Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_I11
(568 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U49120-1|AAB94634.1| 359|Drosophila melanogaster Y-box protein ... 54 1e-07
AY061440-1|AAL28988.1| 352|Drosophila melanogaster LD37574p pro... 54 1e-07
AE014296-2093|AAF49961.3| 352|Drosophila melanogaster CG5654-PA... 54 1e-07
AJ224676-1|CAA12058.1| 687|Drosophila melanogaster rho type GEF... 35 0.067
AY071298-1|AAL48920.1| 687|Drosophila melanogaster RE32772p pro... 33 0.27
AE014134-3232|AAF53887.2| 687|Drosophila melanogaster CG10043-P... 33 0.27
AE014134-3231|AAF53886.1| 687|Drosophila melanogaster CG10043-P... 33 0.27
AY113377-1|AAM29382.1| 431|Drosophila melanogaster RE01730p pro... 30 2.5
AE013599-3358|AAM68213.1| 431|Drosophila melanogaster CG3074-PB... 30 2.5
AE013599-3357|AAF46818.2| 431|Drosophila melanogaster CG3074-PA... 30 2.5
AE014297-4066|AAF56664.3| 979|Drosophila melanogaster CG6124-PA... 29 4.4
AY060922-1|AAL28470.1| 430|Drosophila melanogaster GM06507p pro... 29 5.8
AY071128-1|AAL48750.1| 408|Drosophila melanogaster RE17417p pro... 28 7.7
AE014296-3182|AAF49135.1| 408|Drosophila melanogaster CG9372-PA... 28 7.7
AE013599-2963|AAF57510.1| 407|Drosophila melanogaster CG16898-P... 28 7.7
>U49120-1|AAB94634.1| 359|Drosophila melanogaster Y-box protein
protein.
Length = 359
Score = 54.4 bits (125), Expect = 1e-07
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = +2
Query: 5 EVAVVAGEKGYEAARVTGPGGESVKGSPYAADKRRSY 115
E VV GEKG EAA VTGP GE V+GS +AADKRR++
Sbjct: 113 EFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRNF 149
>AY061440-1|AAL28988.1| 352|Drosophila melanogaster LD37574p
protein.
Length = 352
Score = 54.4 bits (125), Expect = 1e-07
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = +2
Query: 5 EVAVVAGEKGYEAARVTGPGGESVKGSPYAADKRRSY 115
E VV GEKG EAA VTGP GE V+GS +AADKRR++
Sbjct: 113 EFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRNF 149
>AE014296-2093|AAF49961.3| 352|Drosophila melanogaster CG5654-PA
protein.
Length = 352
Score = 54.4 bits (125), Expect = 1e-07
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = +2
Query: 5 EVAVVAGEKGYEAARVTGPGGESVKGSPYAADKRRSY 115
E VV GEKG EAA VTGP GE V+GS +AADKRR++
Sbjct: 113 EFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRNF 149
>AJ224676-1|CAA12058.1| 687|Drosophila melanogaster rho type GEF
protein.
Length = 687
Score = 35.1 bits (77), Expect = 0.067
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 346 PSSASTQLPAGPGRRPTEPSEWPGGRSTRGASRYNIKPTTAAKAEEKQASN 498
P S+ LPAG GR P PS P G S+ G+ + P T + + K++ +
Sbjct: 403 PPSSHILLPAG-GRPPATPSSIPAGSSSGGSHSHQGSPATNSMSHHKRSQS 452
>AY071298-1|AAL48920.1| 687|Drosophila melanogaster RE32772p
protein.
Length = 687
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 346 PSSASTQLPAGPGRRPTEPSEWPGGRSTRGASRYNIKPTTAAKAEEKQASN 498
P S+ LP G GR P PS P G S+ G+ + P T + + K++ +
Sbjct: 403 PPSSHILLPPG-GRPPATPSSIPAGSSSGGSHSHQGSPATNSMSHHKRSQS 452
>AE014134-3232|AAF53887.2| 687|Drosophila melanogaster CG10043-PB,
isoform B protein.
Length = 687
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 346 PSSASTQLPAGPGRRPTEPSEWPGGRSTRGASRYNIKPTTAAKAEEKQASN 498
P S+ LP G GR P PS P G S+ G+ + P T + + K++ +
Sbjct: 403 PPSSHILLPPG-GRPPATPSSIPAGSSSGGSHSHQGSPATNSMSHHKRSQS 452
>AE014134-3231|AAF53886.1| 687|Drosophila melanogaster CG10043-PA,
isoform A protein.
Length = 687
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 346 PSSASTQLPAGPGRRPTEPSEWPGGRSTRGASRYNIKPTTAAKAEEKQASN 498
P S+ LP G GR P PS P G S+ G+ + P T + + K++ +
Sbjct: 403 PPSSHILLPPG-GRPPATPSSIPAGSSSGGSHSHQGSPATNSMSHHKRSQS 452
>AY113377-1|AAM29382.1| 431|Drosophila melanogaster RE01730p
protein.
Length = 431
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 103 TPQLPSSILPTSRWGTWW*RSPTQRWCRAPW 195
T LPSS +W ++ P Q WC A W
Sbjct: 184 TDGLPSSFNALDKWSSYISEVPDQGWCGASW 214
>AE013599-3358|AAM68213.1| 431|Drosophila melanogaster CG3074-PB,
isoform B protein.
Length = 431
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 103 TPQLPSSILPTSRWGTWW*RSPTQRWCRAPW 195
T LPSS +W ++ P Q WC A W
Sbjct: 184 TDGLPSSFNALDKWSSYISEVPDQGWCGASW 214
>AE013599-3357|AAF46818.2| 431|Drosophila melanogaster CG3074-PA,
isoform A protein.
Length = 431
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 103 TPQLPSSILPTSRWGTWW*RSPTQRWCRAPW 195
T LPSS +W ++ P Q WC A W
Sbjct: 184 TDGLPSSFNALDKWSSYISEVPDQGWCGASW 214
>AE014297-4066|AAF56664.3| 979|Drosophila melanogaster CG6124-PA
protein.
Length = 979
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -1
Query: 238 LTLIPLCTP-LIGWRSTAPDTTSAWGSFTTTSPTLTWVVLTMVAAAFVSCI 89
L +P+C P + P + W + L WV +T+V+ AF+ I
Sbjct: 891 LICLPICEPECLNGLCEFPGSCVCWDGHEKSERHLKWVFITIVSMAFILAI 941
>AY060922-1|AAL28470.1| 430|Drosophila melanogaster GM06507p
protein.
Length = 430
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 103 TPQLPSSILPTSRWGTWW*RSPTQRWCRAPW 195
T LP+S +W ++ P Q WC A W
Sbjct: 184 TDGLPNSFNALDKWSSYISEVPDQGWCGASW 214
>AY071128-1|AAL48750.1| 408|Drosophila melanogaster RE17417p
protein.
Length = 408
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 358 STQLPAGPGRRPTEPSEWP 414
S Q P G RP EP EWP
Sbjct: 168 SRQFPRLTGGRPAEPDEWP 186
>AE014296-3182|AAF49135.1| 408|Drosophila melanogaster CG9372-PA
protein.
Length = 408
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 358 STQLPAGPGRRPTEPSEWP 414
S Q P G RP EP EWP
Sbjct: 168 SRQFPRLTGGRPAEPDEWP 186
>AE013599-2963|AAF57510.1| 407|Drosophila melanogaster CG16898-PA
protein.
Length = 407
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +3
Query: 66 VNPSRVHLMQLTNAAATIVNTTHVKVGDVVVKEPHAEVVSGAVDLHPIKGVHKG 227
VN RV + L + T+ +VVK+ H E+++ ++ +H +KG
Sbjct: 138 VNADRVKQLDLAHTKLTLEVLAKFHAASIVVKQRHPELLTKSLFIHCFSRDNKG 191
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,180,724
Number of Sequences: 53049
Number of extensions: 359415
Number of successful extensions: 1580
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1579
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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