Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_I19
(620 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 311 2e-84
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 310 2e-84
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 310 2e-84
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 310 2e-84
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 310 2e-84
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 308 8e-84
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 307 2e-83
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 194 2e-49
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 150 4e-36
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 100 5e-21
BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining re... 32 1.4
AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein. 32 1.4
L07810-1|AAA02806.1| 126|Homo sapiens dynamin protein. 30 5.7
L07809-1|AAA02805.1| 131|Homo sapiens dynamin protein. 30 5.7
L07807-1|AAA02803.1| 864|Homo sapiens dynamin protein. 30 5.7
BC063850-1|AAH63850.1| 851|Homo sapiens dynamin 1 protein. 30 5.7
AL590708-18|CAI13837.1| 864|Homo sapiens dynamin 1 protein. 30 5.7
AL590708-17|CAI13839.2| 851|Homo sapiens dynamin 1 protein. 30 5.7
U31659-1|AAA84390.1| 677|Homo sapiens TAFII80 protein. 30 7.6
L25444-1|AAA63643.1| 677|Homo sapiens TAFII70 protein. 30 7.6
BC150245-1|AAI50246.1| 1379|Homo sapiens KIAA0774 protein. 30 7.6
BC018115-1|AAH18115.1| 677|Homo sapiens TAF6 RNA polymerase II,... 30 7.6
AY149894-1|AAN10295.1| 677|Homo sapiens TAF6 RNA polymerase II,... 30 7.6
AL607144-1|CAI40565.1| 1163|Homo sapiens KIAA0774 protein. 30 7.6
AL596114-1|CAI39910.1| 1163|Homo sapiens KIAA0774 protein. 30 7.6
AL596092-1|CAI40386.1| 1163|Homo sapiens KIAA0774 protein. 30 7.6
AL160255-1|CAI41204.1| 1163|Homo sapiens KIAA0774 protein. 30 7.6
AB018317-1|BAA34494.2| 1381|Homo sapiens KIAA0774 protein protein. 30 7.6
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 311 bits (763), Expect = 2e-84
Identities = 138/203 (67%), Positives = 165/203 (81%)
Frame = -2
Query: 619 TPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXX 440
TPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 46 TPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLL 105
Query: 439 XXXXXXXXXLDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 260
+D +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KG
Sbjct: 106 ARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 165
Query: 259 AVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQEDEDSFKRQFGK 80
AVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L +EDED++K+QF +
Sbjct: 166 AVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRCLMEEDEDAYKKQFSQ 225
Query: 79 YIKIGVNPDDIETNYKKAHEAIR 11
YIK V PD +E YKKAH AIR
Sbjct: 226 YIKNSVTPDMMEEMYKKAHAAIR 248
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 310 bits (762), Expect = 2e-84
Identities = 138/203 (67%), Positives = 165/203 (81%)
Frame = -2
Query: 619 TPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXX 440
TPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 46 TPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLL 105
Query: 439 XXXXXXXXXLDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 260
+D +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KG
Sbjct: 106 ARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 165
Query: 259 AVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQEDEDSFKRQFGK 80
AVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L +EDED++K+QF +
Sbjct: 166 AVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQ 225
Query: 79 YIKIGVNPDDIETNYKKAHEAIR 11
YIK V PD +E YKKAH AIR
Sbjct: 226 YIKNSVTPDMMEEMYKKAHAAIR 248
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 310 bits (762), Expect = 2e-84
Identities = 138/203 (67%), Positives = 165/203 (81%)
Frame = -2
Query: 619 TPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXX 440
TPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 46 TPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLL 105
Query: 439 XXXXXXXXXLDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 260
+D +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KG
Sbjct: 106 ARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 165
Query: 259 AVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQEDEDSFKRQFGK 80
AVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L +EDED++K+QF +
Sbjct: 166 AVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQ 225
Query: 79 YIKIGVNPDDIETNYKKAHEAIR 11
YIK V PD +E YKKAH AIR
Sbjct: 226 YIKNSVTPDMMEEMYKKAHAAIR 248
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 310 bits (762), Expect = 2e-84
Identities = 138/203 (67%), Positives = 165/203 (81%)
Frame = -2
Query: 619 TPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXX 440
TPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 46 TPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLL 105
Query: 439 XXXXXXXXXLDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 260
+D +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KG
Sbjct: 106 ARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 165
Query: 259 AVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQEDEDSFKRQFGK 80
AVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L +EDED++K+QF +
Sbjct: 166 AVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQ 225
Query: 79 YIKIGVNPDDIETNYKKAHEAIR 11
YIK V PD +E YKKAH AIR
Sbjct: 226 YIKNSVTPDMMEEMYKKAHAAIR 248
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 310 bits (762), Expect = 2e-84
Identities = 138/203 (67%), Positives = 165/203 (81%)
Frame = -2
Query: 619 TPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXX 440
TPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 46 TPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLL 105
Query: 439 XXXXXXXXXLDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 260
+D +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KG
Sbjct: 106 ARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 165
Query: 259 AVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQEDEDSFKRQFGK 80
AVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L +EDED++K+QF +
Sbjct: 166 AVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQ 225
Query: 79 YIKIGVNPDDIETNYKKAHEAIR 11
YIK V PD +E YKKAH AIR
Sbjct: 226 YIKNSVTPDMMEEMYKKAHAAIR 248
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 308 bits (757), Expect = 8e-84
Identities = 137/203 (67%), Positives = 164/203 (80%)
Frame = -2
Query: 619 TPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXX 440
TPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 46 TPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLL 105
Query: 439 XXXXXXXXXLDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 260
+D +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KG
Sbjct: 106 ARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 165
Query: 259 AVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQEDEDSFKRQFGK 80
AVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L +EDED++K+QF +
Sbjct: 166 AVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQ 225
Query: 79 YIKIGVNPDDIETNYKKAHEAIR 11
YIK V PD +E YKKAH AIR
Sbjct: 226 YIKNSVTPDMMEEMYKKAHAAIR 248
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 307 bits (754), Expect = 2e-83
Identities = 138/203 (67%), Positives = 165/203 (81%)
Frame = -2
Query: 619 TPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXX 440
TPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 53 TPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLL 112
Query: 439 XXXXXXXXXLDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 260
+D +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KG
Sbjct: 113 ARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 172
Query: 259 AVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQEDEDSFKRQFGK 80
AVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L +EDED++K+QF +
Sbjct: 173 AVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQ 232
Query: 79 YIKIGVNPDDIETNYKKAHEAIR 11
YIK V P D+E YKKAH AIR
Sbjct: 233 YIKNSVTP-DMEEMYKKAHAAIR 254
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 194 bits (473), Expect = 2e-49
Identities = 84/125 (67%), Positives = 101/125 (80%)
Frame = -2
Query: 604 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXX 425
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 424 XXXXLDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 245
+D +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 244 LNVPH 230
L++PH
Sbjct: 121 LSIPH 125
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 150 bits (363), Expect = 4e-36
Identities = 67/96 (69%), Positives = 81/96 (84%)
Frame = -2
Query: 298 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLE 119
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLM 60
Query: 118 QEDEDSFKRQFGKYIKIGVNPDDIETNYKKAHEAIR 11
+EDED++K+QF +YIK V PD +E YKKAH AIR
Sbjct: 61 EEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIR 96
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 100 bits (239), Expect = 5e-21
Identities = 41/53 (77%), Positives = 51/53 (96%)
Frame = -2
Query: 619 TPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAA 461
TPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAA
Sbjct: 46 TPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98
>BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining
region Y)-box 30 protein.
Length = 753
Score = 32.3 bits (70), Expect = 1.4
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 186 NFLDSASYPGNLLIECGTFKPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTL 365
N + S++ + T +PP ++P R+ + +A P H+ P PL +TL
Sbjct: 544 NRISSSASTAHARFATSTIQPPREYSSVSPCPRSAPIPQASPIPHPHVYQPPPLGHPATL 603
Query: 366 YSSP 377
+ +P
Sbjct: 604 FGTP 607
>AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein.
Length = 753
Score = 32.3 bits (70), Expect = 1.4
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 186 NFLDSASYPGNLLIECGTFKPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTL 365
N + S++ + T +PP ++P R+ + +A P H+ P PL +TL
Sbjct: 544 NRISSSASTAHARFATSTIQPPREYSSVSPCPRSAPIPQASPIPHPHVYQPPPLGHPATL 603
Query: 366 YSSP 377
+ +P
Sbjct: 604 FGTP 607
>L07810-1|AAA02806.1| 126|Homo sapiens dynamin protein.
Length = 126
Score = 30.3 bits (65), Expect = 5.7
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 243 KPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 395
+ P+++P P RAP V A+P S+ APGP GS L +P P
Sbjct: 48 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAPPVPSRP 94
>L07809-1|AAA02805.1| 131|Homo sapiens dynamin protein.
Length = 131
Score = 30.3 bits (65), Expect = 5.7
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 243 KPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 395
+ P+++P P RAP V A+P S+ APGP GS L +P P
Sbjct: 48 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAPPVPSRP 94
>L07807-1|AAA02803.1| 864|Homo sapiens dynamin protein.
Length = 864
Score = 30.3 bits (65), Expect = 5.7
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 243 KPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 395
+ P+++P P RAP V A+P S+ APGP GS L +P P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAPPVPSRP 819
>BC063850-1|AAH63850.1| 851|Homo sapiens dynamin 1 protein.
Length = 851
Score = 30.3 bits (65), Expect = 5.7
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 243 KPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 395
+ P+++P P RAP V A+P S+ APGP GS L +P P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAPPVPSRP 819
>AL590708-18|CAI13837.1| 864|Homo sapiens dynamin 1 protein.
Length = 864
Score = 30.3 bits (65), Expect = 5.7
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 243 KPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 395
+ P+++P P RAP V A+P S+ APGP GS L +P P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAPPVPSRP 819
>AL590708-17|CAI13839.2| 851|Homo sapiens dynamin 1 protein.
Length = 851
Score = 30.3 bits (65), Expect = 5.7
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 243 KPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 395
+ P+++P P RAP V A+P S+ APGP GS L +P P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAPPVPSRP 819
>U31659-1|AAA84390.1| 677|Homo sapiens TAFII80 protein.
Length = 677
Score = 29.9 bits (64), Expect = 7.6
Identities = 28/95 (29%), Positives = 42/95 (44%)
Frame = +3
Query: 141 ATCSPKMCALCTSALNFLDSASYPGNLLIECGTFKPPSTAPFMAPNTRAPVVVRAKPTSK 320
+T +P + TS + + P L+ T PPSTAP + + +VV PT +
Sbjct: 557 STSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGE 616
Query: 321 *HLNAPGPLSTGSTLYSSPVTSVAPV*RLSKPSLC 425
GP S S + P +S +P LS +LC
Sbjct: 617 ---GKGGPTSHPSPV-PPPASSPSP---LSGSALC 644
>L25444-1|AAA63643.1| 677|Homo sapiens TAFII70 protein.
Length = 677
Score = 29.9 bits (64), Expect = 7.6
Identities = 28/95 (29%), Positives = 42/95 (44%)
Frame = +3
Query: 141 ATCSPKMCALCTSALNFLDSASYPGNLLIECGTFKPPSTAPFMAPNTRAPVVVRAKPTSK 320
+T +P + TS + + P L+ T PPSTAP + + +VV PT +
Sbjct: 557 STSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGE 616
Query: 321 *HLNAPGPLSTGSTLYSSPVTSVAPV*RLSKPSLC 425
GP S S + P +S +P LS +LC
Sbjct: 617 ---GKGGPTSHPSPV-PPPASSPSP---LSGSALC 644
>BC150245-1|AAI50246.1| 1379|Homo sapiens KIAA0774 protein.
Length = 1379
Score = 29.9 bits (64), Expect = 7.6
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = +3
Query: 273 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 374
P+ ++ +++ ++ +S ++ PGP++T ++LYSS
Sbjct: 789 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 822
>BC018115-1|AAH18115.1| 677|Homo sapiens TAF6 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 80kDa
protein.
Length = 677
Score = 29.9 bits (64), Expect = 7.6
Identities = 28/95 (29%), Positives = 42/95 (44%)
Frame = +3
Query: 141 ATCSPKMCALCTSALNFLDSASYPGNLLIECGTFKPPSTAPFMAPNTRAPVVVRAKPTSK 320
+T +P + TS + + P L+ T PPSTAP + + +VV PT +
Sbjct: 557 STSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGE 616
Query: 321 *HLNAPGPLSTGSTLYSSPVTSVAPV*RLSKPSLC 425
GP S S + P +S +P LS +LC
Sbjct: 617 ---GKGGPTSHPSPV-PPPASSPSP---LSGSALC 644
>AY149894-1|AAN10295.1| 677|Homo sapiens TAF6 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 80kDa
protein.
Length = 677
Score = 29.9 bits (64), Expect = 7.6
Identities = 28/95 (29%), Positives = 42/95 (44%)
Frame = +3
Query: 141 ATCSPKMCALCTSALNFLDSASYPGNLLIECGTFKPPSTAPFMAPNTRAPVVVRAKPTSK 320
+T +P + TS + + P L+ T PPSTAP + + +VV PT +
Sbjct: 557 STSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGE 616
Query: 321 *HLNAPGPLSTGSTLYSSPVTSVAPV*RLSKPSLC 425
GP S S + P +S +P LS +LC
Sbjct: 617 ---GKGGPTSHPSPV-PPPASSPSP---LSGSALC 644
>AL607144-1|CAI40565.1| 1163|Homo sapiens KIAA0774 protein.
Length = 1163
Score = 29.9 bits (64), Expect = 7.6
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = +3
Query: 273 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 374
P+ ++ +++ ++ +S ++ PGP++T ++LYSS
Sbjct: 574 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 607
>AL596114-1|CAI39910.1| 1163|Homo sapiens KIAA0774 protein.
Length = 1163
Score = 29.9 bits (64), Expect = 7.6
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = +3
Query: 273 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 374
P+ ++ +++ ++ +S ++ PGP++T ++LYSS
Sbjct: 574 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 607
>AL596092-1|CAI40386.1| 1163|Homo sapiens KIAA0774 protein.
Length = 1163
Score = 29.9 bits (64), Expect = 7.6
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = +3
Query: 273 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 374
P+ ++ +++ ++ +S ++ PGP++T ++LYSS
Sbjct: 574 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 607
>AL160255-1|CAI41204.1| 1163|Homo sapiens KIAA0774 protein.
Length = 1163
Score = 29.9 bits (64), Expect = 7.6
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = +3
Query: 273 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 374
P+ ++ +++ ++ +S ++ PGP++T ++LYSS
Sbjct: 574 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 607
>AB018317-1|BAA34494.2| 1381|Homo sapiens KIAA0774 protein protein.
Length = 1381
Score = 29.9 bits (64), Expect = 7.6
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = +3
Query: 273 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 374
P+ ++ +++ ++ +S ++ PGP++T ++LYSS
Sbjct: 791 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 824
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,354,930
Number of Sequences: 237096
Number of extensions: 2069591
Number of successful extensions: 9173
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 8846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9172
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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