Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_I17
(544 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 38 0.004
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 37 0.008
Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr... 33 0.13
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 33 0.18
U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical pr... 32 0.31
U39993-2|AAK72059.1| 744|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 29 1.6
U40953-6|AAB52651.1| 809|Caenorhabditis elegans Hypothetical pr... 29 1.6
AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical ... 29 1.6
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF016439-2|AAB65897.1| 176|Caenorhabditis elegans Hypothetical ... 29 2.9
U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical pr... 28 5.0
U00065-2|AAL27237.1| 672|Caenorhabditis elegans Prion-like-(q/n... 28 5.0
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 27 6.6
U46675-3|AAB52643.1| 375|Caenorhabditis elegans Activated in bl... 27 6.6
U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical p... 27 8.7
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical protein
F29G6.1 protein.
Length = 1170
Score = 38.3 bits (85), Expect = 0.004
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 20/99 (20%)
Frame = +3
Query: 237 CINNTGCNSQSASPVCDTDGLTHANPCHL-------MMNGRK---LAYWGECLS-GCS-- 377
C C+ SPVCDT+G+THAN C + M +K ++Y G+C + C
Sbjct: 918 CCRIENCDISVFSPVCDTEGVTHANMCLMDQNACIQMKKNKKTIQVSYQGQCCNQPCDED 977
Query: 378 ----ATGTVCGVNGVTY-ISECAAWA--EHVSVDYSGPC 473
GT+ N + I++C A + +S+ YSG C
Sbjct: 978 KTPVCDGTITHPNICRFRIAQCEAERVNKTLSIAYSGEC 1016
Score = 32.3 bits (70), Expect = 0.23
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 246 NTGCNSQSASPVCDTDGLTHANPCH 320
+T C S SPVCD+ G TH N CH
Sbjct: 815 DTNCPSDF-SPVCDSKGSTHQNICH 838
Score = 32.3 bits (70), Expect = 0.23
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 13/68 (19%)
Frame = +3
Query: 264 QSASPVCDTDGLTHANPC----------HLMMNGRKLAYWGEC--LSGCSATG-TVCGVN 404
+S+ VCD++G TH N C + + + GEC L+ C TG VC
Sbjct: 1025 ESSGAVCDSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGECCALASCPKTGQPVCDSR 1084
Query: 405 GVTYISEC 428
G T+ S C
Sbjct: 1085 GRTHDSLC 1092
Score = 31.5 bits (68), Expect = 0.41
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
Frame = +3
Query: 276 PVCDTDGLTHANPCHLMMNGRK-----LAYWGECL--SGCSATGT-VCGVNGVTYISEC 428
PVC TD +T+ N C L R Y G C C GT +C G T+I++C
Sbjct: 27 PVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCDKKECEKVGTPICDNFGETHINDC 85
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 237 CINNTGCNSQSASPVCDTDGLTHANPCH 320
C + C + +P+CD G TH N CH
Sbjct: 60 CCDKKECE-KVGTPICDNFGETHINDCH 86
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 222 CPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMM 329
C C +N C + PVCDT+G + N C M
Sbjct: 110 CSSKDCNHN--CTNTEFDPVCDTNGSVYRNLCVFQM 143
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 7/49 (14%)
Frame = +3
Query: 390 VCGVNGVTYISECAAWAE-------HVSVDYSGPCLAVGPISDFMEPKC 515
+CG NGVT+ + C+ E + V Y+G C SDF P C
Sbjct: 779 LCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTNCPSDF-SPVC 826
Score = 28.7 bits (61), Expect = 2.9
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 16/77 (20%)
Frame = +3
Query: 246 NTGCNSQSASPVCDTDGLTHANPCHL----------MMNGRKLA--YWGEC--LSGC--S 377
N C + SPVC ++G N C L + G KL Y GEC + C S
Sbjct: 869 NNACPKEY-SPVCASNGQNIVNECELDKIRCLVENNVTTGDKLVKDYDGECCRIENCDIS 927
Query: 378 ATGTVCGVNGVTYISEC 428
VC GVT+ + C
Sbjct: 928 VFSPVCDTEGVTHANMC 944
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = +3
Query: 261 SQSASPVCDTDGLTHANPCHLMM---NGRKL 344
S+ PVCD TH N CH N RKL
Sbjct: 376 SRDVKPVCDEANNTHQNLCHFQQYNCNMRKL 406
Score = 27.9 bits (59), Expect = 5.0
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 9/63 (14%)
Frame = +3
Query: 267 SASPVCDTDGLTHANPCHLMM-------NGRKLAYWGECL-SGC-SATGTVCGVNGVTYI 419
S P+C T+G+T N C L + ++AY G C + C S VC G T+
Sbjct: 775 SYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTNCPSDFSPVCDSKGSTHQ 834
Query: 420 SEC 428
+ C
Sbjct: 835 NIC 837
Score = 27.1 bits (57), Expect = 8.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 264 QSASPVCDTDGLTHANPCH 320
++ PVCD+ G TH + CH
Sbjct: 1075 KTGQPVCDSRGRTHDSLCH 1093
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 37.1 bits (82), Expect = 0.008
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 198 CLSRLQTSCPQHACINNTGCNSQSASPVCDTDGLTHANPCHL 323
C +C AC T CN S P+C +DG+ + N CHL
Sbjct: 668 CACYFGATCHNWACTCPT-CNLSSNYPICGSDGIVYNNQCHL 708
Score = 32.7 bits (71), Expect = 0.18
Identities = 28/98 (28%), Positives = 34/98 (34%), Gaps = 5/98 (5%)
Frame = +3
Query: 237 CINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRK----LAYWGECLSGCSATGTVCGVN 404
C + C SA VC TDG T+ N C L + K + W C G+ C
Sbjct: 317 CKCSEQCTMNSAH-VCGTDGKTYLNECFLKLAACKEQKDILVWKR--GNCDEAGSPCEK- 372
Query: 405 GVTYISECAAWAE-HVSVDYSGPCLAVGPISDFMEPKC 515
EC W V D + C D M P C
Sbjct: 373 -----MECGFWGSCVVKPDRTAECECPNRCEDVMRPVC 405
Score = 30.3 bits (65), Expect = 0.94
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 222 CPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMM 329
CPQ +N+ G + VC +DG T++N C L M
Sbjct: 863 CPQSCNMNHLGIVANMT--VCGSDGTTYSNLCELKM 896
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Frame = +3
Query: 237 CINNTGC----NSQSASPVCDTDGLTHANPCHL 323
C+ T C +S +SPVC + G+ + + CHL
Sbjct: 242 CVCPTQCPNYGDSVESSPVCSSHGVDYQSSCHL 274
Score = 27.5 bits (58), Expect = 6.6
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 264 QSASPVCDTDGLTHANPCHL 323
+ VC TDG+T+++ CH+
Sbjct: 546 EEGKEVCGTDGVTYSSECHM 565
Score = 27.5 bits (58), Expect = 6.6
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3
Query: 390 VCGVNGVTYISEC 428
VCG +GVTY SEC
Sbjct: 551 VCGTDGVTYSSEC 563
>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical
protein C29A12.4 protein.
Length = 1560
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 198 CLSRLQTSCPQHACINNTGCNSQSASPVCDTDGLTH-ANPCHLMMNGRKLAYWGE 359
C S+ +S Q C+N+ C S + P CD H C + N +L + G+
Sbjct: 223 CKSKSMSSREQFVCLNDGECYSSNDGPHCDCQFSDHDGRNCEIEKNDGELTFGGD 277
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 32.7 bits (71), Expect = 0.18
Identities = 28/98 (28%), Positives = 34/98 (34%), Gaps = 5/98 (5%)
Frame = +3
Query: 237 CINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRK----LAYWGECLSGCSATGTVCGVN 404
C + C SA VC TDG T+ N C L + K + W C G+ C
Sbjct: 325 CKCSEQCTMNSAH-VCGTDGKTYLNECFLKLAACKEQKDILVWKR--GNCDEAGSPCEK- 380
Query: 405 GVTYISECAAWAE-HVSVDYSGPCLAVGPISDFMEPKC 515
EC W V D + C D M P C
Sbjct: 381 -----MECGFWGSCVVKPDRTAECECPNRCEDVMRPVC 413
Score = 30.3 bits (65), Expect = 0.94
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 222 CPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMM 329
CPQ +N+ G + VC +DG T++N C L M
Sbjct: 802 CPQSCNMNHLGIVANMT--VCGSDGTTYSNLCELKM 835
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Frame = +3
Query: 237 CINNTGC----NSQSASPVCDTDGLTHANPCHL 323
C+ T C +S +SPVC + G+ + + CHL
Sbjct: 250 CVCPTQCPNYGDSVESSPVCSSHGVDYQSSCHL 282
Score = 27.5 bits (58), Expect = 6.6
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 264 QSASPVCDTDGLTHANPCHL 323
+ VC TDG+T+++ CH+
Sbjct: 554 EEGKEVCGTDGVTYSSECHM 573
Score = 27.5 bits (58), Expect = 6.6
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3
Query: 390 VCGVNGVTYISEC 428
VCG +GVTY SEC
Sbjct: 559 VCGTDGVTYSSEC 571
>U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical
protein F47E1.4 protein.
Length = 728
Score = 31.9 bits (69), Expect = 0.31
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 15/84 (17%)
Frame = +3
Query: 327 MNGRKLAY--WGECLSGCSATGT----VCGVNGVTYISECAAWAEHVSVDYSGP------ 470
+N R+L Y EC S CS VC +G Y S C A + S P
Sbjct: 511 LNSRELNYNFTNECNSQCSCENAHLYPVCSADGTAYFSPCHAGCREATQFGSDPVIGFAS 570
Query: 471 --CLAVGPIS-DFMEPKCTFDRII 533
C+ G +S F + KC F I+
Sbjct: 571 CECVESGVVSKSFCQNKCQFSSIL 594
Score = 31.1 bits (67), Expect = 0.54
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 237 CINNTGCNSQSASPVCDTDGLTHANPCH 320
C + C + PVC DG + +PCH
Sbjct: 524 CNSQCSCENAHLYPVCSADGTAYFSPCH 551
>U39993-2|AAK72059.1| 744|Caenorhabditis elegans Hypothetical
protein F47E1.2 protein.
Length = 744
Score = 30.7 bits (66), Expect = 0.71
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 237 CINNTGCNSQSASPVCDTDGLTHANPCH 320
C + C + PVCD G + +PCH
Sbjct: 532 CNSQCSCENARLYPVCDQTGFAYFSPCH 559
>Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical
protein ZK1067.7 protein.
Length = 373
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +3
Query: 192 NVCLSRLQTSCPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRKLAYWGECLSG 371
N C ++ Q++CP C+ CNSQ S ++ N +++ ++ +C S
Sbjct: 256 NSCSNQCQSACPTPICVQQ--CNSQCQSQCSNSCSGNSCNQQQVIVLQQQDNCQNQCQSS 313
Query: 372 CSAT 383
C T
Sbjct: 314 CMNT 317
>U40953-6|AAB52651.1| 809|Caenorhabditis elegans Hypothetical
protein F53B1.8 protein.
Length = 809
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +3
Query: 267 SASPVCDTDGLTHANPCHLMMNGRKLAYWGECLSGCSAT 383
S + C D + C + +GR+ Y+ C +GCS T
Sbjct: 599 SCNKQCTCDPSEYRPVCAELDDGRQFTYYSPCYAGCSET 637
>AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical
protein Y32F6B.1 protein.
Length = 758
Score = 29.5 bits (63), Expect = 1.6
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 237 CINNTGCNSQSASPVCDTDGLTHANPCH 320
C ++ C PVCD G + +PCH
Sbjct: 512 CRDDCMCEQTPLYPVCDVSGSAYYSPCH 539
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 28.7 bits (61), Expect = 2.9
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Frame = +3
Query: 228 QHACINNTGCNSQSASPVCDTDGLTHANPC----------HLMMNGRKLAYWGECLSG-C 374
Q C C ++ +PVCD G THAN C + + ++ Y G C C
Sbjct: 116 QEKCSCTAPCPTEW-NPVCDKKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVCCEDMC 174
Query: 375 SA---TGTVCGVNGVTYISECA 431
SA + TVC G T+ C+
Sbjct: 175 SAGQTSLTVCDSEGNTHTDICS 196
>AF016439-2|AAB65897.1| 176|Caenorhabditis elegans Hypothetical
protein R02F11.1 protein.
Length = 176
Score = 28.7 bits (61), Expect = 2.9
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 243 NNTG-CNSQSASPVCDTDGLTHANP-CHLMMNGRKLAYWGECLSGCSATGTVCGVNGVTY 416
N+TG C +Q VC T + + N C + +G L G C++G TG CG + Y
Sbjct: 119 NSTGPCVNQ----VCPTGFMCNTNNYCCPLGSGGVL---GSCVNGVCPTGYTCGAGNLCY 171
Query: 417 IS 422
+S
Sbjct: 172 LS 173
>U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical
protein K02G10.5 protein.
Length = 655
Score = 27.9 bits (59), Expect = 5.0
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Frame = +3
Query: 192 NVCLSRLQTSCPQHACINNTGCNSQSASPVCDTDG-LTHANPCH---LMMNGRKL--AYW 353
NV S L C N C+S +PVC D LT +PCH M G K + W
Sbjct: 430 NVPSSDLPRYGALETCSENCHCDS-FFNPVCSEDSKLTFLSPCHAGCADMPGIKFGASNW 488
Query: 354 GECLSGCS 377
C GCS
Sbjct: 489 TNC--GCS 494
>U00065-2|AAL27237.1| 672|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 25
protein.
Length = 672
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 222 CPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMMN-GRKLAYWGECLSGCSATGTVC 395
C +A N C S S C T+ + +N C+ ++ G + +CLS ++C
Sbjct: 364 CLNNAVCTNNICVSTFCSVSCSTNQVCISNQCYNYVSIGSQCVGSQQCLSNSQCISSIC 422
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 198 CLSRLQTSCPQHACINNTGCNSQSASPVCDTDGLTHANPC 317
C+S ++ +++CI C Q C+ D L +NPC
Sbjct: 136 CVSSNSSATTEYSCI----CTDQQFGTHCEYDNLCASNPC 171
>U46675-3|AAB52643.1| 375|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 10 protein.
Length = 375
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +3
Query: 198 CLSRLQTSCPQHACINNTGCNSQSASPVCDTDGLTHANPC 317
C + Q++C N C Q A P CD + NPC
Sbjct: 241 CQQQAQSTCDCAPVQQNPCC--QQAQPACDCAPVVQQNPC 278
>U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical
protein F55G1.13 protein.
Length = 616
Score = 27.1 bits (57), Expect = 8.7
Identities = 23/88 (26%), Positives = 31/88 (35%), Gaps = 2/88 (2%)
Frame = +3
Query: 216 TSCPQHAC-INNTGCNSQSASPVCDTDGLTHANPCHLMMNGRKLAYWGECLSGCSATGTV 392
TSC + C ++N CN + P C C ++ + C V
Sbjct: 61 TSCSPNPCTLSNQQCNMVNDIPTCTCAVGYTGTDCTMLTSD-------PCSPQPCLQNGV 113
Query: 393 CGVNGVTYISECAAWAEHVSVDYSG-PC 473
C +G TY CA YSG PC
Sbjct: 114 CSSSGGTYSCACATGFFGEQCQYSGDPC 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,174,662
Number of Sequences: 27780
Number of extensions: 242842
Number of successful extensions: 783
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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