRALAEMNSK 385
>04_04_0435 -
25170348-25170593,25170989-25171189,25171580-25171756,
25172284-25172418,25173131-25173262,25173292-25173369,
25173452-25174108,25174210-25174328,25175897-25176173
Length = 673
Score = 45.6 bits (103), Expect = 3e-05
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Frame = +1
Query: 31 VNAERAKRELDGKMRNGRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRAFEIF 186
V+A RA L+ NG+ +RV ++ + + R +KNL + ++ L+ F F
Sbjct: 91 VDAARALELLNFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAF 150
Query: 187 GKIERAYVRVDERGKTLGEGVVEFARKPSALAAIRN-----CTEKCFFLTSSLRPVIVEN 351
G I V DE G++ G G V++ + +A +AI++ +K ++ LR EN
Sbjct: 151 GNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQEREN 210
Query: 352 FEEPDEFDGYPEKNL 396
+ +F+ KNL
Sbjct: 211 SVDKTKFNNVFVKNL 225
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 40 ERAKRELDGKMRNGRTLRVRFAPHNSA-VRVKNLPPFVSNELLYRAFEIFGKIERAYVRV 216
++++RE++ K R ++++ + + +KNL + ++ L F +GKI +
Sbjct: 295 KKSEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQLCELFSNYGKITSCKIMR 354
Query: 217 DERGKTLGEGVVEFARKPSALAAI 288
D G + G G V F+ + A A+
Sbjct: 355 DANGVSKGSGFVAFSTREEASQAL 378
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +1
Query: 121 VRVKNLPPFVSNELLYRAFEIFGKIERAYVRVDERGKTLGEGVVEFARKPSALAAIRNCT 300
V VKNL + E L + F +G I A + V GK+ G + F A A+
Sbjct: 220 VFVKNLSESTTKEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELN 279
Query: 301 EK 306
K
Sbjct: 280 GK 281
>08_02_0162 +
13464698-13464974,13465719-13465837,13465920-13466579,
13466686-13466763,13466849-13466938,13467241-13467378,
13467730-13467738
Length = 456
Score = 42.7 bits (96), Expect = 2e-04
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Frame = +1
Query: 34 NAERAKRELDGKMRNGRTLRVRFAPHNSAVR--------VKNLPPFVSNELLYRAFEIFG 189
+A RA L+ NG+ +R+ ++ + + R +KNL + N+ LY F +FG
Sbjct: 92 DAARALEMLNFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFG 151
Query: 190 KIERAYVRVDERGKTLGEGVVEFARKPSALAAIRN-----CTEKCFFLTSSLRPVIVENF 354
I V + G++ G G V+F + +A AI +K ++ +R EN
Sbjct: 152 NILSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERENV 211
Query: 355 EEPDEFDGYPEKNLPKKHPE 414
+F+ KNL + E
Sbjct: 212 SGNPKFNNVYVKNLSESTTE 231
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = +1
Query: 106 PHNSAVRVKNLPPFVSNELLYRAFEIFGKIERAYVRVDERGKTLGEGVVEFARKPSALAA 285
P + V VKNL + + L F FG I V + GK+ G V F A A
Sbjct: 215 PKFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARA 274
Query: 286 IRNCTEKCF 312
+ + K F
Sbjct: 275 VEDLNGKKF 283
>11_01_0002 + 3386-3541,3619-3717,4114-4182,4275-4459,4662-4677
Length = 174
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +1
Query: 121 VRVKNLPPFVSNELLYRAFEIFGKIERAYVRVDERGKTLGEGVVEFARKPSALAAIR 291
+ + NL VSNE + F G ++R + D+ G++ G V F+RK ALAA++
Sbjct: 70 LHISNLDYAVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEVVFSRKSDALAAVK 126
>12_01_0001 + 1777-1935,2002-2109,2492-2560,2652-2836,3040-3055
Length = 178
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 127 VKNLPPFVSNELLYRAFEIFGKIERAYVRVDERGKTLGEGVVEFARKPSALAAIR 291
+ NL VSNE + F G ++R + D G++ G V F+RK ALAA++
Sbjct: 76 ISNLDYAVSNEDIKELFSEVGDVKRYSINYDRSGRSKGTAEVVFSRKSDALAAVK 130
>07_01_0911 - 7664498-7664704,7664790-7664858,7666441-7666569
Length = 134
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +1
Query: 121 VRVKNLPPFVSNELLYRAFEIFGKIERAYVRVDERGKTLGEGVVEFARKPSALAAIR 291
+ + NL P V+ + + F G+++R V D+ GK+ G V FARK AL AI+
Sbjct: 28 LHISNLDPGVTVDDVQELFSEIGELKRYSVNYDKDGKSQGTAEVVFARKVDALEAIK 84
>10_01_0298 -
3094197-3094307,3095093-3095253,3095462-3095666,
3096349-3096534,3096616-3096756,3096843-3096959,
3097046-3097456
Length = 443
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 121 VRVKNLPPFVSNELLYRAFEIFGKIERAYVRVDERGKTLGEGVVEFARKPSALAAIR 291
+ VKNLP S E + FEI G++ + + + G G V FA + SAL A++
Sbjct: 289 IYVKNLPENASKEKIKEIFEIHGEVTKVVLPPAKAGNKRDFGFVHFAERSSALKAVK 345
>02_05_1015 + 33512023-33512359,33513550-33514082
Length = 289
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = +1
Query: 70 MRNGRTLRV----RFAPHNSAVRVKNLPPFVSNELLYRAFEIFGKIERAYVRVDER-GKT 234
MR+G RV R ++VRV NL L F FG + R YV VD++ G +
Sbjct: 189 MRSGAVDRVGHDMRRRNDENSVRVTNLSEDTREPDLLELFRTFGPVSRVYVAVDQKTGAS 248
Query: 235 LGEGVVEFARKPSALAAI 288
G G V F + A AI
Sbjct: 249 RGFGFVNFVHREDAEKAI 266
>02_05_1014 + 33510108-33510471,33510857-33511362
Length = 289
Score = 37.5 bits (83), Expect = 0.008
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 82 RTLRVRFAPHNSAVRVKNLPPFVSNELLYRAFEIFGKIERAYVRVDER-GKTLGEGVVEF 258
R +R ++VRV NL E L F FG + RAYV +D R G++ G G + F
Sbjct: 197 RESEMRRRNDENSVRVTNLSEDTREEDLRELFGSFGPLTRAYVALDHRTGESRGFGFLSF 256
Query: 259 ARKPSALAAI 288
+ A AI
Sbjct: 257 VYREDAERAI 266
>03_02_0555 +
9431451-9431688,9432685-9432803,9432886-9433079,
9433174-9433430,9433544-9433650,9433715-9433888,
9434359-9434490,9434776-9434955,9435062-9435265
Length = 534
Score = 35.9 bits (79), Expect = 0.026
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +1
Query: 109 HNSAVRVKNLPPFVSNELLYRAFEIFGKIERAYVRVDERGKTLGEGVVEFARKPSALAAI 288
+ S V +KN+ V ++ L F FG I A + DE+G + G G V + A A+
Sbjct: 305 NGSNVYIKNINDEVGDDALRERFNEFGNITSAKIMRDEKGISKGFGFVCYNTPEEAKCAM 364
Query: 289 RN 294
RN
Sbjct: 365 RN 366
>02_05_1206 +
34941293-34941562,34942052-34942153,34942249-34942521,
34942863-34942913
Length = 231
Score = 35.1 bits (77), Expect = 0.045
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Frame = +1
Query: 34 NAERAKRELDGKMRNGRTLRVRFA----------PHNS-AVRVKNLPPFVSNELLYRAFE 180
+ E+ + LDG + +GRT+RV FA P + V NL V++E+L F+
Sbjct: 113 DCEQVIKNLDGSLYSGRTMRVNFADKPKPKLPLYPETEHKLFVGNLSWTVTSEMLTEMFQ 172
Query: 181 IFGKIERAYVRVD-ERGKTLGEGVVEFARK 267
G + A V D E G++ G G V ++ K
Sbjct: 173 KCGNVVGARVLYDGETGRSRGYGFVCYSTK 202
>04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276
Length = 924
Score = 32.7 bits (71), Expect = 0.24
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 127 VKNLPPFVSNELLYRAFEIFGKIERAYVRVDE-RGKTLGEGVVEFARKPSALAAI 288
V +LP +V+NE L F G+I +A V V+ G + G G V+FA SA A+
Sbjct: 704 VSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVAL 758
Score = 29.1 bits (62), Expect = 3.0
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Frame = +1
Query: 112 NSAVRVKNLPPFVSNELLYRAFEIFGKIERAYVRVDE--RGKTLGEGVVEFARKPSALAA 285
N+ + V NLP V + L F FG+I R+ V VD+ G + G G V+++ A A
Sbjct: 208 NTNLYVGNLPASVGSHKLIELFLPFGQIVRSRV-VDDCFTGLSQGYGFVKYSDPRCASEA 266
Query: 286 IRNCTEKCFFLTSSLRPVIVENFEEPDEFDGYPEK 390
I+ + + + V V F ++ P K
Sbjct: 267 IKRMNGR--LVEGTALKVRVTGFPSSEDNSQQPSK 299
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 115 SAVRVKNLPPFVSNELLYRAFEIFGKIERAYVRVD-ERGKTLGEGVVEFARKPSALAAI 288
S + V N+P + + L F FGKI A V D + G G ++F SA AI
Sbjct: 417 SNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAI 475
>09_02_0211 -
5817564-5817578,5817711-5818040,5818095-5818196,
5818616-5818915
Length = 248
Score = 32.3 bits (70), Expect = 0.32
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +1
Query: 103 APHNSAVR---VKNLPPFVSNELLYRAFEIFGKIERAYVRVDE-RGKTLGEGVVEFARKP 270
AP A R V N+P V+N+ L F G +ERA V D+ G++ G V +
Sbjct: 63 APEEVAARKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPE 122
Query: 271 SALAAIRNCTE 303
A AAI + E
Sbjct: 123 EANAAIESLNE 133
>03_06_0337 +
33224333-33224479,33224603-33224663,33224740-33224776,
33225237-33225367,33225447-33225590,33225686-33225776,
33225973-33226106,33226234-33226373,33227328-33227426,
33227520-33227602,33227690-33227744,33227826-33227937,
33228274-33228766,33228881-33229094,33229203-33229273,
33229733-33229901,33229991-33230120,33230556-33230968,
33231059-33231262
Length = 975
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 127 VKNLPPFVSNELLYRAFEIFGKIERAYVRVDERGK-TLGEGVVEFARKPSALAAI 288
+ NLP +SNE + F FGK+E + + + K G G ++F+ +A AA+
Sbjct: 542 ISNLPFDLSNEEVTERFSAFGKVESFFPVLHKLTKRPRGTGFLKFSTPEAADAAV 596
>11_06_0592 - 25327128-25329566
Length = 812
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Frame = +2
Query: 359 NPMNLMVTLRRICPK----NIQNLCGLERLDHDFRRLAVLSMNMVQDGSNSMSFTDRRKR 526
NPM+ MV L + P+ N+ +L G +RL+ + ++ + ++ S + +
Sbjct: 407 NPMDGMVKLLKELPEEYRLNVIDLGGCQRLEKSHLK-SICKVTSLKYLSLRNTDVSSLPK 465
Query: 527 RLRKSWPLKKKSWRHKWNMPSTNMRRNY 610
++ W L+ R MP+T MRR Y
Sbjct: 466 KMEDLWQLETLDIRDTKKMPATAMRRIY 493
>02_02_0387 - 9606744-9607475
Length = 243
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 133 NLPPFVSNELLYRAFEIFGKIERAYVRVDERGKTLGEGVVEFARKPSALAAIRNC 297
+L P V L + GK+ +A V D+RG++ G G V A + A+ C
Sbjct: 144 DLSPQVDRLRLREMYSEHGKVVQARVVYDKRGRSRGFGFVTMATQEGFYRALGRC 198
>09_04_0367 -
16978069-16978085,16978514-16978611,16979069-16979229,
16979320-16979548,16979731-16980593
Length = 455
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +1
Query: 244 GVVEFARKPSALA---AIRNCTEKCFFLTSSLRPVIVENFEEPDEFDGYPEKNLPKKHPE 414
GV + R PS+L +RNC +S + V+VE+ E D+ + K P HP
Sbjct: 17 GVGKLTRTPSSLLRSPTVRNC--------ASFQAVVVEDPEPDDKKEQAQAKPPPHLHPH 68
Query: 415 FMRAREV 435
+RA V
Sbjct: 69 LLRAAAV 75
>03_06_0507 +
34404843-34404968,34405091-34405151,34405260-34405296,
34405365-34405386,34405861-34405957,34406037-34406180,
34407034-34407173,34408205-34408255,34408347-34408429,
34408515-34408590,34408646-34408760,34409080-34409575,
34409682-34409895,34410000-34410070,34410527-34410695,
34410787-34410916,34411330-34411742,34411839-34412039
Length = 881
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 133 NLPPFVSNELLYRAFEIFGKIERAYVRVDERGK-TLGEGVVEFARKPSALAAI 288
NLP +SNE + F FGK+E + + + K G G ++F+ +A AA+
Sbjct: 451 NLPFDLSNEEVTERFSAFGKVESFFPVLHKLTKRPRGTGFLKFSTAEAADAAV 503
>07_03_1581 +
27891709-27891964,27892749-27892800,27893071-27893138,
27893321-27893410,27893503-27893633,27893913-27894047,
27894124-27894141
Length = 249
Score = 28.7 bits (61), Expect = 3.9
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +1
Query: 19 QDYRVNAERAKRELDGKMRNGRTLRVRFAPHNSAVRVKN-LPPFVSNELLYRAFEIFGKI 195
+D ERA + LDG + G R P+ + V+ L + + +Y E G+
Sbjct: 31 EDAEAARERALKRLDGLGKRGVCYLSRVPPNMNPSHVRQMLSKYGEVQRIYLVPE--GQG 88
Query: 196 ERAYVRVDERGKTLGEGVVEFARKPSA 276
R + V R K EG +EF++K A
Sbjct: 89 HRKHTNV--RAKAYTEGWIEFSKKSVA 113
>07_03_1544 -
27585581-27585757,27585986-27586091,27586246-27586338,
27587840-27587958,27588486-27588746,27589226-27589515,
27589624-27590152
Length = 524
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 484 LYHIHAQNCQPPKIVVQP 431
+Y+I+A NCQ P +VV P
Sbjct: 338 IYNIYAPNCQSPGLVVSP 355
>04_04_1376 +
33058306-33059763,33059851-33059991,33060594-33060644,
33061094-33061171,33061245-33061388,33061871-33062002
Length = 667
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = -2
Query: 335 GRSEDVRKKHFSVQLRMAAKALGFLANSTTPSPNVFPLSSTLT*ALSIFPNISKALYKSS 156
G S ++ S+ +A+ + ++ PSPN + STL L + + L SS
Sbjct: 234 GASTSFSHRNDSIFHNIASSSHNPSPSTNLPSPNCLLVPSTLDEQLPRYGATTAGLSSSS 293
Query: 155 FDTNGG 138
+D +GG
Sbjct: 294 YDPSGG 299
>11_02_0073 -
8020401-8020512,8020594-8020679,8020761-8020921,
8021196-8021400,8021664-8021697,8022352-8022422,
8023363-8023542,8023625-8023765,8023859-8023975,
8024074-8024469
Length = 500
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 37 AERAKRELDGKMRNGRTLRVRFAPHNSAVRVKNLPPFVSNELLYRAFE 180
A+RA EL K GRTLR + + V N+P + E L + +
Sbjct: 158 AQRAIEELHDKEHKGRTLRCSLSQAKHRLFVGNVPKGLGEEELRKIIQ 205
>07_03_1400 +
26287124-26287298,26287925-26288007,26288141-26288270,
26288369-26288442,26288797-26288883,26288976-26289100,
26289232-26289292,26289606-26289683,26289785-26289890,
26289978-26290123,26290264-26290380
Length = 393
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 292 NCTEKCFFLTSSLRPVIVENFEEPDEFDGYPEKNLPKKHPEFMRAREVGPRFSEAGSF 465
N + C F SS R + E +F G N P+++P+F V R+ + GSF
Sbjct: 92 NDVKSCVFRKSSRRGSS-NHMESQLQFTGIMS-NRPEENPDFYNWNRVKVRYCDGGSF 147
>06_03_0500 +
21470681-21470952,21471049-21471089,21472322-21472485,
21472577-21472679,21472806-21472975,21473766-21474239
Length = 407
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 106 PHNSAVRVKNLPPFVSNELLYRAFEIFGKIERAYVRVDE-RGKTLGEGVVEF 258
P + V +PP ++ + L F +GK+ + +D G++ G G V F
Sbjct: 177 PKTRKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTF 228
>01_04_0003 -
14989160-14989445,14989673-14989807,14991418-14991508,
14991571-14991712,14991924-14992403,14992610-14993548
Length = 690
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 163 LYRAFEIFGKIERAYVRVDER-GKTLGEGVVEFARKPSALAAIRNCTE 303
L + F +G++ A V D+R G + G G + + A AAIR C E
Sbjct: 531 LEKKFSKYGRVTSARVVRDKRSGDSRGFGFLSLEKDEDADAAIRACDE 578
>07_03_1291 + 25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 485 DGSNSMSFTDRRKRRLRKSW 544
DGS+ MSF++ R LR+ W
Sbjct: 976 DGSHEMSFSEHEHRILRRKW 995
>06_03_0097 -
16607936-16608712,16610114-16610320,16611220-16611336,
16611409-16611690,16611811-16612294,16612791-16612929,
16613138-16613243,16613396-16613562,16613632-16613707,
16614173-16614321,16614813-16614874,16615232-16615335,
16616856-16616950,16617046-16617136,16617785-16617922
Length = 997
Score = 27.5 bits (58), Expect = 9.0
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +1
Query: 217 DERGKTLGEGVVEFARKPSALAAIRNCTEKCFFLTSSLRPVIVENFEEPDEFDGYPEKNL 396
+ RGK LGE ++ + K S+ + ++ L S+L +NF +P DG PE
Sbjct: 493 ENRGKILGERPLDRSTKSSSSSFP---AKEAIQLQSNL----ADNFVKPISLDGLPEYEK 545
Query: 397 PKKHPEFMRAR 429
P ++ +AR
Sbjct: 546 PFRNDPAKQAR 556
>01_06_1775 - 39808794-39808919,39809021-39809127,39810594-39812178
Length = 605
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 13 YSQDYRVNAERAKRELDGKMRNGRTLRVRFA 105
+S +Y A+ AK +DGK+ GR LR+ FA
Sbjct: 548 FSNEYE--AKCAKDAMDGKVMLGRPLRISFA 576
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,192,886
Number of Sequences: 37544
Number of extensions: 328217
Number of successful extensions: 952
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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