Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_H11
(701 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 44 1e-04
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 44 1e-04
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 44 1e-04
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 44 1e-04
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 44 1e-04
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 44 1e-04
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 44 1e-04
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 44 1e-04
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 43 2e-04
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 43 2e-04
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 42 6e-04
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 42 6e-04
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 39 0.003
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 39 0.003
AF024503-9|AAG24084.1| 327|Caenorhabditis elegans Serpentine re... 31 0.60
U21308-9|AAW57822.1| 787|Caenorhabditis elegans Nfi (nuclear fa... 30 1.4
U21308-8|AAN60509.2| 807|Caenorhabditis elegans Nfi (nuclear fa... 30 1.4
U21308-7|AAW57823.1| 823|Caenorhabditis elegans Nfi (nuclear fa... 30 1.4
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 552 TATAINDFVRLATHEAIDEIVTPSDLDGVLL-VLINALYFKGNWRVKFPYE 701
+A AIN+FV T I +I+ P + L+ VL NA YFK NW+ KF E
Sbjct: 134 SAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANWQTKFKKE 184
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 552 TATAINDFVRLATHEAIDEIVTPSDLDGVLL-VLINALYFKGNWRVKFPYE 701
+A AIN+FV T I +I+ P + L+ VL NA YFK NW+ KF E
Sbjct: 134 SAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANWQTKFKKE 184
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +3
Query: 552 TATAINDFVRLATHEAIDEIVTPSDLDGVLL-VLINALYFKGNWRVKF 692
TA AIN+FVR T + I +I+ ++ L+ VL NALYFK +W+ KF
Sbjct: 125 TAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKF 172
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +3
Query: 552 TATAINDFVRLATHEAIDEIVTPSDLDGVLL-VLINALYFKGNWRVKF 692
TA AIN+FVR T + I +I+ ++ L+ VL NALYFK +W+ KF
Sbjct: 125 TAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKF 172
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +3
Query: 552 TATAINDFVRLATHEAIDEIVTPSDLDGVLL-VLINALYFKGNWRVKF 692
TA AIN+FVR T + I +I+ ++ L+ VL NALYFK +W+ KF
Sbjct: 125 TAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKF 172
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +3
Query: 552 TATAINDFVRLATHEAIDEIVTPSDLDGVLL-VLINALYFKGNWRVKF 692
TA AIN+FVR T + I +I+ ++ L+ VL NALYFK +W+ KF
Sbjct: 125 TAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKF 172
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +3
Query: 552 TATAINDFVRLATHEAIDEIVTPSDLDGVLL-VLINALYFKGNWRVKF 692
TA AIN+FVR T + I +I+ ++ L+ VL NALYFK +W+ KF
Sbjct: 125 TAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKF 172
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +3
Query: 552 TATAINDFVRLATHEAIDEIVTPSDLDGVLL-VLINALYFKGNWRVKF 692
TA AIN+FVR T + I +I+ ++ L+ VL NALYFK +W+ KF
Sbjct: 125 TAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKF 172
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/46 (39%), Positives = 30/46 (65%)
Frame = +3
Query: 555 ATAINDFVRLATHEAIDEIVTPSDLDGVLLVLINALYFKGNWRVKF 692
A +N F+ +T I +++ P +L V +LINA++F+G+WR KF
Sbjct: 132 AKIMNQFISESTKGKIPDMIKPDNLKDVDAILINAIFFQGDWRRKF 177
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/46 (39%), Positives = 30/46 (65%)
Frame = +3
Query: 555 ATAINDFVRLATHEAIDEIVTPSDLDGVLLVLINALYFKGNWRVKF 692
A +N F+ +T I +++ P +L V +LINA++F+G+WR KF
Sbjct: 132 AKIMNQFISESTKGKIPDMIKPDNLKDVDAILINAIFFQGDWRRKF 177
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +3
Query: 531 LGTITRLTATAINDFVRLATHEAIDEIVTPSDLDGVLLVLINALYFKGNWRVKF 692
L T IN FV AT+ I I T + + +LIN++YFK +W KF
Sbjct: 116 LDLTTPAAVQEINSFVNTATNGKIKNIATQDSIKDAIALLINSIYFKADWDDKF 169
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +3
Query: 531 LGTITRLTATAINDFVRLATHEAIDEIVTPSDLDGVLLVLINALYFKGNWRVKF 692
L T IN FV AT+ I I T + + +LIN++YFK +W KF
Sbjct: 116 LDLTTPAAVQEINSFVNTATNGKIKNIATQDSIKDAIALLINSIYFKADWDDKF 169
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +3
Query: 543 TRLTATAINDFVRLATHEAIDEIVTPSDLDGVLLVLINALYFKGNWRVKFPYE 701
T A +N FV T+ I +++ + L+NA+YFK +W+ KF E
Sbjct: 118 TEQAAKTMNTFVENHTNGKIKDLIPADSANNAFAFLVNAMYFKADWQSKFAKE 170
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +3
Query: 543 TRLTATAINDFVRLATHEAIDEIVTPSDLDGVLLVLINALYFKGNWRVKFPYE 701
T A +N FV T+ I +++ + L+NA+YFK +W+ KF E
Sbjct: 118 TEQAAKTMNTFVENHTNGKIKDLIPADSANNAFAFLVNAMYFKADWQSKFAKE 170
>AF024503-9|AAG24084.1| 327|Caenorhabditis elegans Serpentine
receptor, class h protein266 protein.
Length = 327
Score = 31.5 bits (68), Expect = 0.60
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = -3
Query: 432 FKTPPSFSPISFKILKYFLLKHECGWSLNTTLISFRVSSVAPNDSADIIVHADSP-DVTK 256
F+TP + + + ++ + C W L I + + I+ + D P D+
Sbjct: 31 FQTPKTMGSVKYVMMNFHAWCILCDWMLAVMTIPYLLFPAMVGFPLGILKYFDVPIDIQV 90
Query: 255 WLSVFRLTRVTSSSVKLYNDLFKNV*AQKS 166
+L +T V SS V ++ + + + AQK+
Sbjct: 91 YLVAVGITAVYSSIVLIFENRYYMMFAQKT 120
>U21308-9|AAW57822.1| 787|Caenorhabditis elegans Nfi (nuclear
factor i) family protein1, isoform b protein.
Length = 787
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 206 NFTDELVTRVNRKTESHFVTSGLSAWTIISALSLGATDETLNEINVVL-RLHPHSCFNRK 382
N D V V+ + H + A I++ALS T ++ E V R+HPH+ + +
Sbjct: 446 NHGDVGVVVVDERNREHVI----HAQHIVNALSSLRTTPSMRESPVGRKRMHPHTSNSFE 501
Query: 383 YFNILKEIGENDGGV 427
+ N +E+ +N+G +
Sbjct: 502 FLNCNQEMNKNEGAL 516
>U21308-8|AAN60509.2| 807|Caenorhabditis elegans Nfi (nuclear
factor i) family protein1, isoform a protein.
Length = 807
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 206 NFTDELVTRVNRKTESHFVTSGLSAWTIISALSLGATDETLNEINVVL-RLHPHSCFNRK 382
N D V V+ + H + A I++ALS T ++ E V R+HPH+ + +
Sbjct: 466 NHGDVGVVVVDERNREHVI----HAQHIVNALSSLRTTPSMRESPVGRKRMHPHTSNSFE 521
Query: 383 YFNILKEIGENDGGV 427
+ N +E+ +N+G +
Sbjct: 522 FLNCNQEMNKNEGAL 536
>U21308-7|AAW57823.1| 823|Caenorhabditis elegans Nfi (nuclear
factor i) family protein1, isoform c protein.
Length = 823
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 206 NFTDELVTRVNRKTESHFVTSGLSAWTIISALSLGATDETLNEINVVL-RLHPHSCFNRK 382
N D V V+ + H + A I++ALS T ++ E V R+HPH+ + +
Sbjct: 482 NHGDVGVVVVDERNREHVI----HAQHIVNALSSLRTTPSMRESPVGRKRMHPHTSNSFE 537
Query: 383 YFNILKEIGENDGGV 427
+ N +E+ +N+G +
Sbjct: 538 FLNCNQEMNKNEGAL 552
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,352,062
Number of Sequences: 27780
Number of extensions: 299394
Number of successful extensions: 724
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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