Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_H17
(568 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein. 87 5e-17
X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein. 87 5e-17
BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor, argini... 87 5e-17
BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor, argini... 87 5e-17
BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein. 87 5e-17
BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein. 87 5e-17
AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor, argini... 87 5e-17
AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens ... 87 5e-17
M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein. 83 5e-16
BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein. 67 5e-11
AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor p... 67 5e-11
AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor p... 67 5e-11
BC066958-1|AAH66958.1| 179|Homo sapiens SFRS2 protein protein. 65 1e-10
AK093626-1|BAC04206.1| 186|Homo sapiens protein ( Homo sapiens ... 65 1e-10
BC021715-1|AAH21715.1| 261|Homo sapiens serine-arginine repress... 52 1e-06
AF449428-1|AAL57515.1| 261|Homo sapiens SRrp35 protein. 52 1e-06
BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein. 52 1e-06
BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein... 52 1e-06
BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein... 52 1e-06
AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2... 52 1e-06
AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38 p... 52 1e-06
AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR prote... 52 1e-06
AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR prote... 52 1e-06
AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protei... 52 1e-06
AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein... 52 1e-06
AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein... 52 1e-06
AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein... 52 1e-06
AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein... 52 1e-06
AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein... 52 1e-06
AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein... 52 1e-06
AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens ... 52 1e-06
AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein. 52 1e-06
AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein ... 52 1e-06
AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein ... 52 1e-06
AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein ... 52 1e-06
AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein ... 52 1e-06
AL353135-4|CAI16247.1| 262|Homo sapiens RP11-63L7.3 protein. 48 2e-05
L03693-1|AAA60162.1| 34|Homo sapiens splicing factor protein. 45 2e-04
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 44 5e-04
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 44 5e-04
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 44 5e-04
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 44 5e-04
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 44 5e-04
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 44 5e-04
CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein. 38 0.033
BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein. 38 0.033
AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1... 38 0.033
AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1... 38 0.033
AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens ... 38 0.033
AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 b... 38 0.033
AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1 a... 38 0.033
BC071575-1|AAH71575.1| 69|Homo sapiens FUSIP1 protein protein. 37 0.043
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 36 0.075
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 36 0.075
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 36 0.075
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 36 0.075
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 36 0.075
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 36 0.075
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 36 0.099
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 36 0.099
AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif prote... 36 0.099
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 36 0.099
AK128140-1|BAC87294.1| 280|Homo sapiens protein ( Homo sapiens ... 36 0.099
AK125824-1|BAC86307.1| 280|Homo sapiens protein ( Homo sapiens ... 36 0.099
U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein. 34 0.40
BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1... 34 0.40
BC066549-1|AAH66549.1| 474|Homo sapiens RNA binding motif prote... 33 0.53
BC037837-1|AAH37837.2| 248|Homo sapiens Unknown (protein for MG... 33 0.53
AF526533-1|AAM88417.1| 328|Homo sapiens putative RNA binding pr... 33 0.53
AB036991-1|BAC16207.1| 476|Homo sapiens developmentally regulat... 33 0.53
U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein. 33 0.93
U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protei... 33 0.93
BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein. 33 0.93
AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,... 33 0.93
AL161628-3|CAI13377.1| 189|Homo sapiens ELAV (embryonic lethal,... 33 0.93
AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,... 33 0.93
AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,... 33 0.93
AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific heterog... 33 0.93
AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,... 33 0.93
U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein p... 32 1.2
M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein. 32 1.2
BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,... 32 1.2
BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein. 32 1.2
BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,... 32 1.2
AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein. 32 1.2
AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein. 32 1.2
AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein. 32 1.2
AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein. 32 1.2
AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,... 32 1.2
AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,... 32 1.2
AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,... 32 1.2
AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,... 32 1.2
AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,... 32 1.2
AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,... 32 1.2
AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,... 32 1.2
AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,... 32 1.2
AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,... 32 1.2
AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,... 32 1.2
AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,... 32 1.2
AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,... 32 1.2
BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif prote... 32 1.6
AF069682-1|AAC24858.2| 392|Homo sapiens testes specific heterog... 32 1.6
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 31 3.7
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 31 3.7
U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein. 30 4.9
M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein pr... 30 4.9
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 30 4.9
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 30 4.9
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 30 4.9
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 30 4.9
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 30 4.9
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 30 4.9
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 30 4.9
BC125129-1|AAI25130.1| 892|Homo sapiens zinc finger protein 512... 30 6.5
BC125128-1|AAI25129.1| 892|Homo sapiens zinc finger protein 512... 30 6.5
BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation fa... 30 6.5
AY358197-1|AAQ88564.1| 541|Homo sapiens PGLR9388 protein. 30 6.5
AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein. 30 6.5
AL118506-12|CAC15498.3| 892|Homo sapiens RP4-591C20.6 protein. 30 6.5
AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation fa... 30 6.5
AK056789-1|BAB71285.1| 541|Homo sapiens protein ( Homo sapiens ... 30 6.5
AB033022-1|BAA86510.1| 851|Homo sapiens KIAA1196 protein protein. 30 6.5
Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation fact... 29 8.6
Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation fact... 29 8.6
Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation fact... 29 8.6
M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation fact... 29 8.6
BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation fa... 29 8.6
BC105582-1|AAI05583.1| 173|Homo sapiens RBMX2 protein protein. 29 8.6
BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif prote... 29 8.6
BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage sti... 29 8.6
BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation fa... 29 8.6
BC003676-1|AAH03676.1| 163|Homo sapiens Unknown (protein for IM... 29 8.6
AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein pr... 29 8.6
AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif prote... 29 8.6
AF151837-1|AAD34074.1| 351|Homo sapiens CGI-79 protein protein. 29 8.6
>X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein.
Length = 221
Score = 86.6 bits (205), Expect = 5e-17
Identities = 39/67 (58%), Positives = 49/67 (73%)
Frame = +1
Query: 151 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGR 330
RT+P+ LRRVFE+ G VGD+YIPRDRYT+ES E+A+D++DG +LDGR
Sbjct: 24 RTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGR 83
Query: 331 ELRVQMA 351
ELRVQMA
Sbjct: 84 ELRVQMA 90
Score = 45.2 bits (102), Expect = 2e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 81 MSYGRPPPRIDGMVSLKVDHLTY 149
MSYGRPPP ++GM SLKVD+LTY
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTY 23
>X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein.
Length = 221
Score = 86.6 bits (205), Expect = 5e-17
Identities = 39/67 (58%), Positives = 49/67 (73%)
Frame = +1
Query: 151 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGR 330
RT+P+ LRRVFE+ G VGD+YIPRDRYT+ES E+A+D++DG +LDGR
Sbjct: 24 RTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGR 83
Query: 331 ELRVQMA 351
ELRVQMA
Sbjct: 84 ELRVQMA 90
Score = 45.2 bits (102), Expect = 2e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 81 MSYGRPPPRIDGMVSLKVDHLTY 149
MSYGRPPP ++GM SLKVD+LTY
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTY 23
>BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 86.6 bits (205), Expect = 5e-17
Identities = 39/67 (58%), Positives = 49/67 (73%)
Frame = +1
Query: 151 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGR 330
RT+P+ LRRVFE+ G VGD+YIPRDRYT+ES E+A+D++DG +LDGR
Sbjct: 24 RTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGR 83
Query: 331 ELRVQMA 351
ELRVQMA
Sbjct: 84 ELRVQMA 90
Score = 45.2 bits (102), Expect = 2e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 81 MSYGRPPPRIDGMVSLKVDHLTY 149
MSYGRPPP ++GM SLKVD+LTY
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTY 23
>BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 86.6 bits (205), Expect = 5e-17
Identities = 39/67 (58%), Positives = 49/67 (73%)
Frame = +1
Query: 151 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGR 330
RT+P+ LRRVFE+ G VGD+YIPRDRYT+ES E+A+D++DG +LDGR
Sbjct: 24 RTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGR 83
Query: 331 ELRVQMA 351
ELRVQMA
Sbjct: 84 ELRVQMA 90
Score = 45.2 bits (102), Expect = 2e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 81 MSYGRPPPRIDGMVSLKVDHLTY 149
MSYGRPPP ++GM SLKVD+LTY
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTY 23
>BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 86.6 bits (205), Expect = 5e-17
Identities = 39/67 (58%), Positives = 49/67 (73%)
Frame = +1
Query: 151 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGR 330
RT+P+ LRRVFE+ G VGD+YIPRDRYT+ES E+A+D++DG +LDGR
Sbjct: 24 RTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGR 83
Query: 331 ELRVQMA 351
ELRVQMA
Sbjct: 84 ELRVQMA 90
Score = 45.2 bits (102), Expect = 2e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 81 MSYGRPPPRIDGMVSLKVDHLTY 149
MSYGRPPP ++GM SLKVD+LTY
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTY 23
>BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 86.6 bits (205), Expect = 5e-17
Identities = 39/67 (58%), Positives = 49/67 (73%)
Frame = +1
Query: 151 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGR 330
RT+P+ LRRVFE+ G VGD+YIPRDRYT+ES E+A+D++DG +LDGR
Sbjct: 24 RTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGR 83
Query: 331 ELRVQMA 351
ELRVQMA
Sbjct: 84 ELRVQMA 90
Score = 45.2 bits (102), Expect = 2e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 81 MSYGRPPPRIDGMVSLKVDHLTY 149
MSYGRPPP ++GM SLKVD+LTY
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTY 23
>AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 variant protein.
Length = 221
Score = 86.6 bits (205), Expect = 5e-17
Identities = 39/67 (58%), Positives = 49/67 (73%)
Frame = +1
Query: 151 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGR 330
RT+P+ LRRVFE+ G VGD+YIPRDRYT+ES E+A+D++DG +LDGR
Sbjct: 24 RTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGR 83
Query: 331 ELRVQMA 351
ELRVQMA
Sbjct: 84 ELRVQMA 90
Score = 45.2 bits (102), Expect = 2e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 81 MSYGRPPPRIDGMVSLKVDHLTY 149
MSYGRPPP ++GM SLKVD+LTY
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTY 23
>AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ35170 fis, clone PLACE6012942, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 201
Score = 86.6 bits (205), Expect = 5e-17
Identities = 39/67 (58%), Positives = 49/67 (73%)
Frame = +1
Query: 151 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGR 330
RT+P+ LRRVFE+ G VGD+YIPRDRYT+ES E+A+D++DG +LDGR
Sbjct: 24 RTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGR 83
Query: 331 ELRVQMA 351
ELRVQMA
Sbjct: 84 ELRVQMA 90
Score = 45.2 bits (102), Expect = 2e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 81 MSYGRPPPRIDGMVSLKVDHLTY 149
MSYGRPPP ++GM SLKVD+LTY
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTY 23
>M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein.
Length = 221
Score = 83.4 bits (197), Expect = 5e-16
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = +1
Query: 151 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGR 330
RT+P+ LRRVFE+ VGD+YIPRDRYT+ES E+A+D++DG +LDGR
Sbjct: 24 RTSPDTLRRVFEKYRRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGR 83
Query: 331 ELRVQMA 351
ELRVQMA
Sbjct: 84 ELRVQMA 90
Score = 46.0 bits (104), Expect = 9e-05
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +3
Query: 81 MSYGRPPPRIDGMVSLKVDHLTYXXXXXXXXXXI*KMRR 197
MSYGRPPP ++GM SLKVD+LTY K RR
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYRR 39
>BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein.
Length = 275
Score = 66.9 bits (156), Expect = 5e-11
Identities = 31/67 (46%), Positives = 43/67 (64%)
Frame = +1
Query: 151 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGR 330
RT+P+ LRRVFE+ G VGD+YIPR+ +T+ ++A ++DG LDGR
Sbjct: 24 RTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELDGR 83
Query: 331 ELRVQMA 351
ELRVQ+A
Sbjct: 84 ELRVQVA 90
Score = 43.2 bits (97), Expect = 7e-04
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +3
Query: 81 MSYGRPPPRIDGMVSLKVDHLTY 149
MS GRPPP +DGM++LKVD+LTY
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTY 23
>AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor
protein.
Length = 272
Score = 66.9 bits (156), Expect = 5e-11
Identities = 31/67 (46%), Positives = 43/67 (64%)
Frame = +1
Query: 151 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGR 330
RT+P+ LRRVFE+ G VGD+YIPR+ +T+ ++A ++DG LDGR
Sbjct: 14 RTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELDGR 73
Query: 331 ELRVQMA 351
ELRVQ+A
Sbjct: 74 ELRVQVA 80
>AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor
protein.
Length = 282
Score = 66.9 bits (156), Expect = 5e-11
Identities = 31/67 (46%), Positives = 43/67 (64%)
Frame = +1
Query: 151 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGR 330
RT+P+ LRRVFE+ G VGD+YIPR+ +T+ ++A ++DG LDGR
Sbjct: 24 RTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELDGR 83
Query: 331 ELRVQMA 351
ELRVQ+A
Sbjct: 84 ELRVQVA 90
Score = 43.2 bits (97), Expect = 7e-04
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +3
Query: 81 MSYGRPPPRIDGMVSLKVDHLTY 149
MS GRPPP +DGM++LKVD+LTY
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTY 23
>BC066958-1|AAH66958.1| 179|Homo sapiens SFRS2 protein protein.
Length = 179
Score = 65.3 bits (152), Expect = 1e-10
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = +1
Query: 151 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDG 312
RT+P+ LRRVFE+ G VGD+YIPRDRYT+ES E+A+D++DG
Sbjct: 24 RTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 77
Score = 45.2 bits (102), Expect = 2e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 81 MSYGRPPPRIDGMVSLKVDHLTY 149
MSYGRPPP ++GM SLKVD+LTY
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTY 23
>AK093626-1|BAC04206.1| 186|Homo sapiens protein ( Homo sapiens
cDNA FLJ36307 fis, clone THYMU2004906, moderately
similar to SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 186
Score = 65.3 bits (152), Expect = 1e-10
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = +1
Query: 151 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDG 312
RT+P+ LRRVFE+ G VGD+YIPRDRYT+ES E+A+D++DG
Sbjct: 24 RTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 77
Score = 45.2 bits (102), Expect = 2e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 81 MSYGRPPPRIDGMVSLKVDHLTY 149
MSYGRPPP ++GM SLKVD+LTY
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTY 23
>BC021715-1|AAH21715.1| 261|Homo sapiens serine-arginine repressor
protein (35 kDa) protein.
Length = 261
Score = 52.4 bits (120), Expect = 1e-06
Identities = 26/66 (39%), Positives = 36/66 (54%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T PEDLRR F R G + D+YIP D YTR E+AL +L+ + + GR+
Sbjct: 21 TRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRGAEDALYNLNRKWVCGRQ 80
Query: 334 LRVQMA 351
+ +Q A
Sbjct: 81 IEIQFA 86
>AF449428-1|AAL57515.1| 261|Homo sapiens SRrp35 protein.
Length = 261
Score = 52.4 bits (120), Expect = 1e-06
Identities = 26/66 (39%), Positives = 36/66 (54%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T PEDLRR F R G + D+YIP D YTR E+AL +L+ + + GR+
Sbjct: 21 TRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNRKWVCGRQ 80
Query: 334 LRVQMA 351
+ +Q A
Sbjct: 81 IEIQFA 86
>BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein.
Length = 173
Score = 52.0 bits (119), Expect = 1e-06
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T EDLRR F R G + D+Y+P D YTR E+AL +LD + + GR+
Sbjct: 21 TRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQ 80
Query: 334 LRVQMA 351
+ +Q A
Sbjct: 81 IEIQFA 86
>BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 262
Score = 52.0 bits (119), Expect = 1e-06
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T EDLRR F R G + D+Y+P D YTR E+AL +LD + + GR+
Sbjct: 21 TRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQ 80
Query: 334 LRVQMA 351
+ +Q A
Sbjct: 81 IEIQFA 86
>BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 183
Score = 52.0 bits (119), Expect = 1e-06
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T EDLRR F R G + D+Y+P D YTR E+AL +LD + + GR+
Sbjct: 21 TRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQ 80
Query: 334 LRVQMA 351
+ +Q A
Sbjct: 81 IEIQFA 86
>AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2
protein.
Length = 183
Score = 52.0 bits (119), Expect = 1e-06
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T EDLRR F R G + D+Y+P D YTR E+AL +LD + + GR+
Sbjct: 21 TRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQ 80
Query: 334 LRVQMA 351
+ +Q A
Sbjct: 81 IEIQFA 86
>AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38
protein.
Length = 262
Score = 52.0 bits (119), Expect = 1e-06
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T EDLRR F R G + D+Y+P D YTR E+AL +LD + + GR+
Sbjct: 21 TRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQ 80
Query: 334 LRVQMA 351
+ +Q A
Sbjct: 81 IEIQFA 86
>AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR protein
2 protein.
Length = 262
Score = 52.0 bits (119), Expect = 1e-06
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T EDLRR F R G + D+Y+P D YTR E+AL +LD + + GR+
Sbjct: 21 TRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQ 80
Query: 334 LRVQMA 351
+ +Q A
Sbjct: 81 IEIQFA 86
>AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR protein
1 protein.
Length = 183
Score = 52.0 bits (119), Expect = 1e-06
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T EDLRR F R G + D+Y+P D YTR E+AL +LD + + GR+
Sbjct: 21 TRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQ 80
Query: 334 LRVQMA 351
+ +Q A
Sbjct: 81 IEIQFA 86
>AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 262
Score = 52.0 bits (119), Expect = 1e-06
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T EDLRR F R G + D+Y+P D YTR E+AL +LD + + GR+
Sbjct: 21 TRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQ 80
Query: 334 LRVQMA 351
+ +Q A
Sbjct: 81 IEIQFA 86
>AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 261
Score = 52.0 bits (119), Expect = 1e-06
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T EDLRR F R G + D+Y+P D YTR E+AL +LD + + GR+
Sbjct: 21 TRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQ 80
Query: 334 LRVQMA 351
+ +Q A
Sbjct: 81 IEIQFA 86
>AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 173
Score = 52.0 bits (119), Expect = 1e-06
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T EDLRR F R G + D+Y+P D YTR E+AL +LD + + GR+
Sbjct: 21 TRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQ 80
Query: 334 LRVQMA 351
+ +Q A
Sbjct: 81 IEIQFA 86
>AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 172
Score = 52.0 bits (119), Expect = 1e-06
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T EDLRR F R G + D+Y+P D YTR E+AL +LD + + GR+
Sbjct: 21 TRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQ 80
Query: 334 LRVQMA 351
+ +Q A
Sbjct: 81 IEIQFA 86
>AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 183
Score = 52.0 bits (119), Expect = 1e-06
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T EDLRR F R G + D+Y+P D YTR E+AL +LD + + GR+
Sbjct: 21 TRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQ 80
Query: 334 LRVQMA 351
+ +Q A
Sbjct: 81 IEIQFA 86
>AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 182
Score = 52.0 bits (119), Expect = 1e-06
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T EDLRR F R G + D+Y+P D YTR E+AL +LD + + GR+
Sbjct: 21 TRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQ 80
Query: 334 LRVQMA 351
+ +Q A
Sbjct: 81 IEIQFA 86
>AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein
(serine-arginine rich) 1 isoform 2 variant protein.
Length = 262
Score = 52.0 bits (119), Expect = 1e-06
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T EDLRR F R G + D+Y+P D YTR E+AL +LD + + GR+
Sbjct: 21 TRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQ 80
Query: 334 LRVQMA 351
+ +Q A
Sbjct: 81 IEIQFA 86
>AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens
cDNA FLJ10424 fis, clone NT2RP1000272, highly similar to
Homo sapiens TLS-associated protein TASR-2 mRNA. ).
Length = 183
Score = 52.0 bits (119), Expect = 1e-06
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T EDLRR F R G + D+Y+P D YTR E+AL +LD + + GR+
Sbjct: 21 TRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQ 80
Query: 334 LRVQMA 351
+ +Q A
Sbjct: 81 IEIQFA 86
>AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein.
Length = 262
Score = 52.0 bits (119), Expect = 1e-06
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T EDLRR F R G + D+Y+P D YTR E+AL +LD + + GR+
Sbjct: 21 TRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQ 80
Query: 334 LRVQMA 351
+ +Q A
Sbjct: 81 IEIQFA 86
>AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 261
Score = 52.0 bits (119), Expect = 1e-06
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T EDLRR F R G + D+Y+P D YTR E+AL +LD + + GR+
Sbjct: 21 TRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQ 80
Query: 334 LRVQMA 351
+ +Q A
Sbjct: 81 IEIQFA 86
>AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein
TASR-1 protein.
Length = 183
Score = 52.0 bits (119), Expect = 1e-06
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T EDLRR F R G + D+Y+P D YTR E+AL +LD + + GR+
Sbjct: 21 TRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQ 80
Query: 334 LRVQMA 351
+ +Q A
Sbjct: 81 IEIQFA 86
>AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 262
Score = 52.0 bits (119), Expect = 1e-06
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T EDLRR F R G + D+Y+P D YTR E+AL +LD + + GR+
Sbjct: 21 TRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQ 80
Query: 334 LRVQMA 351
+ +Q A
Sbjct: 81 IEIQFA 86
>AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein
TASR protein.
Length = 183
Score = 52.0 bits (119), Expect = 1e-06
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T EDLRR F R G + D+Y+P D YTR E+AL +LD + + GR+
Sbjct: 21 TRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQ 80
Query: 334 LRVQMA 351
+ +Q A
Sbjct: 81 IEIQFA 86
>AL353135-4|CAI16247.1| 262|Homo sapiens RP11-63L7.3 protein.
Length = 262
Score = 48.0 bits (109), Expect = 2e-05
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRE-SXXXXXXXXXXXXXXEEALDSLDGRMLDGR 330
T PEDLRR F R G + D+YIP D YTR E+AL +L+ + + GR
Sbjct: 21 TRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDALYNLNRKWVCGR 80
Query: 331 ELRVQMA 351
++ +Q A
Sbjct: 81 QIEIQFA 87
>L03693-1|AAA60162.1| 34|Homo sapiens splicing factor protein.
Length = 34
Score = 45.2 bits (102), Expect = 2e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 81 MSYGRPPPRIDGMVSLKVDHLTY 149
MSYGRPPP ++GM SLKVD+LTY
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTY 23
>D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 43.6 bits (98), Expect = 5e-04
Identities = 17/66 (25%), Positives = 37/66 (56%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T + L +VF + G++ ++ + +DR T+ S ++A+ +++G+ +DGR+
Sbjct: 17 TNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQ 76
Query: 334 LRVQMA 351
+RV A
Sbjct: 77 IRVDQA 82
>BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 43.6 bits (98), Expect = 5e-04
Identities = 17/66 (25%), Positives = 37/66 (56%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T + L +VF + G++ ++ + +DR T+ S ++A+ +++G+ +DGR+
Sbjct: 17 TNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQ 76
Query: 334 LRVQMA 351
+RV A
Sbjct: 77 IRVDQA 82
>BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 43.6 bits (98), Expect = 5e-04
Identities = 17/66 (25%), Positives = 37/66 (56%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T + L +VF + G++ ++ + +DR T+ S ++A+ +++G+ +DGR+
Sbjct: 17 TNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQ 76
Query: 334 LRVQMA 351
+RV A
Sbjct: 77 IRVDQA 82
>BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 43.6 bits (98), Expect = 5e-04
Identities = 17/66 (25%), Positives = 37/66 (56%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T + L +VF + G++ ++ + +DR T+ S ++A+ +++G+ +DGR+
Sbjct: 17 TNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQ 76
Query: 334 LRVQMA 351
+RV A
Sbjct: 77 IRVDQA 82
>AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RNA
binding protein protein.
Length = 172
Score = 43.6 bits (98), Expect = 5e-04
Identities = 17/66 (25%), Positives = 37/66 (56%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T + L +VF + G++ ++ + +DR T+ S ++A+ +++G+ +DGR+
Sbjct: 17 TNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQ 76
Query: 334 LRVQMA 351
+RV A
Sbjct: 77 IRVDQA 82
>AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 43.6 bits (98), Expect = 5e-04
Identities = 17/66 (25%), Positives = 37/66 (56%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T + L +VF + G++ ++ + +DR T+ S ++A+ +++G+ +DGR+
Sbjct: 17 TNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQ 76
Query: 334 LRVQMA 351
+RV A
Sbjct: 77 IRVDQA 82
>CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein.
Length = 357
Score = 37.5 bits (83), Expect = 0.033
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T ED +R+FER GE +++I RDR E A LDG +L R L
Sbjct: 58 TEEDFKRLFERYGEPSEVFINRDR------GFGFIRLESRTLAEIAKAELDGTILKSRPL 111
Query: 337 RVQMA 351
R++ A
Sbjct: 112 RIRFA 116
>BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein.
Length = 393
Score = 37.5 bits (83), Expect = 0.033
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T ED +R+FER GE +++I RDR E A LDG +L R L
Sbjct: 94 TEEDFKRLFERYGEPSEVFINRDR------GFGFIRLESRTLAEIAKAELDGTILKSRPL 147
Query: 337 RVQMA 351
R++ A
Sbjct: 148 RIRFA 152
>AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1
protein.
Length = 248
Score = 37.5 bits (83), Expect = 0.033
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T ED +R+FER GE +++I RDR E A LDG +L R L
Sbjct: 94 TEEDFKRLFERYGEPSEVFINRDR------GFGFIRLESRTLAEIAKAELDGTILKSRPL 147
Query: 337 RVQMA 351
R++ A
Sbjct: 148 RIRFA 152
>AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1
protein.
Length = 523
Score = 37.5 bits (83), Expect = 0.033
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T ED +R+FER GE +++I RDR E A LDG +L R L
Sbjct: 94 TEEDFKRLFERYGEPSEVFINRDR------GFGFIRLESRTLAEIAKAELDGTILKSRPL 147
Query: 337 RVQMA 351
R++ A
Sbjct: 148 RIRFA 152
>AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ10955 fis, clone PLACE1000406, moderately
similar to PTB-ASSOCIATED SPLICING FACTOR. ).
Length = 357
Score = 37.5 bits (83), Expect = 0.033
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T ED +R+FER GE +++I RDR E A LDG +L R L
Sbjct: 58 TEEDFKRLFERYGEPSEVFINRDR------GFGFIRLESRTLAEIAKAELDGTILKSRPL 111
Query: 337 RVQMA 351
R++ A
Sbjct: 112 RIRFA 116
>AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 beta
isoform protein.
Length = 393
Score = 37.5 bits (83), Expect = 0.033
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T ED +R+FER GE +++I RDR E A LDG +L R L
Sbjct: 94 TEEDFKRLFERYGEPSEVFINRDR------GFGFIRLESRTLAEIAKAELDGTILKSRPL 147
Query: 337 RVQMA 351
R++ A
Sbjct: 148 RIRFA 152
>AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1
alpha isoform protein.
Length = 523
Score = 37.5 bits (83), Expect = 0.033
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T ED +R+FER GE +++I RDR E A LDG +L R L
Sbjct: 94 TEEDFKRLFERYGEPSEVFINRDR------GFGFIRLESRTLAEIAKAELDGTILKSRPL 147
Query: 337 RVQMA 351
R++ A
Sbjct: 148 RIRFA 152
>BC071575-1|AAH71575.1| 69|Homo sapiens FUSIP1 protein protein.
Length = 69
Score = 37.1 bits (82), Expect = 0.043
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTR 237
T EDLRR F R G + D+Y+P D YTR
Sbjct: 21 TRSEDLRREFGRYGPIVDVYVPLDFYTR 48
>Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein.
Length = 391
Score = 36.3 bits (80), Expect = 0.075
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T + L VF + G + ++ + +DR T +S ++A ++G+ LDG+
Sbjct: 19 TNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKA 78
Query: 334 LRVQMA 351
++V+ A
Sbjct: 79 IKVEQA 84
>BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 36.3 bits (80), Expect = 0.075
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T + L VF + G + ++ + +DR T +S ++A ++G+ LDG+
Sbjct: 19 TNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKA 78
Query: 334 LRVQMA 351
++V+ A
Sbjct: 79 IKVEQA 84
>BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 36.3 bits (80), Expect = 0.075
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T + L VF + G + ++ + +DR T +S ++A ++G+ LDG+
Sbjct: 19 TNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKA 78
Query: 334 LRVQMA 351
++V+ A
Sbjct: 79 IKVEQA 84
>AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear
ribonucleoprotein G protein.
Length = 391
Score = 36.3 bits (80), Expect = 0.075
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T + L VF + G + ++ + +DR T +S ++A ++G+ LDG+
Sbjct: 19 TNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKA 78
Query: 334 LRVQMA 351
++V+ A
Sbjct: 79 IKVEQA 84
>AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 36.3 bits (80), Expect = 0.075
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T + L VF + G + ++ + +DR T +S ++A ++G+ LDG+
Sbjct: 19 TNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKA 78
Query: 334 LRVQMA 351
++V+ A
Sbjct: 79 IKVEQA 84
>AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein.
Length = 391
Score = 36.3 bits (80), Expect = 0.075
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T + L VF + G + ++ + +DR T +S ++A ++G+ LDG+
Sbjct: 19 TNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKA 78
Query: 334 LRVQMA 351
++V+ A
Sbjct: 79 IKVEQA 84
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 35.9 bits (79), Expect = 0.099
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T + L VF + G + ++ + +DR T +S ++A ++G+ LDG+
Sbjct: 19 TNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKA 78
Query: 334 LRVQMA 351
++V+ A
Sbjct: 79 IKVEQA 84
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 35.9 bits (79), Expect = 0.099
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T + L VF + G + ++ + +DR T +S ++A ++G+ LDG+
Sbjct: 19 TNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKA 78
Query: 334 LRVQMA 351
++V+ A
Sbjct: 79 IKVEQA 84
>AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 159
Score = 35.9 bits (79), Expect = 0.099
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T + L VF + G + ++ + +DR T +S ++A ++G+ LDG+
Sbjct: 19 TNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKA 78
Query: 334 LRVQMA 351
++V+ A
Sbjct: 79 IKVEQA 84
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 35.9 bits (79), Expect = 0.099
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T + L VF + G + ++ + +DR T +S ++A ++G+ LDG+
Sbjct: 19 TNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKA 78
Query: 334 LRVQMA 351
++V+ A
Sbjct: 79 IKVEQA 84
>AK128140-1|BAC87294.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ46261 fis, clone TESTI4025062. ).
Length = 280
Score = 35.9 bits (79), Expect = 0.099
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -1
Query: 562 NGSGCDCENGRASSWSRSVSGTATDPGCG-CASTNASATSNGTWSDDVNETVNGCVCGR 389
+ + C C + SS S S + T C C S+ S+TS +WS + T + C+ R
Sbjct: 96 SSTSCSCWSSGTSSTSWSCKSSGTSSTCYMCLSSGTSSTSYSSWSSQTSSTSSMCLPSR 154
Score = 33.1 bits (72), Expect = 0.70
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -1
Query: 550 CDCENGRASSWSRSV--SGTATDPGCGCASTNASATSNGTWSDDVNETVNGC 401
C C + S S S SGT++ P C C S+ S+TS WS + T C
Sbjct: 64 CSCWSSGTSFTSCSCWSSGTSSTP-CSCRSSGTSSTSCSCWSSGTSSTSWSC 114
>AK125824-1|BAC86307.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ43836 fis, clone TESTI4005857. ).
Length = 280
Score = 35.9 bits (79), Expect = 0.099
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -1
Query: 562 NGSGCDCENGRASSWSRSVSGTATDPGCG-CASTNASATSNGTWSDDVNETVNGCVCGR 389
+ + C C + SS S S + T C C S+ S+TS +WS + T + C+ R
Sbjct: 96 SSTSCSCWSSGTSSTSWSCKSSGTSSTCYMCLSSGTSSTSYSSWSSQTSSTSSMCLPSR 154
Score = 33.1 bits (72), Expect = 0.70
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -1
Query: 550 CDCENGRASSWSRSV--SGTATDPGCGCASTNASATSNGTWSDDVNETVNGC 401
C C + S S S SGT++ P C C S+ S+TS WS + T C
Sbjct: 64 CSCWSSGTSFTSCSCWSSGTSSTP-CSCRSSGTSSTSCSCWSSGTSSTSWSC 114
>U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein.
Length = 157
Score = 33.9 bits (74), Expect = 0.40
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T + L F G + ++ + +DR T+ S A+ +++G LDGR+
Sbjct: 17 TDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQ 76
Query: 334 LRVQMA 351
+RV A
Sbjct: 77 IRVDHA 82
>BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1,
RRM) protein 3 protein.
Length = 157
Score = 33.9 bits (74), Expect = 0.40
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T + L F G + ++ + +DR T+ S A+ +++G LDGR+
Sbjct: 17 TDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQ 76
Query: 334 LRVQMA 351
+RV A
Sbjct: 77 IRVDHA 82
>BC066549-1|AAH66549.1| 474|Homo sapiens RNA binding motif protein
45 protein.
Length = 474
Score = 33.5 bits (73), Expect = 0.53
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 157 TPED-LRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRML 321
TPE LR F G++ DI++ RD++T+ES A++ + G+ L
Sbjct: 36 TPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCL 91
>BC037837-1|AAH37837.2| 248|Homo sapiens Unknown (protein for
MGC:42237) protein.
Length = 248
Score = 33.5 bits (73), Expect = 0.53
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 157 TPED-LRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRML 321
TPE LR F G++ DI++ RD++T+ES A++ + G+ L
Sbjct: 36 TPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCL 91
>AF526533-1|AAM88417.1| 328|Homo sapiens putative RNA binding
protein RB-1 protein.
Length = 328
Score = 33.5 bits (73), Expect = 0.53
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 157 TPED-LRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRML 321
TPE LR F G++ DI++ RD++T+ES A++ + G+ L
Sbjct: 36 TPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCL 91
>AB036991-1|BAC16207.1| 476|Homo sapiens developmentally regulated
RNA-binding protein 1 protein.
Length = 476
Score = 33.5 bits (73), Expect = 0.53
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 157 TPED-LRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRML 321
TPE LR F G++ DI++ RD++T+ES A++ + G+ L
Sbjct: 36 TPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCL 91
>U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein.
Length = 346
Score = 32.7 bits (71), Expect = 0.93
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+L+ +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 51 TQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 110
Query: 337 RVQMA 351
+V A
Sbjct: 111 KVSYA 115
>U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protein 1
protein.
Length = 359
Score = 32.7 bits (71), Expect = 0.93
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+L+ +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 51 TQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 110
Query: 337 RVQMA 351
+V A
Sbjct: 111 KVSYA 115
>BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein.
Length = 346
Score = 32.7 bits (71), Expect = 0.93
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+L+ +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 51 TQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 110
Query: 337 RVQMA 351
+V A
Sbjct: 111 KVSYA 115
>AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 387
Score = 32.7 bits (71), Expect = 0.93
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+L+ +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 79 TQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 138
Query: 337 RVQMA 351
+V A
Sbjct: 139 KVSYA 143
>AL161628-3|CAI13377.1| 189|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 189
Score = 32.7 bits (71), Expect = 0.93
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+L+ +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 51 TQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 110
Query: 337 RVQMA 351
+V A
Sbjct: 111 KVSYA 115
>AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 359
Score = 32.7 bits (71), Expect = 0.93
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+L+ +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 51 TQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 110
Query: 337 RVQMA 351
+V A
Sbjct: 111 KVSYA 115
>AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 346
Score = 32.7 bits (71), Expect = 0.93
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+L+ +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 51 TQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 110
Query: 337 RVQMA 351
+V A
Sbjct: 111 KVSYA 115
>AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 386
Score = 32.7 bits (71), Expect = 0.93
Identities = 15/68 (22%), Positives = 32/68 (47%)
Frame = +1
Query: 148 IRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDG 327
+ T + L F + G + ++ + +DR T +S + A+ ++G+ LDG
Sbjct: 11 LETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAVRDMNGKSLDG 70
Query: 328 RELRVQMA 351
+ ++V A
Sbjct: 71 KAIKVAQA 78
>AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B) vari
protein.
Length = 367
Score = 32.7 bits (71), Expect = 0.93
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+L+ +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 59 TQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 118
Query: 337 RVQMA 351
+V A
Sbjct: 119 KVSYA 123
>U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein
protein.
Length = 326
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T ++LR +F GEV + RD+ S E A+++L+G L + +
Sbjct: 32 TQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTI 91
Query: 337 RVQMA 351
+V A
Sbjct: 92 KVSYA 96
>M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein.
Length = 380
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+ R +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 58 TQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 117
Query: 337 RVQMA 351
+V A
Sbjct: 118 KVSYA 122
>BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T ++LR +F GEV + RD+ S E A+++L+G L + +
Sbjct: 32 TQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTI 91
Query: 337 RVQMA 351
+V A
Sbjct: 92 KVSYA 96
>BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein.
Length = 366
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+ R +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 58 TQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 117
Query: 337 RVQMA 351
+V A
Sbjct: 118 KVSYA 122
>BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T ++LR +F GEV + RD+ S E A+++L+G L + +
Sbjct: 32 TQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTI 91
Query: 337 RVQMA 351
+V A
Sbjct: 92 KVSYA 96
>AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein.
Length = 380
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+ R +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 58 TQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 117
Query: 337 RVQMA 351
+V A
Sbjct: 118 KVSYA 122
>AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein.
Length = 366
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+ R +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 58 TQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 117
Query: 337 RVQMA 351
+V A
Sbjct: 118 KVSYA 122
>AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein.
Length = 383
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+ R +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 75 TQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 134
Query: 337 RVQMA 351
+V A
Sbjct: 135 KVSYA 139
>AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein.
Length = 366
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+ R +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 58 TQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 117
Query: 337 RVQMA 351
+V A
Sbjct: 118 KVSYA 122
>AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+ R +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 63 TQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 122
Query: 337 RVQMA 351
+V A
Sbjct: 123 KVSYA 127
>AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+ R +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 63 TQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 122
Query: 337 RVQMA 351
+V A
Sbjct: 123 KVSYA 127
>AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+ R +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 58 TQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 117
Query: 337 RVQMA 351
+V A
Sbjct: 118 KVSYA 122
>AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+ R +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 58 TQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 117
Query: 337 RVQMA 351
+V A
Sbjct: 118 KVSYA 122
>AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+ R +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 75 TQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 134
Query: 337 RVQMA 351
+V A
Sbjct: 135 KVSYA 139
>AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+ R +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 58 TQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 117
Query: 337 RVQMA 351
+V A
Sbjct: 118 KVSYA 122
>AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+ R +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 63 TQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 122
Query: 337 RVQMA 351
+V A
Sbjct: 123 KVSYA 127
>AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+ R +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 63 TQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 122
Query: 337 RVQMA 351
+V A
Sbjct: 123 KVSYA 127
>AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+ R +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 58 TQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 117
Query: 337 RVQMA 351
+V A
Sbjct: 118 KVSYA 122
>AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+ R +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 58 TQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 117
Query: 337 RVQMA 351
+V A
Sbjct: 118 KVSYA 122
>AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+ R +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 75 TQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 134
Query: 337 RVQMA 351
+V A
Sbjct: 135 KVSYA 139
>AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E+ R +F GE+ + RD+ T +S E+A+++L+G L + +
Sbjct: 58 TQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTI 117
Query: 337 RVQMA 351
+V A
Sbjct: 118 KVSYA 122
>BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif protein,
X-linked-like 2 protein.
Length = 392
Score = 31.9 bits (69), Expect = 1.6
Identities = 15/68 (22%), Positives = 31/68 (45%)
Frame = +1
Query: 148 IRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDG 327
+ T + L F + G + ++ + +DR T +S + A ++G+ LDG
Sbjct: 17 LETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDMNGKSLDG 76
Query: 328 RELRVQMA 351
+ ++V A
Sbjct: 77 KAIKVAQA 84
>AF069682-1|AAC24858.2| 392|Homo sapiens testes specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 392
Score = 31.9 bits (69), Expect = 1.6
Identities = 15/68 (22%), Positives = 31/68 (45%)
Frame = +1
Query: 148 IRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDG 327
+ T + L F + G + ++ + +DR T +S + A ++G+ LDG
Sbjct: 17 LETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDMNGKSLDG 76
Query: 328 RELRVQMA 351
+ ++V A
Sbjct: 77 KAIKVAQA 84
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 30.7 bits (66), Expect = 3.7
Identities = 21/80 (26%), Positives = 29/80 (36%)
Frame = -1
Query: 556 SGCDCENGRASSWSRSVSGTATDPGCGCASTNASATSNGTWSDDVNETVNGCVCGRICFC 377
SGC C +G G + C C N +S D N C C R +
Sbjct: 173 SGCVCPDGLMDDGR---GGCVVEKECPCVHNNDLYSSGAKIKVDCNT----CTCKRGRWV 225
Query: 376 RVMRVCHNAPSVLGAPYRLT 317
VCH S+ G+ + +T
Sbjct: 226 CTQAVCHGTCSIYGSGHYIT 245
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 30.7 bits (66), Expect = 3.7
Identities = 21/80 (26%), Positives = 29/80 (36%)
Frame = -1
Query: 556 SGCDCENGRASSWSRSVSGTATDPGCGCASTNASATSNGTWSDDVNETVNGCVCGRICFC 377
SGC C +G G + C C N +S D N C C R +
Sbjct: 798 SGCVCPDGLMDDGR---GGCVVEKECPCVHNNDLYSSGAKIKVDCNT----CTCKRGRWV 850
Query: 376 RVMRVCHNAPSVLGAPYRLT 317
VCH S+ G+ + +T
Sbjct: 851 CTQAVCHGTCSIYGSGHYIT 870
>U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein.
Length = 331
Score = 30.3 bits (65), Expect = 4.9
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS----LDGRML 321
T+ +DL+ F + GEV D I D T S E+ LD LDGR++
Sbjct: 79 TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVI 138
Query: 322 DGRE 333
D ++
Sbjct: 139 DPKK 142
>M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein
protein.
Length = 284
Score = 30.3 bits (65), Expect = 4.9
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS----LDGRML 321
T+ +DL+ F + GEV D I D T S E+ LD LDGR++
Sbjct: 79 TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVI 138
Query: 322 DGRE 333
D ++
Sbjct: 139 DPKK 142
>BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 332
Score = 30.3 bits (65), Expect = 4.9
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS----LDGRML 321
T+ +DL+ F + GEV D I D T S E+ LD LDGR++
Sbjct: 81 TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVI 140
Query: 322 DGRE 333
D ++
Sbjct: 141 DPKK 144
>BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 30.3 bits (65), Expect = 4.9
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS----LDGRML 321
T+ +DL+ F + GEV D I D T S E+ LD LDGR++
Sbjct: 81 TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVI 140
Query: 322 DGRE 333
D ++
Sbjct: 141 DPKK 144
>BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 30.3 bits (65), Expect = 4.9
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS----LDGRML 321
T+ +DL+ F + GEV D I D T S E+ LD LDGR++
Sbjct: 81 TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVI 140
Query: 322 DGRE 333
D ++
Sbjct: 141 DPKK 144
>BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 30.3 bits (65), Expect = 4.9
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS----LDGRML 321
T+ +DL+ F + GEV D I D T S E+ LD LDGR++
Sbjct: 81 TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVI 140
Query: 322 DGRE 333
D ++
Sbjct: 141 DPKK 144
>BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 30.3 bits (65), Expect = 4.9
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS----LDGRML 321
T+ +DL+ F + GEV D I D T S E+ LD LDGR++
Sbjct: 81 TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVI 140
Query: 322 DGRE 333
D ++
Sbjct: 141 DPKK 144
>AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein AB isoform a variant protein.
Length = 332
Score = 30.3 bits (65), Expect = 4.9
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS----LDGRML 321
T+ +DL+ F + GEV D I D T S E+ LD LDGR++
Sbjct: 81 TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVI 140
Query: 322 DGRE 333
D ++
Sbjct: 141 DPKK 144
>AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ40338 fis, clone TESTI2032067, highly similar to
Rattus norvegicus mRNA for type A/B hnRNP protein p40.
).
Length = 332
Score = 30.3 bits (65), Expect = 4.9
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS----LDGRML 321
T+ +DL+ F + GEV D I D T S E+ LD LDGR++
Sbjct: 81 TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVI 140
Query: 322 DGRE 333
D ++
Sbjct: 141 DPKK 144
>BC125129-1|AAI25130.1| 892|Homo sapiens zinc finger protein 512B
protein.
Length = 892
Score = 29.9 bits (64), Expect = 6.5
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +3
Query: 399 TQPFTVSFTSSLQVPFEVAEAFVLAQPQPGSVAVPLTLRLQELARPFSQSQPLP 560
++P T+ + P +++ + +P P + A+P+T R + +P + S+P+P
Sbjct: 195 SKPVTIGKPVGVSKPIGISKPVSVGRPMPVTKAIPVT-RPVPVTKPVTVSRPMP 247
>BC125128-1|AAI25129.1| 892|Homo sapiens zinc finger protein 512B
protein.
Length = 892
Score = 29.9 bits (64), Expect = 6.5
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +3
Query: 399 TQPFTVSFTSSLQVPFEVAEAFVLAQPQPGSVAVPLTLRLQELARPFSQSQPLP 560
++P T+ + P +++ + +P P + A+P+T R + +P + S+P+P
Sbjct: 195 SKPVTIGKPVGVSKPIGISKPVSVGRPMPVTKAIPVT-RPVPVTKPVTVSRPMP 247
>BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
protein.
Length = 616
Score = 29.9 bits (64), Expect = 6.5
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E L+ +F G V + DR T + A+ +L+GR GR L
Sbjct: 28 TEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRAL 87
Query: 337 RVQMA 351
RV A
Sbjct: 88 RVDNA 92
>AY358197-1|AAQ88564.1| 541|Homo sapiens PGLR9388 protein.
Length = 541
Score = 29.9 bits (64), Expect = 6.5
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1
Query: 565 ENGSGCDCENGRASSWSRSVSGTATDPG 482
E GC C GRASS +R + A+DPG
Sbjct: 39 ERPRGCPC-TGRASSLARDSAAAASDPG 65
>AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein.
Length = 616
Score = 29.9 bits (64), Expect = 6.5
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E L+ +F G V + DR T + A+ +L+GR GR L
Sbjct: 28 TEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRAL 87
Query: 337 RVQMA 351
RV A
Sbjct: 88 RVDNA 92
>AL118506-12|CAC15498.3| 892|Homo sapiens RP4-591C20.6 protein.
Length = 892
Score = 29.9 bits (64), Expect = 6.5
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +3
Query: 399 TQPFTVSFTSSLQVPFEVAEAFVLAQPQPGSVAVPLTLRLQELARPFSQSQPLP 560
++P T+ + P +++ + +P P + A+P+T R + +P + S+P+P
Sbjct: 195 SKPVTIGKPVGVSKPIGISKPVSVGRPMPVTKAIPVT-RPVPVTKPVTVSRPMP 247
>AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
variant protein.
Length = 616
Score = 29.9 bits (64), Expect = 6.5
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E L+ +F G V + DR T + A+ +L+GR GR L
Sbjct: 28 TEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRAL 87
Query: 337 RVQMA 351
RV A
Sbjct: 88 RVDNA 92
>AK056789-1|BAB71285.1| 541|Homo sapiens protein ( Homo sapiens
cDNA FLJ32227 fis, clone PLACE6004396. ).
Length = 541
Score = 29.9 bits (64), Expect = 6.5
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1
Query: 565 ENGSGCDCENGRASSWSRSVSGTATDPG 482
E GC C GRASS +R + A+DPG
Sbjct: 39 ERPRGCPC-TGRASSLARDSAAAASDPG 65
>AB033022-1|BAA86510.1| 851|Homo sapiens KIAA1196 protein protein.
Length = 851
Score = 29.9 bits (64), Expect = 6.5
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +3
Query: 399 TQPFTVSFTSSLQVPFEVAEAFVLAQPQPGSVAVPLTLRLQELARPFSQSQPLP 560
++P T+ + P +++ + +P P + A+P+T R + +P + S+P+P
Sbjct: 154 SKPVTIGKPVGVSKPIGISKPVSVGRPMPVTKAIPVT-RPVPVTKPVTVSRPMP 206
>Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 225
Score = 29.5 bits (63), Expect = 8.6
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E L+ +F G V + DR T + A+ +L+GR GR L
Sbjct: 19 TEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRAL 78
Query: 337 RVQMA 351
RV A
Sbjct: 79 RVDNA 83
>Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 29.5 bits (63), Expect = 8.6
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E L+ +F G V + DR T + A+ +L+GR GR L
Sbjct: 28 TEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRAL 87
Query: 337 RVQMA 351
RV A
Sbjct: 88 RVDNA 92
>Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 29.5 bits (63), Expect = 8.6
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E L+ +F G V + DR T + A+ +L+GR GR L
Sbjct: 28 TEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRAL 87
Query: 337 RVQMA 351
RV A
Sbjct: 88 RVDNA 92
>M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation factor
protein.
Length = 577
Score = 29.5 bits (63), Expect = 8.6
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E L+ +F G V + DR T + A+ +L+GR GR L
Sbjct: 28 TEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRAL 87
Query: 337 RVQMA 351
RV A
Sbjct: 88 RVDNA 92
>BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 29.5 bits (63), Expect = 8.6
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E L+ +F G V + DR T + A+ +L+GR GR L
Sbjct: 28 TEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRAL 87
Query: 337 RVQMA 351
RV A
Sbjct: 88 RVDNA 92
>BC105582-1|AAI05583.1| 173|Homo sapiens RBMX2 protein protein.
Length = 173
Score = 29.5 bits (63), Expect = 8.6
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T D+ VF + GE+ +I + RD+ T +S A+D+ +G + GR +
Sbjct: 48 TEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTI 107
Query: 337 RV 342
RV
Sbjct: 108 RV 109
>BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif protein,
X-linked 2 protein.
Length = 322
Score = 29.5 bits (63), Expect = 8.6
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T D+ VF + GE+ +I + RD+ T +S A+D+ +G + GR +
Sbjct: 48 TEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTI 107
Query: 337 RV 342
RV
Sbjct: 108 RV 109
>BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage
stimulation factor, 3' pre-RNA, subunit 2, 64kD protein.
Length = 559
Score = 29.5 bits (63), Expect = 8.6
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E L+ +F G V + DR T + A+ +L+GR GR L
Sbjct: 27 TEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRAL 86
Query: 337 RVQMA 351
RV A
Sbjct: 87 RVDNA 91
>BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 29.5 bits (63), Expect = 8.6
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E L+ +F G V + DR T + A+ +L+GR GR L
Sbjct: 28 TEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRAL 87
Query: 337 RVQMA 351
RV A
Sbjct: 88 RVDNA 92
>BC003676-1|AAH03676.1| 163|Homo sapiens Unknown (protein for
IMAGE:3686686) protein.
Length = 163
Score = 29.5 bits (63), Expect = 8.6
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T D+ VF + GE+ +I + RD+ T +S A+D+ +G + GR +
Sbjct: 48 TEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTI 107
Query: 337 RV 342
RV
Sbjct: 108 RV 109
>AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein
protein.
Length = 322
Score = 29.5 bits (63), Expect = 8.6
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T D+ VF + GE+ +I + RD+ T +S A+D+ +G + GR +
Sbjct: 48 TEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTI 107
Query: 337 RV 342
RV
Sbjct: 108 RV 109
>AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif protein,
X-linked 2 protein.
Length = 322
Score = 29.5 bits (63), Expect = 8.6
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T D+ VF + GE+ +I + RD+ T +S A+D+ +G + GR +
Sbjct: 48 TEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTI 107
Query: 337 RV 342
RV
Sbjct: 108 RV 109
>AF151837-1|AAD34074.1| 351|Homo sapiens CGI-79 protein protein.
Length = 351
Score = 29.5 bits (63), Expect = 8.6
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T D+ VF + GE+ +I + RD+ T +S A+D+ +G + GR +
Sbjct: 48 TEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTI 107
Query: 337 RV 342
RV
Sbjct: 108 RV 109
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,552,594
Number of Sequences: 237096
Number of extensions: 1320694
Number of successful extensions: 3687
Number of sequences better than 10.0: 135
Number of HSP's better than 10.0 without gapping: 3444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3674
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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