Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_I05
(507 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13 pro... 182 8e-46
L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13 pro... 182 8e-46
D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13 pro... 182 8e-46
BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13 p... 182 8e-46
BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13 p... 182 8e-46
BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13 p... 182 8e-46
BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13 p... 182 8e-46
BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13 p... 182 8e-46
L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13 pro... 155 1e-37
AL596244-1|CAI39809.1| 451|Homo sapiens tubulin tyrosine ligase... 32 1.0
AL445587-1|CAI40705.1| 451|Homo sapiens tubulin tyrosine ligase... 32 1.0
AL442634-1|CAI39983.1| 451|Homo sapiens tubulin tyrosine ligase... 32 1.0
AE006466-6|AAK61271.1| 275|Homo sapiens tryptase I protein. 29 7.1
>X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 182 bits (442), Expect = 8e-46
Identities = 84/94 (89%), Positives = 91/94 (96%)
Frame = +3
Query: 48 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 227
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 228 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKK 329
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKK
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKK 94
Score = 113 bits (271), Expect = 4e-25
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = +1
Query: 325 RSAVAMRKHLERNRKDKDSKFRLILVESMIHRLARYYKTKSVLPPNWKYESSTASALVA 501
+ AVA+RKHLERNRKDKD+KFRLIL+ES IHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 93 KKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 182 bits (442), Expect = 8e-46
Identities = 84/94 (89%), Positives = 91/94 (96%)
Frame = +3
Query: 48 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 227
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 228 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKK 329
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKK
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKK 94
Score = 113 bits (271), Expect = 4e-25
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = +1
Query: 325 RSAVAMRKHLERNRKDKDSKFRLILVESMIHRLARYYKTKSVLPPNWKYESSTASALVA 501
+ AVA+RKHLERNRKDKD+KFRLIL+ES IHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 93 KKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 182 bits (442), Expect = 8e-46
Identities = 84/94 (89%), Positives = 91/94 (96%)
Frame = +3
Query: 48 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 227
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 228 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKK 329
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKK
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKK 94
Score = 113 bits (271), Expect = 4e-25
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = +1
Query: 325 RSAVAMRKHLERNRKDKDSKFRLILVESMIHRLARYYKTKSVLPPNWKYESSTASALVA 501
+ AVA+RKHLERNRKDKD+KFRLIL+ES IHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 93 KKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 182 bits (442), Expect = 8e-46
Identities = 84/94 (89%), Positives = 91/94 (96%)
Frame = +3
Query: 48 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 227
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 228 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKK 329
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKK
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKK 94
Score = 113 bits (271), Expect = 4e-25
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = +1
Query: 325 RSAVAMRKHLERNRKDKDSKFRLILVESMIHRLARYYKTKSVLPPNWKYESSTASALVA 501
+ AVA+RKHLERNRKDKD+KFRLIL+ES IHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 93 KKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 182 bits (442), Expect = 8e-46
Identities = 84/94 (89%), Positives = 91/94 (96%)
Frame = +3
Query: 48 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 227
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 228 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKK 329
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKK
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKK 94
Score = 113 bits (271), Expect = 4e-25
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = +1
Query: 325 RSAVAMRKHLERNRKDKDSKFRLILVESMIHRLARYYKTKSVLPPNWKYESSTASALVA 501
+ AVA+RKHLERNRKDKD+KFRLIL+ES IHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 93 KKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 182 bits (442), Expect = 8e-46
Identities = 84/94 (89%), Positives = 91/94 (96%)
Frame = +3
Query: 48 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 227
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 228 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKK 329
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKK
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKK 94
Score = 113 bits (271), Expect = 4e-25
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = +1
Query: 325 RSAVAMRKHLERNRKDKDSKFRLILVESMIHRLARYYKTKSVLPPNWKYESSTASALVA 501
+ AVA+RKHLERNRKDKD+KFRLIL+ES IHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 93 KKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 182 bits (442), Expect = 8e-46
Identities = 84/94 (89%), Positives = 91/94 (96%)
Frame = +3
Query: 48 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 227
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 228 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKK 329
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKK
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKK 94
Score = 113 bits (271), Expect = 4e-25
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = +1
Query: 325 RSAVAMRKHLERNRKDKDSKFRLILVESMIHRLARYYKTKSVLPPNWKYESSTASALVA 501
+ AVA+RKHLERNRKDKD+KFRLIL+ES IHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 93 KKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 182 bits (442), Expect = 8e-46
Identities = 84/94 (89%), Positives = 91/94 (96%)
Frame = +3
Query: 48 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 227
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 228 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKK 329
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKK
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKK 94
Score = 113 bits (271), Expect = 4e-25
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = +1
Query: 325 RSAVAMRKHLERNRKDKDSKFRLILVESMIHRLARYYKTKSVLPPNWKYESSTASALVA 501
+ AVA+RKHLERNRKDKD+KFRLIL+ES IHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 93 KKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13
protein.
Length = 116
Score = 155 bits (375), Expect = 1e-37
Identities = 73/83 (87%), Positives = 79/83 (95%)
Frame = +3
Query: 81 SQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 260
SQSALPYRRSVPTWLKLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGVAQVRFVTG KI
Sbjct: 1 SQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKI 60
Query: 261 LRIMKAMGLAPDLPEDLYYLIKK 329
LRI+K+ GLA DLPEDLY+LIKK
Sbjct: 61 LRILKSKGLASDLPEDLYHLIKK 83
Score = 64.5 bits (150), Expect = 2e-10
Identities = 29/35 (82%), Positives = 33/35 (94%)
Frame = +1
Query: 325 RSAVAMRKHLERNRKDKDSKFRLILVESMIHRLAR 429
+ AVA+RKHLERNRKDKD+KFRLIL+ES IHRLAR
Sbjct: 82 KKAVAVRKHLERNRKDKDAKFRLILIESRIHRLAR 116
>AL596244-1|CAI39809.1| 451|Homo sapiens tubulin tyrosine
ligase-like family, member 11 protein.
Length = 451
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -3
Query: 187 GVRPFLPSLKICS--LTSSAVSFNQVGTLRRYGSADWDIPLPGACIRPILAAFYYIA 23
G R F+ S K+ S L+ +AV + RR+ S D G C++ + AF+++A
Sbjct: 313 GFRTFIRSCKLSSSSLSMAAVDILYIDITRRWNSMTLDQRDSGMCLQAFVEAFFFLA 369
>AL445587-1|CAI40705.1| 451|Homo sapiens tubulin tyrosine
ligase-like family, member 11 protein.
Length = 451
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -3
Query: 187 GVRPFLPSLKICS--LTSSAVSFNQVGTLRRYGSADWDIPLPGACIRPILAAFYYIA 23
G R F+ S K+ S L+ +AV + RR+ S D G C++ + AF+++A
Sbjct: 313 GFRTFIRSCKLSSSSLSMAAVDILYIDITRRWNSMTLDQRDSGMCLQAFVEAFFFLA 369
>AL442634-1|CAI39983.1| 451|Homo sapiens tubulin tyrosine
ligase-like family, member 11 protein.
Length = 451
Score = 32.3 bits (70), Expect = 1.0
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -3
Query: 187 GVRPFLPSLKICS--LTSSAVSFNQVGTLRRYGSADWDIPLPGACIRPILAAFYYIA 23
G R F+ S K+ S L+ +AV + RR+ S D G C++ + AF+++A
Sbjct: 313 GFRTFIRSCKLSSSSLSMAAVDILYIDITRRWNSMTLDQRDSGMCLQAFVEAFFFLA 369
>AE006466-6|AAK61271.1| 275|Homo sapiens tryptase I protein.
Length = 275
Score = 29.5 bits (63), Expect = 7.1
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -1
Query: 120 R*GHCGGTAAPTGIYPCQV--RAYDPYWRLF 34
R G GG AP +P QV R +DPYW F
Sbjct: 28 RVGIVGGQEAPRSKWPWQVSLRVHDPYWMHF 58
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,812,988
Number of Sequences: 237096
Number of extensions: 1674549
Number of successful extensions: 3365
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3365
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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