BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_I03
(337 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071683-1|AAL49305.2| 147|Drosophila melanogaster RH08962p pro... 102 1e-22
AE014297-2878|AAN13838.1| 132|Drosophila melanogaster CG15697-P... 102 1e-22
AE014297-2877|AAF55815.1| 132|Drosophila melanogaster CG15697-P... 102 1e-22
AY069212-1|AAL39357.1| 328|Drosophila melanogaster GH26215p pro... 29 1.1
AE014296-3089|AAF49205.1| 328|Drosophila melanogaster CG6836-PA... 29 1.1
M10017-1|AAA65478.1| 552|Drosophila melanogaster engrailed prot... 27 8.0
BT001415-1|AAN71170.1| 261|Drosophila melanogaster GH11992p pro... 27 8.0
AY069448-1|AAL39593.1| 552|Drosophila melanogaster LD16125p pro... 27 8.0
AE014298-1754|AAG22345.2| 570|Drosophila melanogaster CG1924-PA... 27 8.0
AE013599-3519|AAN16120.1| 268|Drosophila melanogaster CG32833-P... 27 8.0
AE013599-1321|AAM68711.1| 552|Drosophila melanogaster CG9015-PB... 27 8.0
AE013599-1320|AAF58639.1| 552|Drosophila melanogaster CG9015-PA... 27 8.0
>AY071683-1|AAL49305.2| 147|Drosophila melanogaster RH08962p
protein.
Length = 147
Score = 102 bits (245), Expect = 1e-22
Identities = 52/86 (60%), Positives = 57/86 (66%)
Frame = +1
Query: 7 GAPLEDSCLVSELSSTELDLTVPLLGGKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXX 186
G L + V+ LSS ELDL +P+LGGKVHGSLARAGKVKGQTP
Sbjct: 61 GITLANETPVTALSSFELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAK 120
Query: 187 XXIQYNRRFVNVVQTFGRRRGPNSNS 264
IQYNRRFVN VQ FGRRRGPN+NS
Sbjct: 121 RRIQYNRRFVNFVQGFGRRRGPNANS 146
>AE014297-2878|AAN13838.1| 132|Drosophila melanogaster CG15697-PB,
isoform B protein.
Length = 132
Score = 102 bits (245), Expect = 1e-22
Identities = 52/86 (60%), Positives = 57/86 (66%)
Frame = +1
Query: 7 GAPLEDSCLVSELSSTELDLTVPLLGGKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXX 186
G L + V+ LSS ELDL +P+LGGKVHGSLARAGKVKGQTP
Sbjct: 46 GITLANETPVTALSSFELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAK 105
Query: 187 XXIQYNRRFVNVVQTFGRRRGPNSNS 264
IQYNRRFVN VQ FGRRRGPN+NS
Sbjct: 106 RRIQYNRRFVNFVQGFGRRRGPNANS 131
>AE014297-2877|AAF55815.1| 132|Drosophila melanogaster CG15697-PA,
isoform A protein.
Length = 132
Score = 102 bits (245), Expect = 1e-22
Identities = 52/86 (60%), Positives = 57/86 (66%)
Frame = +1
Query: 7 GAPLEDSCLVSELSSTELDLTVPLLGGKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXX 186
G L + V+ LSS ELDL +P+LGGKVHGSLARAGKVKGQTP
Sbjct: 46 GITLANETPVTALSSFELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAK 105
Query: 187 XXIQYNRRFVNVVQTFGRRRGPNSNS 264
IQYNRRFVN VQ FGRRRGPN+NS
Sbjct: 106 RRIQYNRRFVNFVQGFGRRRGPNANS 131
>AY069212-1|AAL39357.1| 328|Drosophila melanogaster GH26215p
protein.
Length = 328
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -3
Query: 212 NLLLYWILRLARPVLFF---FFCCFSTLGVWPLTLPAR 108
N+L Y ++L R V+FF F C LG W L + R
Sbjct: 195 NILYYRDIQLYRQVMFFFIPFIVCSIVLGAWSLQITVR 232
>AE014296-3089|AAF49205.1| 328|Drosophila melanogaster CG6836-PA
protein.
Length = 328
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -3
Query: 212 NLLLYWILRLARPVLFF---FFCCFSTLGVWPLTLPAR 108
N+L Y ++L R V+FF F C LG W L + R
Sbjct: 195 NILYYRDIQLYRQVMFFFIPFIVCSIVLGAWSLQITVR 232
>M10017-1|AAA65478.1| 552|Drosophila melanogaster engrailed protein
protein.
Length = 552
Score = 26.6 bits (56), Expect = 8.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 146 STLGVWPLTLPARARDPCTLPPRRGTVRSSSVDESSDTRHES 21
S LG + A + P +PP R S ++ S DTR E+
Sbjct: 368 SRLGASGSGVNASSPQPQPIPPPSAVSRDSGMESSDDTRSET 409
>BT001415-1|AAN71170.1| 261|Drosophila melanogaster GH11992p
protein.
Length = 261
Score = 26.6 bits (56), Expect = 8.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 282 FTELILRVRVGSTTAAEGLDNV 217
F ++RVRVGSTT ++G+ V
Sbjct: 76 FLNKVIRVRVGSTTRSDGVIEV 97
>AY069448-1|AAL39593.1| 552|Drosophila melanogaster LD16125p
protein.
Length = 552
Score = 26.6 bits (56), Expect = 8.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 146 STLGVWPLTLPARARDPCTLPPRRGTVRSSSVDESSDTRHES 21
S LG + A + P +PP R S ++ S DTR E+
Sbjct: 368 SRLGASGSGVNASSPQPQPIPPPSAVSRDSGMESSDDTRSET 409
>AE014298-1754|AAG22345.2| 570|Drosophila melanogaster CG1924-PA
protein.
Length = 570
Score = 26.6 bits (56), Expect = 8.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 131 WPLTLPARARDPCTLPPRR 75
W LT+P R C LPP++
Sbjct: 525 WKLTIPPRRAYSCPLPPKK 543
>AE013599-3519|AAN16120.1| 268|Drosophila melanogaster CG32833-PA
protein.
Length = 268
Score = 26.6 bits (56), Expect = 8.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 282 FTELILRVRVGSTTAAEGLDNV 217
F ++RVRVGSTT ++G+ V
Sbjct: 83 FLNKVIRVRVGSTTRSDGVIEV 104
>AE013599-1321|AAM68711.1| 552|Drosophila melanogaster CG9015-PB,
isoform B protein.
Length = 552
Score = 26.6 bits (56), Expect = 8.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 146 STLGVWPLTLPARARDPCTLPPRRGTVRSSSVDESSDTRHES 21
S LG + A + P +PP R S ++ S DTR E+
Sbjct: 368 SRLGASGSGVNASSPQPQPIPPPSAVSRDSGMESSDDTRSET 409
>AE013599-1320|AAF58639.1| 552|Drosophila melanogaster CG9015-PA,
isoform A protein.
Length = 552
Score = 26.6 bits (56), Expect = 8.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 146 STLGVWPLTLPARARDPCTLPPRRGTVRSSSVDESSDTRHES 21
S LG + A + P +PP R S ++ S DTR E+
Sbjct: 368 SRLGASGSGVNASSPQPQPIPPPSAVSRDSGMESSDDTRSET 409
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,631,905
Number of Sequences: 53049
Number of extensions: 258410
Number of successful extensions: 803
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 756348948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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