Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_I16
         (613 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14970-1|AAA85658.1|  204|Homo sapiens ribosomal protein S5 prot...   236   5e-62
BC018151-1|AAH18151.1|  204|Homo sapiens ribosomal protein S5 pr...   236   5e-62
BC015405-1|AAH15405.1|  204|Homo sapiens ribosomal protein S5 pr...   236   5e-62
AB061853-1|BAB79493.1|  204|Homo sapiens ribosomal protein S5 pr...   236   5e-62
AK223106-1|BAD96826.1|  204|Homo sapiens ribosomal protein S5 va...   232   6e-61
AB007149-1|BAA25815.1|   55|Homo sapiens ribosomal protein S5 pr...   113   5e-25
AB209803-1|BAD93040.1|  107|Homo sapiens ribosomal protein S5 va...    46   1e-04

>U14970-1|AAA85658.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  236 bits (577), Expect = 5e-62
 Identities = 116/119 (97%), Positives = 117/119 (98%)
 Frame = +1

Query: 10  KLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLR 189
           KLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLR
Sbjct: 86  KLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLR 145

Query: 190 RVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 366
           RVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 146 RVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204


>BC018151-1|AAH18151.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  236 bits (577), Expect = 5e-62
 Identities = 116/119 (97%), Positives = 117/119 (98%)
 Frame = +1

Query: 10  KLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLR 189
           KLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLR
Sbjct: 86  KLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLR 145

Query: 190 RVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 366
           RVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 146 RVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204


>BC015405-1|AAH15405.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  236 bits (577), Expect = 5e-62
 Identities = 116/119 (97%), Positives = 117/119 (98%)
 Frame = +1

Query: 10  KLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLR 189
           KLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLR
Sbjct: 86  KLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLR 145

Query: 190 RVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 366
           RVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 146 RVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204


>AB061853-1|BAB79493.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  236 bits (577), Expect = 5e-62
 Identities = 116/119 (97%), Positives = 117/119 (98%)
 Frame = +1

Query: 10  KLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLR 189
           KLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLR
Sbjct: 86  KLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLR 145

Query: 190 RVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 366
           RVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 146 RVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204


>AK223106-1|BAD96826.1|  204|Homo sapiens ribosomal protein S5
           variant protein.
          Length = 204

 Score =  232 bits (568), Expect = 6e-61
 Identities = 114/119 (95%), Positives = 116/119 (97%)
 Frame = +1

Query: 10  KLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLR 189
           KLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLR
Sbjct: 86  KLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLR 145

Query: 190 RVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 366
           RVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSN YAIKK+DELERVAKSNR
Sbjct: 146 RVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNFYAIKKRDELERVAKSNR 204


>AB007149-1|BAA25815.1|   55|Homo sapiens ribosomal protein S5
           protein.
          Length = 55

 Score =  113 bits (272), Expect = 5e-25
 Identities = 54/55 (98%), Positives = 55/55 (100%)
 Frame = +1

Query: 202 AIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 366
           AIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 1   AIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 55


>AB209803-1|BAD93040.1|  107|Homo sapiens ribosomal protein S5
           variant protein.
          Length = 107

 Score = 45.6 bits (103), Expect = 1e-04
 Identities = 24/30 (80%), Positives = 24/30 (80%)
 Frame = +1

Query: 10  KLMAVRIVKHAFEIIHLLTGENPLQVLVTA 99
           KLM VRIVKHAFEIIHLLTGE  L  LV A
Sbjct: 23  KLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,948,506
Number of Sequences: 237096
Number of extensions: 1319780
Number of successful extensions: 2331
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2331
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)