Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_H17
(568 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 32 0.067
SPBC16E9.12c |pab2||poly|Schizosaccharomyces pombe|chr 2|||Manual 30 0.21
SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 29 0.36
SPBC13A2.01c |||nuclear cap-binding complex small subunit|Schizo... 29 0.48
SPBC660.15 |||mRNA cleavage factor complex subunit |Schizosaccha... 29 0.63
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 28 0.83
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 28 1.1
SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyc... 27 1.5
SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 27 1.9
SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr 3||... 27 1.9
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 3.4
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 4.4
SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual 26 4.4
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 25 5.9
SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces p... 25 5.9
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 25 5.9
SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|c... 25 5.9
SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier ... 25 5.9
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 25 7.7
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 31.9 bits (69), Expect = 0.067
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T ED++ +FE G++ +++ RD R S AL+ ++G L GR +
Sbjct: 352 TDEDVKAIFEPFGDIEFVHLQRDDQNR-SKGFGYIQYRNPISARNALEKMNGFDLAGRNM 410
Query: 337 RV 342
RV
Sbjct: 411 RV 412
Score = 26.6 bits (56), Expect = 2.5
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +1
Query: 151 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGR 330
R T +L FE+ G V D I RD+ + S + A+ +L G+ L G
Sbjct: 250 RLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAAI-ALSGKRLLGL 308
Query: 331 ELRVQM 348
+ VQ+
Sbjct: 309 PVIVQL 314
>SPBC16E9.12c |pab2||poly|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 30.3 bits (65), Expect = 0.21
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
TPE+L+ F CG V + I D++T AL L+G ML R L
Sbjct: 67 TPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNAL-LLNGSMLHERPL 125
Query: 337 RV 342
+V
Sbjct: 126 KV 127
>SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 674
Score = 29.5 bits (63), Expect = 0.36
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +1
Query: 160 PEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELR 339
P+ L F + G+V +I IP R EEA++SL+G +DGR +
Sbjct: 121 PQHLEPHFSKFGKVREIKIPTKGGGRMCGFAFVWMKDRKAA-EEAMNSLNGTEIDGRPIA 179
Query: 340 VQMA 351
V A
Sbjct: 180 VDWA 183
>SPBC13A2.01c |||nuclear cap-binding complex small
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 182
Score = 29.1 bits (62), Expect = 0.48
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
TT E + +F +CGE+ I + DR+T+ ++L + LD R
Sbjct: 43 TTEEQIYALFSKCGEIRRIIMGVDRFTKTPCGFCFVEYFENQDALDSLKYISRTSLDERI 102
Query: 334 LRVQM 348
+R +
Sbjct: 103 IRADL 107
>SPBC660.15 |||mRNA cleavage factor complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 28.7 bits (61), Expect = 0.63
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS---LDGRMLD 324
TT + LR FE+ GEV D + RD T S E + LDG+++D
Sbjct: 174 TTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSKEHHLDGKIID 233
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 28.3 bits (60), Expect = 0.83
Identities = 15/66 (22%), Positives = 27/66 (40%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T EDL +F R G++ + RD+ T +S E+A + ++D
Sbjct: 255 TQDEDLELIFSRFGKIISCQVIRDKETGDSLQYAFIEFDNKESVEKAYFKMQNVLIDDSR 314
Query: 334 LRVQMA 351
+ V +
Sbjct: 315 IHVDFS 320
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.9 bits (59), Expect = 1.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 559 GSGCDCENGRASSWSRSVSGTATDPGCGCASTNASATSNGTWS 431
GSG D + +SSW+ S +A + T S++S +WS
Sbjct: 917 GSGTD--SATSSSWTAETSSSAITSSVAASVTPTSSSSASSWS 957
>SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 438
Score = 27.5 bits (58), Expect = 1.5
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = +1
Query: 163 EDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRV 342
E L R F CG + + I RD T ++AL + +M +GR LR+
Sbjct: 284 EPLWRYFGDCGSIDYVRIVRDPKTNLGKGFAYIQFKDTMGVDKALLLNEKKMPEGRTLRI 343
Query: 343 QMA 351
A
Sbjct: 344 MRA 346
>SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 27.1 bits (57), Expect = 1.9
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = -1
Query: 568 NENGSGCDCENGRASSWSRSVSGTATDPG---CGCASTNASATSNGT 437
N NG+ +C + +SW+ S + P C A N ++NGT
Sbjct: 342 NPNGTIPECPSRNKTSWAVSANAFPVTPNTTICSNAVKNLKCSANGT 388
>SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 27.1 bits (57), Expect = 1.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 520 WSRSVSGTATDPGCGCASTNASATSNGTWSDD 425
W R+++ +P G A+T S+ +N TW D
Sbjct: 239 WGRALALKLVNPLTGGANTTFSSVTNETWFQD 270
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 26.2 bits (55), Expect = 3.4
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 176 AYLKDAERSVISTYPEIVTHEKVEVLLL*DSLTAEMLKKPWTHLMGGC 319
AY ++S EI+T++K E EM+KK W + GC
Sbjct: 1436 AYSVAVRVQMLSELEEIITYKKAED----KPEVREMIKKTWVRRLKGC 1479
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.8 bits (54), Expect = 4.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 529 ASSWSRSVSGTATDPGCGCASTNASATSNGTWSDDVNETVN 407
+SS + + S TAT + + SATS+ S +N T +
Sbjct: 197 SSSLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTS 237
>SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1339
Score = 25.8 bits (54), Expect = 4.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 268 RILQKQNLYFLVCNDLWVCRYHRPLRIFQIRDGDLQE 158
R+ + NL F CN WV L I+Q + DL++
Sbjct: 441 RLFETYNLIF-PCNQYWVFNLEFLLGIYQCKTFDLED 476
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 25.4 bits (53), Expect = 5.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 101 RRPSVTHFDY*YRSSQNTKNSTSDERTNK 15
R+PS+ H Y + + STSDE T++
Sbjct: 963 RKPSLLHTSKSYSNPDDKNTSTSDEDTSE 991
>SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1033
Score = 25.4 bits (53), Expect = 5.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 137 PFNLFGRLLKISVAYLKDAERSVISTYPEIVTHE 238
PF LF + I Y K++E+ + TY +V +
Sbjct: 93 PFELFCSITNIRYCYYKESEKILGQTYGMLVLQD 126
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 25.4 bits (53), Expect = 5.9
Identities = 13/65 (20%), Positives = 27/65 (41%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T +DL F CG++ I +P D + ++ ++ ++G + GR
Sbjct: 378 TEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCVE-MNGHFIAGRPC 436
Query: 337 RVQMA 351
R+ +
Sbjct: 437 RLDFS 441
>SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 819
Score = 25.4 bits (53), Expect = 5.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -1
Query: 379 CRVMRVCHNAPSVLGAPYRLTSAHQVSPGLLQH 281
CR+++ C L AP+ +SA+ LL H
Sbjct: 549 CRIIQDCTELSISLAAPFTASSAYLAGTVLLYH 581
>SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier for
pyridoxine, pyridoxal, and pyridoxamine
Bsu1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 526
Score = 25.4 bits (53), Expect = 5.9
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -2
Query: 267 ESYKSKTSTFSCVTISGYVDITDLSASFKYATEIFRSRPNKLNGPLLVKPCRQYAAAAF 91
++YK SC +SG+V T L IFR K NG + +P ++ +A F
Sbjct: 336 DTYKMSEMGASCTYLSGFVASTLLFLYQPIQDWIFRRDKAKNNG--VARPEARFTSALF 392
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 25.0 bits (52), Expect = 7.7
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 258 KSKTSTFSCVTISGYVDITD 199
K KT F C+ G+VD D
Sbjct: 205 KGKTFAFQCIDTPGHVDFVD 224
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,783,703
Number of Sequences: 5004
Number of extensions: 33703
Number of successful extensions: 111
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 240047038
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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