Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_H09
         (172 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   1.4  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   1.4  
AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            21   1.4  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    21   1.4  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    20   3.2  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    20   3.2  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    20   3.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   3.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    20   3.2  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       19   4.4  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               19   5.5  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         19   7.3  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    19   7.3  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    19   7.3  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    18   9.7  

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -2

Query: 168 DLEPANEFVV 139
           +L+PANEF+V
Sbjct: 95  NLDPANEFIV 104


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -2

Query: 168 DLEPANEFVV 139
           +L+PANEF+V
Sbjct: 111 NLDPANEFIV 120


>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 82  PKVLSLSSRQEFVHHQVYQYHK 147
           P++  L    E  HH+ +Q H+
Sbjct: 52  PEITWLKDGIELYHHKFFQVHE 73


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
 Frame = +2

Query: 11  LLCQIYLFDTCTMLAD*YIG--SYCFQKFYLCHQDK 112
           LL  ++LFD C+       G  SYC      CH+ K
Sbjct: 12  LLAIVFLFDKCSGYPSIRQGTTSYCLGCGDSCHKCK 47


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 62  ISQQALYRYQINR 24
           + QQ L RY++NR
Sbjct: 279 LHQQLLARYELNR 291


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 127 GGAQTLVLMTEIKLL 83
           GGA  LVL  EIK L
Sbjct: 285 GGALVLVLYDEIKNL 299


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 127 GGAQTLVLMTEIKLL 83
           GGA  LVL  EIK L
Sbjct: 285 GGALVLVLYDEIKNL 299


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 100 SSRQEFVHHQV 132
           S++Q F HHQ+
Sbjct: 913 SNQQHFPHHQI 923


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 116 NSCLDDRDKTFGSNNSQCISQ 54
           NSCL   +  +  +N+Q  +Q
Sbjct: 377 NSCLGSTETYYSKHNTQQFTQ 397


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 18.6 bits (36), Expect(2) = 4.4
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -3

Query: 170 WTWSRRMSLWY 138
           WT    MSLWY
Sbjct: 273 WTPYYVMSLWY 283



 Score = 18.6 bits (36), Expect(2) = 4.4
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = -3

Query: 122 CTNSCLD 102
           CTNSC++
Sbjct: 306 CTNSCMN 312


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = +3

Query: 129 SLSIPQTHSP 158
           ++S+PQ+H P
Sbjct: 706 AVSVPQSHQP 715


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 8/24 (33%), Positives = 10/24 (41%)
 Frame = -3

Query: 122 CTNSCLDDRDKTFGSNNSQCISQQ 51
           C   CL  R K     N  CI ++
Sbjct: 81  CAIRCLAQRRKGGSCRNGVCICRK 104


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
          dehydrogenase/reductase protein.
          Length = 246

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 33 LIPVQCLLTN 62
          L+P+QC L+N
Sbjct: 58 LVPLQCDLSN 67


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 123 PPSLSIPQTHSPAP 164
           PP+L+ P   +P P
Sbjct: 214 PPTLACPLNPNPQP 227


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = -3

Query: 95  DKTFGSNNSQCISQQALYRYQINRFD 18
           +KT  +NN+   +    Y Y  N ++
Sbjct: 87  NKTIHNNNNYKYNYNNKYNYNNNNYN 112


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,940
Number of Sequences: 438
Number of extensions: 811
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 36
effective length of database: 130,575
effective search space used:  2611500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)