Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_I08
(429 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 151 3e-37
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 151 3e-37
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 50 9e-07
AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical... 31 0.27
Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical pr... 31 0.46
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 29 1.1
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 29 1.1
AF014940-10|AAK73900.1| 243|Caenorhabditis elegans Hypothetical... 29 1.1
Z81593-6|CAB04740.2| 367|Caenorhabditis elegans Hypothetical pr... 28 2.5
AC006769-1|AAF60590.2| 287|Caenorhabditis elegans Hypothetical ... 28 2.5
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 28 3.3
U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical pr... 28 3.3
AC093703-2|AAL77187.3| 473|Caenorhabditis elegans Hypothetical ... 28 3.3
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 27 4.3
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 27 4.3
U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical pr... 27 4.3
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 27 4.3
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 27 4.3
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 27 4.3
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 27 4.3
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 27 5.7
U41559-5|AAC24258.1| 217|Caenorhabditis elegans Hypothetical pr... 27 5.7
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 26 10.0
M98552-5|AAA28207.1| 401|Caenorhabditis elegans Hypothetical pr... 26 10.0
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 26 10.0
AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical ... 26 10.0
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 151 bits (365), Expect = 3e-37
Identities = 72/139 (51%), Positives = 80/139 (57%)
Frame = +1
Query: 10 RSVHVIFSYKGKNHLIKKDIRCNDDVYTHLYTLIVKPDNTYEVLIDNEKVESGELEADWD 189
R VHVI +YKG+N LIKK+I C D THLYTLI+ DNTYEV ID E ++G LE DWD
Sbjct: 137 RRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGSLEEDWD 196
Query: 190 FLPPKKIKDPEAKKPEDWXXXXXXXXXXXXXXXXXXXXXHIPDPDASKXXXXXXXXXXXX 369
LP KKIKDP+AKKPEDW HIPDPDA K
Sbjct: 197 LLPAKKIKDPDAKKPEDWDEREYIDDAEDAKPEDWEKPEHIPDPDAKKPEDWDDEMDGEW 256
Query: 370 XXXXIDNPDYNGVWAPKQI 426
IDNP+Y G W PKQI
Sbjct: 257 EPPMIDNPEYKGEWKPKQI 275
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 151 bits (365), Expect = 3e-37
Identities = 72/139 (51%), Positives = 80/139 (57%)
Frame = +1
Query: 10 RSVHVIFSYKGKNHLIKKDIRCNDDVYTHLYTLIVKPDNTYEVLIDNEKVESGELEADWD 189
R VHVI +YKG+N LIKK+I C D THLYTLI+ DNTYEV ID E ++G LE DWD
Sbjct: 137 RRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGSLEEDWD 196
Query: 190 FLPPKKIKDPEAKKPEDWXXXXXXXXXXXXXXXXXXXXXHIPDPDASKXXXXXXXXXXXX 369
LP KKIKDP+AKKPEDW HIPDPDA K
Sbjct: 197 LLPAKKIKDPDAKKPEDWDEREYIDDAEDAKPEDWEKPEHIPDPDAKKPEDWDDEMDGEW 256
Query: 370 XXXXIDNPDYNGVWAPKQI 426
IDNP+Y G W PKQI
Sbjct: 257 EPPMIDNPEYKGEWKPKQI 275
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 49.6 bits (113), Expect = 9e-07
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
Frame = +1
Query: 16 VHVIFSYKGKNHLIKKDIRCN----------DDVYTHLYTLIVKPDNTYEVLIDNEKVES 165
VH+IF YK + + N DD THL+TL+VKP Y V +D + +
Sbjct: 192 VHLIFRYKNPINGTISEYHANQPTTIGSTYWDDHNTHLFTLVVKPTGEYSVSVDGKSLYY 251
Query: 166 GELEADWD--FLPPKKIKDPEAKKPEDW 243
G + +D PPK+I D KP DW
Sbjct: 252 GNMMSDVTPALTPPKQIFDETDLKPVDW 279
Score = 35.1 bits (77), Expect = 0.022
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +1
Query: 112 VKPDNTYEVLIDNEKVESGELEADWDFLPPKKIKDPEAKKPEDW 243
VKPD+ E + E+ DW+ + I DPEAKKP+DW
Sbjct: 291 VKPDDWDENEPQSVVDEAATKPYDWNEEENELIADPEAKKPQDW 334
Score = 29.9 bits (64), Expect = 0.81
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 145 DNEKVESGELEADWDFLPPKKIKDPEAKKPEDW 243
+N + ES DWD P+ + D A KP DW
Sbjct: 283 ENIEDESAVKPDDWDENEPQSVVDEAATKPYDW 315
>AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical
protein Y105E8B.7 protein.
Length = 269
Score = 31.5 bits (68), Expect = 0.27
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 76 NDDVYTHLYTLIVKPDN-TYEVLIDNEKVESGELEADWDFLPP 201
N++ +TH +TL VKP N Y+ DN+ ++ + E F P
Sbjct: 19 NENGHTHKWTLFVKPGNRDYDEFPDNKLIQKVKFEIHESFAQP 61
>Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical
protein M01B2.6 protein.
Length = 450
Score = 30.7 bits (66), Expect = 0.46
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = +2
Query: 152 RRLNLVN*KPTGTSYLRRRSRIQKQRNLKIGTTNPQSPTRKTRNPRTGTNLSTFRTLMPV 331
R + L++ K G Y+ RRS +QK NL + S T N T L TF +
Sbjct: 339 RNVTLIDGKAVGEVYMPRRSALQKGYNLSSYNYDDLSETAFIYNSTTKEYL-TFEVKRSI 397
Query: 332 SLKIGMMRWMESG 370
+ K+ ++ M G
Sbjct: 398 AAKLDYVQNMNLG 410
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
K07E12.1a protein.
Length = 13100
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 43 KNHLIKKDIRCNDDVYTHLYTLIVKPDNTYEV-LIDNEKVES 165
K I+K++ C D THL L D+TY V ++ NE+V++
Sbjct: 12856 KEKWIRKEVTCRDSFGTHLNEL--PSDHTYTVCVMTNERVDN 12895
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
Length = 13100
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 43 KNHLIKKDIRCNDDVYTHLYTLIVKPDNTYEV-LIDNEKVES 165
K I+K++ C D THL L D+TY V ++ NE+V++
Sbjct: 12856 KEKWIRKEVTCRDSFGTHLNEL--PSDHTYTVCVMTNERVDN 12895
>AF014940-10|AAK73900.1| 243|Caenorhabditis elegans Hypothetical
protein W02D7.10 protein.
Length = 243
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 355 SHHPNLQAYWHQGPECAQVCPSPRVSCLPGRGLWVCRP 242
+ +PN YW G Q+ P P V G+ L+ P
Sbjct: 168 TQYPNQTYYWSDGSASEQMVPQPEVIAPGGKALYTFDP 205
>Z81593-6|CAB04740.2| 367|Caenorhabditis elegans Hypothetical
protein T20B3.12 protein.
Length = 367
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +2
Query: 275 TRNPRTGTNLSTFRTL----MPVSLKIGMMRWMESGNHL*STTPTT 400
TR P T +ST TL +P++ K W S + ST+PT+
Sbjct: 58 TRQPICETAVSTISTLATSTLPITTKSSTTHWSTSSTPISSTSPTS 103
>AC006769-1|AAF60590.2| 287|Caenorhabditis elegans Hypothetical
protein Y45G12C.8 protein.
Length = 287
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/40 (25%), Positives = 24/40 (60%)
Frame = -1
Query: 120 RFHDESVQVRVNVVIAADVLLDQMVLPFVAEDHVNTSSSC 1
R+ ++ ++ + +++ D LLDQ+V+ ++ +NT C
Sbjct: 118 RYQEKIIKFEIILILIPDGLLDQLVMIGFCKNSINTPLEC 157
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = -3
Query: 361 HPSHHPNLQAYWH--QGPECAQV-CPSPRV 281
HP HHP+LQ ++H Q A CPS V
Sbjct: 1620 HPPHHPHLQNHYHPPQNHTSATAPCPSAMV 1649
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = -3
Query: 361 HPSHHPNLQAYWH--QGPECAQV-CPSPRV 281
HP HHP+LQ ++H Q A CPS V
Sbjct: 1781 HPPHHPHLQNHYHPPQNHTSATAPCPSAMV 1810
>U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical
protein C25G6.3 protein.
Length = 532
Score = 27.9 bits (59), Expect = 3.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 43 KNHLIKKDIRCNDDVYTHLYTLIVKPDN 126
KNHLI + C+ D ++LYT++ K ++
Sbjct: 300 KNHLITDGLHCH-DALSYLYTILTKGES 326
>AC093703-2|AAL77187.3| 473|Caenorhabditis elegans Hypothetical
protein Y20F4.2 protein.
Length = 473
Score = 27.9 bits (59), Expect = 3.3
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = -3
Query: 376 VVPTLHPSHHPNLQAYWHQGPECAQ-VCPSPRVSCLPGRGLWVCRPNLQVSLLLDP*SSS 200
+VP +HP HH Q +HQ P Q P P P + Q S L P S
Sbjct: 189 MVP-MHPHHHQQQQMAFHQMPHYLQNSMPGPSGMMAPN------SQSQQHSPQLTP-QGS 240
Query: 199 EVGSPSRLLIHQIQP 155
+ GSP + + HQI P
Sbjct: 241 QQGSPVQ-MHHQIPP 254
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -3
Query: 346 PNLQAYWHQGPECAQVCPSPRVSCLPGRGLWVCRPN 239
PN +G + CP+P C P G VC PN
Sbjct: 1121 PNFYGLTSEGCTECEPCPAPGQVCDPIDGSCVCPPN 1156
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 27.5 bits (58), Expect = 4.3
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 245 TTNPQSPTRKTRNPRTGTNLSTFRTLMP-VSLKIGMMRWMESGNHL*STTPTT 400
TT P +PT T P T T T T P + + E+ +TTPTT
Sbjct: 75 TTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTT 127
>U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical
protein T12E12.2 protein.
Length = 891
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 143 STMRRLNLVN*KPTGTSYLRRRSRIQKQRNLKIGTTNPQSPTRKTRNP 286
ST RR++L + K YL+ I+++R K Q+ + +NP
Sbjct: 100 STWRRISLASEKCVTNRYLKTDDEIEEKRARKKAKLEEQNRKEQAKNP 147
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical protein
B0496.3a protein.
Length = 1551
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +2
Query: 182 TGTSYLRRRSRIQKQRNLKIGT 247
+ ++Y+RR++R ++QRN IGT
Sbjct: 1038 SASAYIRRKNRERRQRNRTIGT 1059
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical protein
B0496.3b protein.
Length = 1592
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +2
Query: 182 TGTSYLRRRSRIQKQRNLKIGT 247
+ ++Y+RR++R ++QRN IGT
Sbjct: 1079 SASAYIRRKNRERRQRNRTIGT 1100
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -3
Query: 346 PNLQAYWHQGPECAQVCPSPRVSCLPGRGLWVCRPN 239
PN +G + CP+P C P G VC PN
Sbjct: 1121 PNFYGLTSEGCTECEPCPAPGQVCDPIDGSCVCPPN 1156
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -3
Query: 346 PNLQAYWHQGPECAQVCPSPRVSCLPGRGLWVCRPN 239
PN +G + CP+P C P G VC PN
Sbjct: 1121 PNFYGLTSEGCTECEPCPAPGQVCDPIDGSCVCPPN 1156
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 200 RRRSRIQKQRNLKIGTTNPQSPTRKTRNPRTGT 298
R R R +K NLK T P++P +++R+ R+G+
Sbjct: 111 RARGRPRKATNLKSQLTTPRTPEKQSRS-RSGS 142
>U41559-5|AAC24258.1| 217|Caenorhabditis elegans Hypothetical
protein C26B2.2 protein.
Length = 217
Score = 27.1 bits (57), Expect = 5.7
Identities = 25/78 (32%), Positives = 36/78 (46%)
Frame = +2
Query: 56 SRRTSAAMTTFTRTCTLSS*NRITLTRSSSTMRRLNLVN*KPTGTSYLRRRSRIQKQRNL 235
SRR S T + T++S + SSST++ L+L + T++ +S I
Sbjct: 55 SRRNSELNLTENKPITIASCGFVPQMMSSSTVKNLSL---SSSATNFNSEKSEI----GS 107
Query: 236 KIGTTNPQSPTRKTRNPR 289
KI T NP K RN R
Sbjct: 108 KI-TMNPAKQVLKGRNTR 124
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 216 SRSKET*RLGRQTHNPRPGRQETRGLGQT*AHS 314
SRS+ RL R++ +PR R+E R + ++ + S
Sbjct: 224 SRSRSAERLRRKSRSPRRSREEPRKMSRSRSRS 256
>M98552-5|AAA28207.1| 401|Caenorhabditis elegans Hypothetical
protein ZK370.5 protein.
Length = 401
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +1
Query: 124 NTYEVLIDNEKVESGELEADWDFLPPKKIKDPEAKKPEDW 243
N+Y L + V + ++ LPPK ++ P +K +W
Sbjct: 46 NSYTFLKNELLVRLANIMQEFTLLPPKLLQMPSSKMVSNW 85
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 216 SRSKET*RLGRQTHNPRPGRQETRGLGQT*AHS 314
SRS+ RL R++ +PR R+E R + ++ + S
Sbjct: 224 SRSRSAERLRRKSRSPRRSREEPRKMSRSRSRS 256
>AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical
protein Y39A1C.2 protein.
Length = 1066
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 381 HRWFPLSIHLIIPIFRLTGIRVRNVL 304
H W P+ H ++PI + T +RNVL
Sbjct: 350 HYWHPVFGHYLLPIDKRTEGALRNVL 375
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.138 0.436
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,626,814
Number of Sequences: 27780
Number of extensions: 204954
Number of successful extensions: 487
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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