Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_I20
(183 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 0.59
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 0.59
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 1.4
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 1.8
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 1.8
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 20 2.4
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 20 2.4
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 20 2.4
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 20 2.4
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 20 2.4
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 20 3.1
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 20 3.1
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 19 4.1
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 19 7.2
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 19 7.2
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 18 9.5
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 18 9.5
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 18 9.5
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 0.59
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = -2
Query: 140 LINSDTQDTINYI--YSSKKLFFNYFQI 63
+I+S+ + NY Y+SKKL++N I
Sbjct: 303 IISSNNYNYKNYNNNYNSKKLYYNIINI 330
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 0.59
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = -2
Query: 140 LINSDTQDTINYI--YSSKKLFFNYFQI 63
+I+S+ + NY Y+SKKL++N I
Sbjct: 314 IISSNNYNYKNYNNNYNSKKLYYNIINI 341
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 1.4
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 155 NFRNLLINSDTQDTINYIYSSKKLFFNYFQI 63
N+ N N++ + NY + KKL++N I
Sbjct: 332 NYNNNNYNNNNYNN-NYNNNCKKLYYNIINI 361
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.6 bits (41), Expect = 1.8
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 155 NFRNLLINSDTQDTINYIYSSKKLFFNY 72
N+ N N + NY + KKL+ NY
Sbjct: 93 NYNNYNNNYNNNYNNNYNNNYKKLYKNY 120
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.6 bits (41), Expect = 1.8
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 155 NFRNLLINSDTQDTINYIYSSKKLFFNY 72
N+ N N + NY + KKL+ NY
Sbjct: 93 NYNNYNNNYNNNYNNNYNNNYKKLYKNY 120
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 20.2 bits (40), Expect = 2.4
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 109 IISTLLKNYFSIISKF 62
IIS+L NY S IS +
Sbjct: 81 IISSLSNNYISNISNY 96
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 20.2 bits (40), Expect = 2.4
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 109 IISTLLKNYFSIISKF 62
IIS+L NY S IS +
Sbjct: 81 IISSLSNNYISNISNY 96
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 20.2 bits (40), Expect = 2.4
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -2
Query: 140 LINSDTQDTINYIYSSKKLFFNYFQI 63
+I+S + +TI+ +KKL++N I
Sbjct: 314 IISSLSNNTIHNNNYNKKLYYNIINI 339
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.2 bits (40), Expect = 2.4
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -2
Query: 140 LINSDTQDTINYIYSSKKLFFNYFQI 63
L N + NY +KKL++N I
Sbjct: 318 LSNKTIHNNNNYKNYNKKLYYNIINI 343
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 20.2 bits (40), Expect = 2.4
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 109 IISTLLKNYFSIISKF 62
IIS+L NY S IS +
Sbjct: 319 IISSLSNNYISNISNY 334
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -2
Query: 146 NLLINSDTQDTINYIYSSKKLFFN 75
N I+++ NY + KKL++N
Sbjct: 87 NKTIHNNNNYKYNYNNNCKKLYYN 110
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 19.8 bits (39), Expect = 3.1
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -2
Query: 149 RNLLINSDTQDTINYIYSSKKLFFNYFQ 66
++++ + D Q T+N IY+ + F YF+
Sbjct: 515 QSIIESPDKQLTLNEIYNWFQNTFCYFR 542
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 19.4 bits (38), Expect = 4.1
Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = -2
Query: 140 LINSDTQDTINYI-YSSKKLFFN 75
L N + NY Y++KKL++N
Sbjct: 307 LSNKTIHNNNNYNNYNNKKLYYN 329
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 18.6 bits (36), Expect = 7.2
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 72 FPNSFTILINY 40
FP++ ILINY
Sbjct: 11 FPSTSFILINY 21
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 18.6 bits (36), Expect = 7.2
Identities = 5/8 (62%), Positives = 7/8 (87%)
Frame = +3
Query: 114 CILCIRVY 137
C++C RVY
Sbjct: 38 CVICERVY 45
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 18.2 bits (35), Expect = 9.5
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = -2
Query: 179 LFLIREI*NFRNLLINSDTQDTI 111
+FLI + NFR ++ D + +
Sbjct: 131 IFLIDIVVNFRTGIMQQDNAEQV 153
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 18.2 bits (35), Expect = 9.5
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = -2
Query: 179 LFLIREI*NFRNLLINSDTQDTI 111
+FLI + NFR ++ D + +
Sbjct: 131 IFLIDIVVNFRTGIMQQDNAEQV 153
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 18.2 bits (35), Expect = 9.5
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = -2
Query: 179 LFLIREI*NFRNLLINSDTQDTI 111
+FLI + NFR ++ D + +
Sbjct: 131 IFLIDIVVNFRTGIMQQDNAEQV 153
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,947
Number of Sequences: 438
Number of extensions: 791
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 40
effective length of database: 128,823
effective search space used: 2576460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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