Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_I21
(364 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 132 1e-31
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 132 1e-31
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 132 1e-31
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 132 1e-31
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 132 1e-31
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 75 2e-14
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 75 2e-14
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 72 1e-13
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 47 5e-06
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 47 5e-06
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 47 5e-06
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 46 8e-06
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 46 8e-06
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 43 6e-05
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 37 0.004
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 35 0.020
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 32 0.11
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 32 0.11
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 31 0.19
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 31 0.19
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 31 0.19
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 31 0.19
Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical pr... 30 0.57
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 1.3
AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical ... 28 2.3
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 27 4.0
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 27 4.0
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z69634-2|CAA93451.2| 926|Caenorhabditis elegans Hypothetical pr... 27 5.3
AL132863-4|CAB60575.1| 410|Caenorhabditis elegans Hypothetical ... 27 5.3
AC024830-1|AAF59605.1| 256|Caenorhabditis elegans Hypothetical ... 27 5.3
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 26 7.0
U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical pr... 26 7.0
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 26 7.0
AF040654-3|AAK21451.2| 445|Caenorhabditis elegans Hypothetical ... 26 7.0
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 132 bits (318), Expect = 1e-31
Identities = 60/64 (93%), Positives = 61/64 (95%)
Frame = +1
Query: 55 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVF 234
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 235 GQTK 246
+ K
Sbjct: 61 DKLK 64
Score = 94.3 bits (224), Expect = 2e-20
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMI 364
LDKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMI
Sbjct: 60 LDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMI 103
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 132 bits (318), Expect = 1e-31
Identities = 60/64 (93%), Positives = 61/64 (95%)
Frame = +1
Query: 55 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVF 234
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 235 GQTK 246
+ K
Sbjct: 61 DKLK 64
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 132 bits (318), Expect = 1e-31
Identities = 60/64 (93%), Positives = 61/64 (95%)
Frame = +1
Query: 55 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVF 234
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 235 GQTK 246
+ K
Sbjct: 61 DKLK 64
Score = 94.3 bits (224), Expect = 2e-20
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMI 364
LDKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMI
Sbjct: 60 LDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMI 103
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 132 bits (318), Expect = 1e-31
Identities = 60/64 (93%), Positives = 61/64 (95%)
Frame = +1
Query: 55 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVF 234
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 235 GQTK 246
+ K
Sbjct: 61 DKLK 64
Score = 94.3 bits (224), Expect = 2e-20
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMI 364
LDKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMI
Sbjct: 60 LDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMI 103
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 132 bits (318), Expect = 1e-31
Identities = 60/64 (93%), Positives = 61/64 (95%)
Frame = +1
Query: 55 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVF 234
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 235 GQTK 246
+ K
Sbjct: 61 DKLK 64
Score = 94.3 bits (224), Expect = 2e-20
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMI 364
LDKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMI
Sbjct: 60 LDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMI 103
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 74.9 bits (176), Expect = 2e-14
Identities = 32/61 (52%), Positives = 44/61 (72%)
Frame = +1
Query: 64 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVFGQT 243
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWV +T
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 244 K 246
+
Sbjct: 227 E 227
Score = 57.6 bits (133), Expect = 2e-09
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMI 364
LD+ + ERERG+T+DI FET + ++DAPGH+DFI NMI
Sbjct: 223 LDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMI 266
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 74.9 bits (176), Expect = 2e-14
Identities = 32/61 (52%), Positives = 44/61 (72%)
Frame = +1
Query: 64 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVFGQT 243
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWV +T
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 244 K 246
+
Sbjct: 245 E 245
Score = 57.6 bits (133), Expect = 2e-09
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMI 364
LD+ + ERERG+T+DI FET + ++DAPGH+DFI NMI
Sbjct: 241 LDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMI 284
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 72.1 bits (169), Expect = 1e-13
Identities = 30/57 (52%), Positives = 43/57 (75%)
Frame = +1
Query: 58 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAW 228
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSW 160
Score = 49.6 bits (113), Expect = 7e-07
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMI 364
+D ERE+G T+++ FET K + TI+DAPGH+ F+ NMI
Sbjct: 162 MDTNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMI 205
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 46.8 bits (106), Expect = 5e-06
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMI 364
+D E+ RGITI+ ++ET K + ID PGH D+IKNMI
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMI 130
Score = 34.7 bits (76), Expect = 0.020
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +1
Query: 61 KEKVHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 210
++K H+N+ IGHVD GK+T T ++ G R E + +E +G
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARG 97
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 46.8 bits (106), Expect = 5e-06
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMI 364
+D E+ RGITI+ ++ET K + ID PGH D+IKNMI
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMI 131
Score = 34.7 bits (76), Expect = 0.020
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +1
Query: 61 KEKVHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 210
++K H+N+ IGHVD GK+T T ++ G R E + +E +G
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARG 98
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 46.8 bits (106), Expect = 5e-06
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMI 364
+D E+ RGITI+ ++ET K + ID PGH D+IKNMI
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMI 131
Score = 34.7 bits (76), Expect = 0.020
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +1
Query: 61 KEKVHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 210
++K H+N+ IGHVD GK+T T ++ G R E + +E +G
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARG 98
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 46.0 bits (104), Expect = 8e-06
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMI 364
+DK K E++RGITI++A +E+ + D PGH DFIKNMI
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMI 126
Score = 30.3 bits (65), Expect = 0.43
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 67 KVHINIVVIGHVDSGKSTTT 126
K+++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 46.0 bits (104), Expect = 8e-06
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMI 364
+DK K E++RGITI++A +E+ + D PGH DFIKNMI
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMI 126
Score = 30.3 bits (65), Expect = 0.43
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 67 KVHINIVVIGHVDSGKSTTT 126
K+++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 43.2 bits (97), Expect = 6e-05
Identities = 21/47 (44%), Positives = 25/47 (53%)
Frame = +2
Query: 209 VPSNTLGYLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDF 349
VP LDKL+ ERERGIT+ Y + +ID PGH DF
Sbjct: 69 VPPGQKQMLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDF 115
Score = 32.3 bits (70), Expect = 0.11
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 79 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 195
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 37.1 bits (82), Expect = 0.004
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +2
Query: 236 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDF 349
D L ERERGIT+ A + + + +ID PGH DF
Sbjct: 66 DFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDF 103
Score = 34.3 bits (75), Expect = 0.027
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 79 NIVVIGHVDSGKSTTTGHLIYKCGGI 156
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 34.7 bits (76), Expect = 0.020
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 233 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDF 349
+D + ER+RGITI A + + IID PGH DF
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDF 125
Score = 33.1 bits (72), Expect = 0.061
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 79 NIVVIGHVDSGKSTTTGHLIYKCGGID 159
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 32.3 bits (70), Expect = 0.11
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 34 VIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY 141
+IRD P K+ + + V+G+VD+GKST G L +
Sbjct: 128 IIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 32.3 bits (70), Expect = 0.11
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 34 VIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY 141
+IRD P K+ + + V+G+VD+GKST G L +
Sbjct: 128 IIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 31.5 bits (68), Expect = 0.19
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 224 LGYLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDF 349
L Y+D + E+ RGIT+ + + +ID+PGH DF
Sbjct: 55 LRYMDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDF 96
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 31.5 bits (68), Expect = 0.19
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 224 LGYLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDF 349
L Y+D + E+ RGIT+ + + +ID+PGH DF
Sbjct: 55 LRYMDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDF 96
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 31.5 bits (68), Expect = 0.19
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 79 NIVVIGHVDSGKSTTTGHLIYKCG 150
N+ VI HVD GKST T L+ K G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAG 44
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 31.5 bits (68), Expect = 0.19
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 79 NIVVIGHVDSGKSTTTGHLIYKCG 150
N+ VI HVD GKST T L+ K G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAG 44
>Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical
protein ZK20.1 protein.
Length = 420
Score = 29.9 bits (64), Expect = 0.57
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 334 RSVDDGDIVFAGFELPESNIDGDTTLTLGL 245
R ++DGDIV + F+ P I D T++L L
Sbjct: 260 RFIEDGDIVSSFFDRPSIRIQSDNTVSLRL 289
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 1.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 76 INIVVIGHVDSGKSTTT 126
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 1.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 76 INIVVIGHVDSGKSTTT 126
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical
protein Y32F6B.1 protein.
Length = 758
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 263 HAHARPLVCPNTQAYLKEPLPISWASFSNF-SMVRL 159
H H +C N + Y+ E PI+ A SN +MV L
Sbjct: 165 HYHKGSEICKNLEKYIAEKFPITDAKMSNVRAMVAL 200
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 4.0
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 49 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 207
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 4.0
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 49 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 207
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical
protein C46C2.1b protein.
Length = 1677
Score = 27.1 bits (57), Expect = 4.0
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 154 IDKRTIEKFEKEAQEMGKGSFKYAWVFGQTK-GRA*AWYHHRYCSLEVRNRQ 306
IDK +F K +E+G+GSFK + T+ G A AW + L RQ
Sbjct: 323 IDKSKNGRFLKFDEELGRGSFKTVFRGLDTETGVAVAWCELQESKLNKTERQ 374
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical
protein C46C2.1a protein.
Length = 1838
Score = 27.1 bits (57), Expect = 4.0
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 154 IDKRTIEKFEKEAQEMGKGSFKYAWVFGQTK-GRA*AWYHHRYCSLEVRNRQ 306
IDK +F K +E+G+GSFK + T+ G A AW + L RQ
Sbjct: 323 IDKSKNGRFLKFDEELGRGSFKTVFRGLDTETGVAVAWCELQESKLNKTERQ 374
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.1 bits (57), Expect = 4.0
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 49 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 207
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 31 IVIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKC 147
+++R P+ ++ + + + V+G D GKST G L C
Sbjct: 155 VLVRKVPE-SQQFIEVRLAVVGGCDVGKSTLCGVLTQGC 192
>Z69634-2|CAA93451.2| 926|Caenorhabditis elegans Hypothetical
protein B0001.2 protein.
Length = 926
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/47 (25%), Positives = 19/47 (40%)
Frame = +2
Query: 149 VVSTNVPSKSSRRKPRKWVRVPSNTLGYLDKLKAERERGITIDIALW 289
+V T P R P + + +KL + RG+ I I +W
Sbjct: 559 IVETYFPQSGERLNPETYHSFIGKIVDKFNKLPEDCSRGVKISIKMW 605
>AL132863-4|CAB60575.1| 410|Caenorhabditis elegans Hypothetical
protein Y37H2A.6 protein.
Length = 410
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 37 IRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY-KCGGIDKRTIEKFEKEAQEMGK 207
IR+ K+GK K+ + ++ D GKS +L + G D +F+ ++GK
Sbjct: 11 IREAWKLGKNKIFLRACILYEYDQGKSVYESYLSFCDAVGDDFMEYREFDFWYYKLGK 68
>AC024830-1|AAF59605.1| 256|Caenorhabditis elegans Hypothetical
protein Y55F3BR.5 protein.
Length = 256
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +2
Query: 146 AVVSTNVPSKSSRRKPRKWVRVPSNTLGYLDKLKAERERGITIDI 280
AV+ + R+ P K+ + + +G+LDK ER+ + I
Sbjct: 204 AVIDKKSEDTTKRQIPAKYSDIVEHLIGFLDKTPRERQMEVKCKI 248
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 26.2 bits (55), Expect = 7.0
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = +2
Query: 230 YLDKLKAERERGITI-----DIALWKFETGKYYVTIIDAPGHRDFIKNM 361
+ D L E++RG +I I + Y + IID PGH +F M
Sbjct: 170 FTDILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEM 218
>U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical
protein C01G5.4 protein.
Length = 1079
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 107 PASPQQLVT*STNAVVSTNVPSKSS 181
P+SPQQL NA STNV + S
Sbjct: 120 PSSPQQLHLAFANATTSTNVTNAKS 144
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 26.2 bits (55), Expect = 7.0
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = +2
Query: 230 YLDKLKAERERGITI-----DIALWKFETGKYYVTIIDAPGHRDFIKNM 361
+ D L E++RG +I I + Y + IID PGH +F M
Sbjct: 45 FTDILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEM 93
>AF040654-3|AAK21451.2| 445|Caenorhabditis elegans Hypothetical
protein R06B10.5 protein.
Length = 445
Score = 26.2 bits (55), Expect = 7.0
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Frame = +2
Query: 164 VPSKSSRRKPRKWVRVPSNTLGYLDK----LKAERERGITIDI--ALWKFETGKYY 313
+ SK RR+ +KW+++ N ++D+ +K +GI + WK+ +G Y
Sbjct: 137 IDSKILRRREKKWIQMLDNWRYFMDEKFELVKNRCRKGIPPSLRGRAWKYLSGATY 192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,629,668
Number of Sequences: 27780
Number of extensions: 170460
Number of successful extensions: 586
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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