Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_H22
         (598 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.3  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   2.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   5.3  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   5.3  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 61   TTLTYCISETEVP 23
            TT+TYC +E +VP
Sbjct: 1202 TTVTYCQTEEDVP 1214


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 61   TTLTYCISETEVP 23
            TT+TYC +E +VP
Sbjct: 1198 TTVTYCQTEEDVP 1210


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +1

Query: 382 MIRERLSDILKSSDIHTCMIGLFTHVGPHRHLSG---KIVVSVPSI 510
           +I  R   IL +  ++T  + + + +GP  HL      +VV +P +
Sbjct: 310 IIFARREVILSAGSVNTPQLLMLSGIGPKEHLRSLGIPVVVDLPGV 355


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 536 LTMEHFLHFMLGTDTTIL 483
           L  +HFL    G+D T+L
Sbjct: 278 LPFQHFLDSFAGSDVTVL 295


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -1

Query: 508 CSALIPQSYLISGDVVQHG*TDQSYRYVCQNFLKYPIIFPVSLIY 374
           C +L P   LI G+   +  T  S+  VCQNF  Y I   +   Y
Sbjct: 171 CISLPP--LLIMGNEHTYSETGPSHCVVCQNFF-YQIYATLGSFY 212


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,415
Number of Sequences: 438
Number of extensions: 3601
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)