Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_I21
(364 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 115 1e-26
03_01_0547 + 4093196-4093657,4094267-4095148 115 1e-26
03_01_0544 + 4082528-4082989,4083585-4084466 115 1e-26
03_01_0543 + 4076981-4077442,4078145-4079026 115 1e-26
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 71 3e-13
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 71 3e-13
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 54 3e-08
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 49 1e-06
02_04_0462 + 23131433-23132836 46 7e-06
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 46 1e-05
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 40 8e-04
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 38 0.002
03_05_0511 + 25056018-25059107 36 0.013
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 35 0.017
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 35 0.017
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 35 0.017
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 31 0.21
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 31 0.21
04_01_0103 + 1082077-1082167,1083037-1085477 29 0.85
02_04_0017 + 18937774-18937864,18938505-18940945 29 0.85
02_04_0148 - 20198407-20201424 29 1.1
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 29 1.1
01_06_0662 + 30987187-30987277,30987825-30990214 29 1.5
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 27 4.5
12_02_1174 - 26696869-26698191 26 7.9
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 115 bits (276), Expect = 1e-26
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = +1
Query: 55 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVF 234
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWV
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 235 GQTK 246
+ K
Sbjct: 61 DKLK 64
Score = 91.5 bits (217), Expect = 2e-19
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMI 364
LDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMI
Sbjct: 60 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMI 103
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 115 bits (276), Expect = 1e-26
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = +1
Query: 55 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVF 234
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWV
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 235 GQTK 246
+ K
Sbjct: 61 DKLK 64
Score = 91.5 bits (217), Expect = 2e-19
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMI 364
LDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMI
Sbjct: 60 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMI 103
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 115 bits (276), Expect = 1e-26
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = +1
Query: 55 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVF 234
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWV
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 235 GQTK 246
+ K
Sbjct: 61 DKLK 64
Score = 91.5 bits (217), Expect = 2e-19
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMI 364
LDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMI
Sbjct: 60 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMI 103
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 115 bits (276), Expect = 1e-26
Identities = 53/64 (82%), Positives = 55/64 (85%)
Frame = +1
Query: 55 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVF 234
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWV
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 235 GQTK 246
+ K
Sbjct: 61 DKLK 64
Score = 91.5 bits (217), Expect = 2e-19
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMI 364
LDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMI
Sbjct: 60 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMI 103
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 70.9 bits (166), Expect = 3e-13
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = +1
Query: 76 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVFGQT 243
+N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW ++
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDES 303
Score = 55.6 bits (128), Expect = 1e-08
Identities = 22/44 (50%), Positives = 33/44 (75%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMI 364
+D+ ERERG+T+ +A+ ET KY V ++D+PGH+DF+ NMI
Sbjct: 300 MDESSEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMI 343
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 70.9 bits (166), Expect = 3e-13
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = +1
Query: 76 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVFGQT 243
+N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW ++
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDES 303
Score = 55.6 bits (128), Expect = 1e-08
Identities = 22/44 (50%), Positives = 33/44 (75%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMI 364
+D+ ERERG+T+ +A+ ET KY V ++D+PGH+DF+ NMI
Sbjct: 300 MDESSEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMI 343
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 54.4 bits (125), Expect = 3e-08
Identities = 21/44 (47%), Positives = 33/44 (75%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMI 364
+D+ ERERGIT+ + + F+T Y+V ++D+PGH+DF+ NMI
Sbjct: 287 MDESADERERGITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMI 330
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 48.8 bits (111), Expect = 1e-06
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMI 364
+DK E+ RGITI A ++ET K + +D PGH D++KNMI
Sbjct: 105 IDKAPEEKARGITIATAHVEYETAKRHYAHVDCPGHADYVKNMI 148
Score = 34.3 bits (75), Expect = 0.030
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 61 KEKVHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 210
+ K H+N+ IGHVD GK+T T ++ + G ++ +K +E +G
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARG 115
>02_04_0462 + 23131433-23132836
Length = 467
Score = 46.4 bits (105), Expect = 7e-06
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMI 364
+D ER RGITI+ A ++ET + +D PGH D++KNMI
Sbjct: 108 IDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMI 151
Score = 37.1 bits (82), Expect = 0.004
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 52 KMGKEKVHINIVVIGHVDSGKSTTTGHL---IYKCGGIDKRTIEKFEKEAQEMGKG 210
K + K H+NI IGHVD GK+T T L + GG + ++ + +E +G
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARG 118
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 45.6 bits (103), Expect = 1e-05
Identities = 18/43 (41%), Positives = 31/43 (72%)
Frame = +1
Query: 103 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 231
D+GKST G +++ G +D RTI+K+EKEA++ + S+ A++
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYI 46
Score = 35.5 bits (78), Expect = 0.013
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAP----GHRDFIKNMI 364
+D + ER +G T+++ FET TI+DAP GH+ ++ NMI
Sbjct: 47 MDTNEEERLKGKTVEVGRAHFETETTRFTILDAPVKMKGHKSYVPNMI 94
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 39.5 bits (88), Expect = 8e-04
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDF 349
+D + ERE+GITI A Y V IID PGH DF
Sbjct: 111 MDSMDLEREKGITIQSAATYCTWNGYQVNIIDTPGHVDF 149
Score = 29.5 bits (63), Expect = 0.85
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 79 NIVVIGHVDSGKSTTTGHLIYKCGGI 156
NI + H+DSGK+T T ++Y G I
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRI 95
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 37.9 bits (84), Expect = 0.002
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +2
Query: 260 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMI 364
+G T+++ FET TI+DAPGH+ ++ NMI
Sbjct: 15 KGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMI 49
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 35.5 bits (78), Expect = 0.013
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 224 LGYLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDF 349
L ++D L E+ R IT+ A G + V +ID+PGH DF
Sbjct: 47 LRFMDYLDEEQRRAITMKSAAVVLHHGGHRVNLIDSPGHIDF 88
Score = 31.9 bits (69), Expect = 0.16
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 79 NIVVIGHVDSGKSTTTGHLIYKCG 150
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 35.1 bits (77), Expect = 0.017
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDF 349
+D ++ E+ERGITI K+ + IID PGH DF
Sbjct: 144 MDWMEQEQERGITITSPPTTAFWNKHRINIIDTPGHVDF 182
Score = 30.7 bits (66), Expect = 0.37
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +1
Query: 73 HINIVVIGHVDSGKSTTTGHLIYKCG 150
HI+ V++ H+D+GK+TTT ++Y G
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTG 129
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 35.1 bits (77), Expect = 0.017
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +2
Query: 230 YLDKLKAERERGITIDIAL----WKFETGKYYVTIIDAPGHRDF 349
+LD + ERERGITI + + Y + +ID PGH DF
Sbjct: 113 FLDNMDLERERGITIKLQAARMRYIMNDEPYCLNLIDTPGHVDF 156
Score = 29.9 bits (64), Expect = 0.64
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 79 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 177
N +I H+D GKST L+ G + KR +++
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKREMKQ 111
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 35.1 bits (77), Expect = 0.017
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDF 349
+D + ERERGITI + + + ++D PGH DF
Sbjct: 98 MDSISLERERGITIASKVTSVSWKENELNMVDTPGHADF 136
Score = 31.5 bits (68), Expect = 0.21
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 79 NIVVIGHVDSGKSTTTGHLIYKCG 150
N+ VI HVD GK+T L+ +CG
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG 89
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 31.5 bits (68), Expect = 0.21
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 15/55 (27%)
Frame = +2
Query: 230 YLDKLKAERERGITIDI---------------ALWKFETGKYYVTIIDAPGHRDF 349
YLDKL+ ERERGIT+ A + + Y + +ID PGH DF
Sbjct: 93 YLDKLQVERERGITVKAQTATMFYRHANNQLPASDQPDAPSYLLNLIDTPGHVDF 147
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 79 NIVVIGHVDSGKSTTTGHLIYKCGGIDK 162
N +I HVD GKST L+ G I K
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK 86
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 31.5 bits (68), Expect = 0.21
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDF 349
+D ERERGITI + IID PGH DF
Sbjct: 157 MDSNDLERERGITILSKNTSITYKGTKINIIDTPGHSDF 195
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 29.5 bits (63), Expect = 0.85
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 55 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 150
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 29.5 bits (63), Expect = 0.85
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 55 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 150
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 79 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 201
N ++ HVD GK++ HLI G ++R E+ A+ M
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS-ERRVSERMAGSARVM 57
Score = 28.7 bits (61), Expect = 1.5
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Frame = +2
Query: 233 LDKLKAERERGITI---DIALWKF--ETGKYYVTIIDAPGHRDF 349
+D L+ E+ R IT+ IAL + + G + V +ID+PGH DF
Sbjct: 57 MDHLEEEQRRAITMKSASIALRRGGEDGGGHRVHLIDSPGHIDF 100
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 29.1 bits (62), Expect = 1.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 79 NIVVIGHVDSGKSTTTGHLIYKCG 150
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 79 NIVVIGHVDSGKSTTTGHLIYKCG 150
N+ V+ HVD GKST T L+ G
Sbjct: 21 NMSVVAHVDHGKSTLTDSLVAAAG 44
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 67 KVHINIVVIGHVDSG 111
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>12_02_1174 - 26696869-26698191
Length = 440
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 160 KRTIEKFEKEAQEMGK 207
KR EK EKEAQEMG+
Sbjct: 371 KRKEEKREKEAQEMGR 386
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,270,497
Number of Sequences: 37544
Number of extensions: 206572
Number of successful extensions: 656
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 566473892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -