Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_I01
         (370 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2202|AAF55311.2|  286|Drosophila melanogaster CG14881-P...    83   1e-16
AY052036-1|AAK93460.1|  399|Drosophila melanogaster LP03706p pro...    28   3.3  
AE014298-1734|AAF48126.2|  399|Drosophila melanogaster CG1806-PA...    28   3.3  
AY113377-1|AAM29382.1|  431|Drosophila melanogaster RE01730p pro...    27   5.8  
AY060922-1|AAL28470.1|  430|Drosophila melanogaster GM06507p pro...    27   5.8  
AE013599-3358|AAM68213.1|  431|Drosophila melanogaster CG3074-PB...    27   5.8  
AE013599-3357|AAF46818.2|  431|Drosophila melanogaster CG3074-PA...    27   5.8  
AE014296-1986|AAS65029.1| 3135|Drosophila melanogaster CG18331-P...    27   7.7  

>AE014297-2202|AAF55311.2|  286|Drosophila melanogaster CG14881-PA,
           isoform A protein.
          Length = 286

 Score = 83.0 bits (196), Expect = 1e-16
 Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
 Frame = +1

Query: 124 KAGDKIRIQKTLTQNDLDAFSNLTGDHNYLHH-NNGNMRPIVHGALLNGLVAGLIGTHLP 300
           KA  ++++ K  +Q+DL+ F+  TGDHNY+H          VHGALLN +VAG++GT LP
Sbjct: 167 KAVKQVQVVKRFSQSDLEQFAQFTGDHNYIHSLETPTEERRVHGALLNAVVAGIMGTQLP 226

Query: 301 GPGTVLVSQTMKFPNKCXV 357
           GPGTV++ Q  KF   C +
Sbjct: 227 GPGTVVLEQNFKFLKPCRI 245


>AY052036-1|AAK93460.1|  399|Drosophila melanogaster LP03706p
           protein.
          Length = 399

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 174 KVILGESFLNSDLITCFKCGTAECCRVNFADLL 76
           KV+L ES++ + L   F C    C  + FA+L+
Sbjct: 268 KVLLAESYVFTGLALIFCCLALVCAAIEFAELI 300


>AE014298-1734|AAF48126.2|  399|Drosophila melanogaster CG1806-PA
           protein.
          Length = 399

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 174 KVILGESFLNSDLITCFKCGTAECCRVNFADLL 76
           KV+L ES++ + L   F C    C  + FA+L+
Sbjct: 268 KVLLAESYVFTGLALIFCCLALVCAAIEFAELI 300


>AY113377-1|AAM29382.1|  431|Drosophila melanogaster RE01730p
           protein.
          Length = 431

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 94  EFCRSSDNSYCSPQYKETCL 35
           EFC   D+S C P Y+  C+
Sbjct: 63  EFCDRDDSSDCCPDYRSFCI 82


>AY060922-1|AAL28470.1|  430|Drosophila melanogaster GM06507p
           protein.
          Length = 430

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 94  EFCRSSDNSYCSPQYKETCL 35
           EFC   D+S C P Y+  C+
Sbjct: 63  EFCDRDDSSDCCPDYRSFCI 82


>AE013599-3358|AAM68213.1|  431|Drosophila melanogaster CG3074-PB,
           isoform B protein.
          Length = 431

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 94  EFCRSSDNSYCSPQYKETCL 35
           EFC   D+S C P Y+  C+
Sbjct: 63  EFCDRDDSSDCCPDYRSFCI 82


>AE013599-3357|AAF46818.2|  431|Drosophila melanogaster CG3074-PA,
           isoform A protein.
          Length = 431

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 94  EFCRSSDNSYCSPQYKETCL 35
           EFC   D+S C P Y+  C+
Sbjct: 63  EFCDRDDSSDCCPDYRSFCI 82


>AE014296-1986|AAS65029.1| 3135|Drosophila melanogaster CG18331-PA
            protein.
          Length = 3135

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +1

Query: 70   NYQKICKIHSTTFSSTAFKAGDKIRIQKTLTQNDLDAFSNLT 195
            N  K  K  STT ++T+   G    I + + QND+ + + +T
Sbjct: 2551 NSGKSVKTSSTTITTTSSDPGQSSSITQGIPQNDIKSLNQVT 2592


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,656,272
Number of Sequences: 53049
Number of extensions: 317607
Number of successful extensions: 927
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)