Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_H17
(568 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 78 4e-15
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 78 4e-15
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 36 0.015
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 32 0.25
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 32 0.33
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 31 0.76
U41535-13|AAB63405.1| 1075|Caenorhabditis elegans Hypothetical p... 30 1.3
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 30 1.3
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 29 1.8
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 29 1.8
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 29 1.8
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 29 2.3
AF067945-8|ABQ13060.1| 255|Caenorhabditis elegans Mechanosensor... 29 2.3
AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensor... 29 2.3
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 29 2.3
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 29 2.3
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 29 2.3
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 29 2.3
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 29 2.3
U23529-4|AAK39164.2| 545|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 28 4.1
U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein. 28 4.1
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 28 4.1
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 28 4.1
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 28 5.4
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 28 5.4
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 28 5.4
AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-relat... 28 5.4
AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-relat... 28 5.4
AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin prote... 28 5.4
AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin prote... 28 5.4
AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin prote... 28 5.4
AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin prote... 28 5.4
AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin prote... 28 5.4
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 28 5.4
AC024746-10|AAF60400.2| 483|Caenorhabditis elegans Hypothetical... 28 5.4
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z36719-2|CAA85317.2| 421|Caenorhabditis elegans Hypothetical pr... 27 9.4
U50312-4|AAA92321.1| 542|Caenorhabditis elegans Temporarily ass... 27 9.4
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 27 9.4
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 27 9.4
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 78.2 bits (184), Expect = 4e-15
Identities = 34/67 (50%), Positives = 46/67 (68%)
Frame = +1
Query: 151 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGR 330
+TTP DLRR FER G++GD++IPRD+Y+R+S E ALD DG+++DGR
Sbjct: 29 QTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGR 88
Query: 331 ELRVQMA 351
ELRV +A
Sbjct: 89 ELRVTLA 95
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 78.2 bits (184), Expect = 4e-15
Identities = 34/67 (50%), Positives = 46/67 (68%)
Frame = +1
Query: 151 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGR 330
+TTP DLRR FER G++GD++IPRD+Y+R+S E ALD DG+++DGR
Sbjct: 29 QTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGR 88
Query: 331 ELRVQMA 351
ELRV +A
Sbjct: 89 ELRVTLA 95
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
TT EDL +F R G++ + I RDR + +S E+A +D ++D R
Sbjct: 252 TTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRR 311
Query: 334 LRVQMA 351
+ V +
Sbjct: 312 IHVDFS 317
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
TT EDL +F R G++ + I RDR + +S E+A +D ++D R
Sbjct: 252 TTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRR 311
Query: 334 LRVQMA 351
+ V +
Sbjct: 312 IHVDFS 317
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
TT EDL +F R G++ + I RDR + +S E+A +D ++D R
Sbjct: 183 TTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRR 242
Query: 334 LRVQMA 351
+ V +
Sbjct: 243 IHVDFS 248
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +1
Query: 151 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGR 330
+TT +DL F + G V ++ I DR T + A+D +G +GR
Sbjct: 14 QTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFNGVDFNGR 73
Query: 331 ELRVQMA 351
LRV +A
Sbjct: 74 ALRVNLA 80
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 36.3 bits (80), Expect = 0.015
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +1
Query: 151 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGR 330
+TT E+L F G++ ++ I DR T + A++ ++G +GR
Sbjct: 15 QTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQMNGAEFNGR 74
Query: 331 ELRVQMA 351
LRV +A
Sbjct: 75 PLRVNLA 81
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 32.3 bits (70), Expect = 0.25
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E++ F G V ++ I DR T + A++ L+G +GR L
Sbjct: 18 TEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLNGVAFNGRNL 77
Query: 337 RVQMA 351
RV A
Sbjct: 78 RVNYA 82
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = +1
Query: 169 LRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQM 348
LR F + GEV + I RD T + E A+D ++G L R +R
Sbjct: 148 LREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNW 207
Query: 349 A 351
A
Sbjct: 208 A 208
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 30.7 bits (66), Expect = 0.76
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
TT +DLR VF GE+ + DR + S A D L LDG +
Sbjct: 87 TTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTDLDGHK 146
Query: 334 LRVQMA 351
+RV +
Sbjct: 147 IRVDFS 152
>U41535-13|AAB63405.1| 1075|Caenorhabditis elegans Hypothetical
protein F18A1.1 protein.
Length = 1075
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Frame = -1
Query: 562 NGSGCDCENGRASSWSRSVSG---TATDPGCGCASTNASAT 449
N SG DCE R S+ R V G AT C C S T
Sbjct: 461 NNSGLDCEERRVSNVLRRVLGRFTVATSRNCECGPGTTSTT 501
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/63 (23%), Positives = 30/63 (47%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
+T E++ F+ CG++ IP+D++T++ E AL ++G + R
Sbjct: 66 STIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-VMNGSLFRSRP 124
Query: 334 LRV 342
+ V
Sbjct: 125 IVV 127
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E++R +F GE+ + RD+ T +S A+ S +G L + +
Sbjct: 54 TQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTI 113
Query: 337 RVQMA 351
+V A
Sbjct: 114 KVSYA 118
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +1
Query: 166 DLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQ 345
DL+ +FE+ G V D+ I + R S E A L G M++GR++ V
Sbjct: 168 DLKTMFEKFGVVSDVEIIFNE--RGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEVN 225
Query: 346 MA 351
A
Sbjct: 226 CA 227
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +1
Query: 166 DLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRELRVQ 345
DL+ +FE+ G V D+ I + R S E A L G M++GR++ V
Sbjct: 168 DLKTMFEKFGVVSDVEIIFNE--RGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEVN 225
Query: 346 MA 351
A
Sbjct: 226 CA 227
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
T +DL+ +F++ GEV ++ + D+ T A +LDG + GR
Sbjct: 290 TKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSALDGYVFKGRM 349
Query: 334 LRV 342
+ +
Sbjct: 350 MHI 352
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -1
Query: 502 GTATDPGCGCASTNASATSNGTWSDDVNETVNGCVCGRICFC 377
GT D CGC S G D+NE NG VCG C
Sbjct: 127 GTCLDGKCGCMK---GFRSLGKVCIDLNECDNGAVCGPNARC 165
>AF067945-8|ABQ13060.1| 255|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform j protein.
Length = 255
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -1
Query: 502 GTATDPGCGCASTNASATSNGTWSDDVNETVNGCVCGRICFC 377
GT D CGC S G D+NE NG VCG C
Sbjct: 168 GTCLDGKCGCMK---GFRSLGKVCIDLNECDNGAVCGPNARC 206
>AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform i protein.
Length = 954
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -1
Query: 502 GTATDPGCGCASTNASATSNGTWSDDVNETVNGCVCGRICFC 377
GT D CGC S G D+NE NG VCG C
Sbjct: 176 GTCLDGKCGCMK---GFRSLGKVCIDLNECDNGAVCGPNARC 214
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -1
Query: 502 GTATDPGCGCASTNASATSNGTWSDDVNETVNGCVCGRICFC 377
GT D CGC S G D+NE NG VCG C
Sbjct: 176 GTCLDGKCGCMK---GFRSLGKVCIDLNECDNGAVCGPNARC 214
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -1
Query: 502 GTATDPGCGCASTNASATSNGTWSDDVNETVNGCVCGRICFC 377
GT D CGC S G D+NE NG VCG C
Sbjct: 176 GTCLDGKCGCMK---GFRSLGKVCIDLNECDNGAVCGPNARC 214
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -1
Query: 502 GTATDPGCGCASTNASATSNGTWSDDVNETVNGCVCGRICFC 377
GT D CGC S G D+NE NG VCG C
Sbjct: 168 GTCLDGKCGCMK---GFRSLGKVCIDLNECDNGAVCGPNARC 206
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -1
Query: 502 GTATDPGCGCASTNASATSNGTWSDDVNETVNGCVCGRICFC 377
GT D CGC S G D+NE NG VCG C
Sbjct: 180 GTCLDGKCGCMK---GFRSLGKVCIDLNECDNGAVCGPNARC 218
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -1
Query: 502 GTATDPGCGCASTNASATSNGTWSDDVNETVNGCVCGRICFC 377
GT D CGC S G D+NE NG VCG C
Sbjct: 180 GTCLDGKCGCMK---GFRSLGKVCIDLNECDNGAVCGPNARC 218
>U23529-4|AAK39164.2| 545|Caenorhabditis elegans Hypothetical
protein C15B12.4 protein.
Length = 545
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = -1
Query: 547 DCENGRASSWSRSVS---GTATDPGCGCASTNASATSNGTWSDDVNETVNGCVCG 392
+ + +A SW + ++ +A+ G G A +N GT SDD N T++G V G
Sbjct: 170 EVQTQQALSWDQLMARLMASASASGLGSAQSNLDL---GTGSDDQNITISGLVSG 221
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -1
Query: 568 NENGSGCDCENGRASSWSRSVSGTATDPGCGCASTNASATSNG 440
N NG G NG A + + + +G G G + N + NG
Sbjct: 836 NGNGGGAGDGNGGAGAGNGNGAGAGNGNGAGAGNGNGAGAGNG 878
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
protein R08B4.1a protein.
Length = 1137
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -1
Query: 568 NENGSGCDCENGRASSWSRSVSGTATDPGCGCASTNASATSNG 440
N NG G NG A + + + +G G G + N + NG
Sbjct: 813 NGNGGGAGDGNGGAGAGNGNGAGAGNGNGAGAGNGNGAGAGNG 855
>U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein.
Length = 790
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -1
Query: 568 NENGSGCDCENGRASSWSRSVSGTATDPGCGCASTNASATSNG 440
N NG G NG A + + + +G G G + N + NG
Sbjct: 466 NGNGGGAGDGNGGAGAGNGNGAGAGNGNGAGAGNGNGAGAGNG 508
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGRE 333
+T E++ F+ CG + IP+D++T++ E AL ++G + R
Sbjct: 72 STIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-VMNGSLFRSRP 130
Query: 334 LRV 342
+ V
Sbjct: 131 IVV 133
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 393 PQTQPFTVSFTSSLQVPFEVAEAFVLAQPQP-GSVAVPLTLRLQELA 530
PQ P T S T+S Q P + EA + P P GS P+ L LA
Sbjct: 11 PQLSPLTTSSTNSAQAPSDQEEARI---PVPVGSQHSPVNAELPSLA 54
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGREL 336
T E++ + F CG V + I DR++ + AL D +L GR++
Sbjct: 90 TAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALAMTDS-LLRGRQI 148
Query: 337 RV 342
+V
Sbjct: 149 KV 150
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +1
Query: 286 EEALDSLDGRMLDGRELRVQMA 351
E A +++DGR++ GR++RV+ A
Sbjct: 164 ESAKEAIDGRIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +1
Query: 286 EEALDSLDGRMLDGRELRVQMA 351
E A +++DGR++ GR++RV+ A
Sbjct: 164 ESAKEAIDGRIIHGRQVRVRFA 185
>AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-related
protein protein.
Length = 679
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 355 NAPSVLGAPYRLTSAHQVSP 296
N PS G P +++S HQ SP
Sbjct: 459 NVPSASGTPVKISSVHQFSP 478
>AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-related
protein protein.
Length = 732
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 355 NAPSVLGAPYRLTSAHQVSP 296
N PS G P +++S HQ SP
Sbjct: 459 NVPSASGTPVKISSVHQFSP 478
>AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin protein
1, isoform e protein.
Length = 718
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 355 NAPSVLGAPYRLTSAHQVSP 296
N PS G P +++S HQ SP
Sbjct: 459 NVPSASGTPVKISSVHQFSP 478
>AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin protein
1, isoform b protein.
Length = 732
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 355 NAPSVLGAPYRLTSAHQVSP 296
N PS G P +++S HQ SP
Sbjct: 459 NVPSASGTPVKISSVHQFSP 478
>AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin protein
1, isoform c protein.
Length = 702
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 355 NAPSVLGAPYRLTSAHQVSP 296
N PS G P +++S HQ SP
Sbjct: 459 NVPSASGTPVKISSVHQFSP 478
>AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin protein
1, isoform d protein.
Length = 682
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 355 NAPSVLGAPYRLTSAHQVSP 296
N PS G P +++S HQ SP
Sbjct: 459 NVPSASGTPVKISSVHQFSP 478
>AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin protein
1, isoform a protein.
Length = 679
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 355 NAPSVLGAPYRLTSAHQVSP 296
N PS G P +++S HQ SP
Sbjct: 459 NVPSASGTPVKISSVHQFSP 478
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = +1
Query: 151 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSLDGRMLDGR 330
++T ++ F CG+V + IP+D++T + AL L G M R
Sbjct: 56 KSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLAL-VLSGTMFRNR 114
Query: 331 ELRVQM 348
++ V +
Sbjct: 115 KIMVTL 120
>AC024746-10|AAF60400.2| 483|Caenorhabditis elegans Hypothetical
protein Y110A2AL.2 protein.
Length = 483
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = -1
Query: 541 ENGRASSWSRSVSGTATDPGCGCASTNASATSNGTWSDDVNETVNGCVCGRICF 380
E R + + G++++ C + TS WSDDV N C R F
Sbjct: 255 EGNRCCAKRDVIDGSSSNRTQTCRGPTTAPTSGRCWSDDVMVEGNRCCAKRDVF 308
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 163 EDLRRVFERCGEVGDIYIPRDRYT 234
+DLR +FE+ G++ + I +D+YT
Sbjct: 43 KDLRHLFEQFGKIYEFTILKDKYT 66
>Z36719-2|CAA85317.2| 421|Caenorhabditis elegans Hypothetical
protein C06C3.4 protein.
Length = 421
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 252 KTSTFS-CVTISGYVDITDLSASFKYATEIFRSRPNKLNGPLLVK 121
K+ FS ++IS D+ +S S EI R NK+ GP+L+K
Sbjct: 224 KSCNFSDFISISRKTDLPSVSMS-ALPVEIIALRINKIGGPILMK 267
>U50312-4|AAA92321.1| 542|Caenorhabditis elegans Temporarily
assigned gene nameprotein 38 protein.
Length = 542
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 368 HHPTEADTTADAAVHGL 418
H P+E+D T++AA++GL
Sbjct: 500 HKPSESDKTSEAAIYGL 516
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 163 EDLRRVFERCGEVGDIYIPRDRYT 234
+DLR +FE+ G++ + I +D+YT
Sbjct: 43 KDLRHLFEQFGKIYEFTILKDKYT 66
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/61 (31%), Positives = 22/61 (36%), Gaps = 6/61 (9%)
Frame = -1
Query: 493 TDPGCGCASTNASATSNGTWSDDVNETVNGCVC-----GRIC-FCRVMRVCHNAPSVLGA 332
T P C NA NG +ET C C G+ C F + R C A L
Sbjct: 477 TQPLSSCEKANAYMCQNGAGCKKESETEFTCFCKEGYIGKFCQFTTIPRSCAEAYDFLKL 536
Query: 331 P 329
P
Sbjct: 537 P 537
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,091,282
Number of Sequences: 27780
Number of extensions: 199787
Number of successful extensions: 742
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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