Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_G24
(474 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0011 - 7337618-7338496,7338596-7338991 62 2e-10
01_01_1152 + 9170628-9171899 61 5e-10
01_06_0824 - 32243495-32244319,32244449-32244859 55 3e-08
11_01_0750 - 6315126-6315896,6316371-6316784 54 6e-08
05_06_0044 - 25150322-25151260 54 8e-08
11_02_0012 - 7346282-7347136,7347234-7347593 51 5e-07
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 49 2e-06
04_04_0619 + 26652923-26653267,26653440-26654273 48 5e-06
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 48 5e-06
11_02_0014 - 7352619-7352918,7353173-7353418 46 1e-05
11_01_0767 + 6438648-6438809,6439146-6440000 46 1e-05
11_01_0771 + 6453130-6454488 38 0.004
11_01_0456 + 3522599-3523921,3524005-3524027,3524097-3525265,352... 31 0.36
07_03_1306 - 25643469-25643609,25644008-25644169,25644496-256446... 31 0.63
03_05_0294 + 22855503-22855946,22856346-22856399 31 0.63
01_05_0809 - 25422832-25422919,25423887-25424443 30 1.1
03_01_0633 - 4649267-4649383,4649480-4649641,4649735-4649895,465... 28 3.3
09_06_0195 - 21477817-21478119,21478216-21478366,21478459-214786... 28 4.4
04_04_1286 + 32387687-32387908,32388046-32389494 27 5.8
04_04_0720 - 27543998-27544230,27544339-27544432,27544571-275448... 27 5.8
06_01_0977 + 7585817-7585970,7586057-7586146,7586500-7586702,758... 27 7.7
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 62.5 bits (145), Expect = 2e-10
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Frame = +3
Query: 9 LKLALAILSEAATGPTQAEIASVLGF-ELD--RNIVRRKFERIIKSLKKESSEYVLNFGS 179
L ALA+++ A G T E+ ++LG LD VRR E + V +
Sbjct: 40 LYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADESASGGPRVSD-AC 98
Query: 180 KIYIGQSVEPRQRFAAIAQEFYKTELKSVDFLNT-EVAANEINSWVSNTTQGKIPKLV-D 353
++ +++E + + A A YK ++ +F + + +IN WVS T IP+++ D
Sbjct: 99 GVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWVSKATNKLIPEILPD 158
Query: 354 ADDMIGMVVLIINTLYFKGSWRHQFPPNMTKPGPFY 461
+ ++++N +YFKG W + FP + T G F+
Sbjct: 159 GSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFH 194
>01_01_1152 + 9170628-9171899
Length = 423
Score = 60.9 bits (141), Expect = 5e-10
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
Frame = +3
Query: 18 ALAILSEAATGPTQAEIASVLGFELDRNIVRRKFERIIKSLKKESSEYVLNFGSKIYIGQ 197
ALA++++ A G TQ E+ LG + R R++ L+ + +F +++ +
Sbjct: 71 ALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPNT---SFACGVWVDR 127
Query: 198 SVEPRQRFAAIAQEFYKTELKSVDFLNT-EVAANEINSWVSNTTQGKIPKLVDADDM-IG 371
FA A Y + DF E A +N++VS+ T+G I ++ + +
Sbjct: 128 GRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLIRDVLPPNSVDSS 187
Query: 372 MVVLIINTLYFKGSWRHQFPPNMTKPGPFYV 464
VV++ N ++FKG+W F P+ T PF++
Sbjct: 188 TVVVLANAVHFKGTWSLPFHPSATFHAPFHL 218
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 55.2 bits (127), Expect = 3e-08
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +3
Query: 165 LNFGSKIYIGQSVEPRQRFAAIAQEFYKTELKSVDFLNT-EVAANEINSWVSNTTQGKIP 341
+ F + +++ ++ + +A + + Y+ E + V F + E A EIN W + T G+I
Sbjct: 99 VRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFESATAGRIK 158
Query: 342 KLVDADDMIGMVVLII-NTLYFKGSWRHQFPPNMTKPGPFYV 464
+ D + ++ N LYFKG W +F T FY+
Sbjct: 159 DFLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYL 200
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 54.0 bits (124), Expect = 6e-08
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 10/159 (6%)
Frame = +3
Query: 15 LALAILSEAATGPTQAEIASVLGF-------ELDR-NIVRRKFERIIKSLKKESSEYVLN 170
++LA+ + A G T+ ++ LG D N+ R +R+++ + S L
Sbjct: 43 VSLALAAGGARGATRRQVLQALGCGGGGRGGAADAANVASRVVKRVLRD-RSTSGGPRLA 101
Query: 171 FGSKIYIGQSVEPRQRFAAIAQEFYKTELKSVDFLNT-EVAANEINSWVSNTTQGKIPKL 347
F ++ S F +A Y + K DF N E A ++INSWV ++T+G + L
Sbjct: 102 FAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKDSTKGTVTTL 161
Query: 348 VDADDMIGMVVLII-NTLYFKGSWRHQFPPNMTKPGPFY 461
+ A + L++ + LYF+G W + T FY
Sbjct: 162 LPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFY 200
>05_06_0044 - 25150322-25151260
Length = 312
Score = 53.6 bits (123), Expect = 8e-08
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Frame = +3
Query: 183 IYIGQSVEPRQRFAAIAQEFYKTELKSVDFLNTEVAANEINSWVSNTTQGKIPKL----V 350
+++ S+ FA A +K ++S N A EIN W S+ T G + + +
Sbjct: 3 VWVDASLRLNPAFADTAASVFKAAVRSAG--NPAAARAEINEWFSSQTGGFVKDILSNSI 60
Query: 351 DADD--------MIGMVVLIINTLYFKGSWRHQFPPNMTKPGPFYVSP 470
D DD I V + N+LYF W H F P++T+ G F+VSP
Sbjct: 61 DDDDDGSGGGGGAISASVFLANSLYFNAYWDHPFFPHLTEEGDFHVSP 108
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 50.8 bits (116), Expect = 5e-07
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 2/153 (1%)
Frame = +3
Query: 9 LKLALAILSEAATGPTQAEIASVLGFELDRNIVRRKFERIIKSLKKESSEYVLNFGSKIY 188
L ALA+++ A G T E+ ++LG + + R ++ + SE + G ++
Sbjct: 40 LYAALALVASGARGTTLDELVALLG-AASLDDLEESVRRAVEVGLADESE---SGGPRVS 95
Query: 189 IGQSVEPRQRFAAIAQEFYKTELKSVDFLNTEVAANE-INSWVSNTTQGKIPKLV-DADD 362
V +R A K ++ DF ++ + IN WVS T I +++ D
Sbjct: 96 YACGVWHDERLAL------KPAYRAADFQRQPKSSRKKINKWVSKATNKLIREILPDGSV 149
Query: 363 MIGMVVLIINTLYFKGSWRHQFPPNMTKPGPFY 461
G ++++N +YFKG W + FP T G F+
Sbjct: 150 HGGTALVLVNAIYFKGKWSNPFPRERTTTGKFH 182
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 291 ANEINSWVSNTTQGKIPKLVDADDMIGMVVLII-NTLYFKGSWRHQFPPNMTKPGPFYV 464
A+++NSWV T G I +++ + L++ N LYFKG+W +F + TK G F++
Sbjct: 214 ASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFHL 272
Score = 43.6 bits (98), Expect = 8e-05
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 297 EINSWVSNTTQGKIPKLVDADDMIGMVVLII-NTLYFKGSWRHQFPPNMTKPGPFYV 464
++NSWV T G I + + L++ N LYFKG+W +F + T+ G F++
Sbjct: 468 QVNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFHL 524
Score = 35.1 bits (77), Expect = 0.029
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Frame = +3
Query: 9 LKLALAILSEAATGPTQAEIASVLGFELDRNIVRRKFERIIKSLKKESSEYV---LNFGS 179
L +AL++++ A G T+ ++AS LG + E++++ + ++S + F
Sbjct: 44 LHVALSLVAAGAGGATRDQLASALGGPGSAEGLHAFAEQLVQLVLADASGAGGPRVAFAD 103
Query: 180 KIYIGQSVEPRQRFAAIAQEFYKTELKSVDF 272
+++ S+ ++ F +A YK E SVDF
Sbjct: 104 GVFVDASLSLKKTFGDVAVGKYKAETHSVDF 134
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 47.6 bits (108), Expect = 5e-06
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Frame = +3
Query: 9 LKLALAILSEAATGPTQAEIASVLGFELDRNIVRRKFERIIKSLKKESSEYV-LNFGSKI 185
L+ LA+L+ G T ++ + LG ++I + L E + L+F + I
Sbjct: 29 LRAGLALLATGTDGETLRQLLAFLG---SQHI--HQLNAASAGLLAEMRAWPQLSFAAGI 83
Query: 186 YIGQSVEPRQRFAAIAQEFYKTELKSVDFLN-TEVAANEINSWVSNTTQGKIPKLVDADD 362
++ +S+ R F + A + +SVDF N AA E+N ++S T G++ +
Sbjct: 84 FVDRSLRLRPEFQSTAAAAHGAFPRSVDFQNQANAAAAEVNRFISQATNGRLNNTISPGT 143
Query: 363 MIGMVVLII-NTLYFKGSWRHQFPPNMTKPGPFY 461
++ N ++FK +W +F T+ F+
Sbjct: 144 FGSSTKCVLANAMHFKATWGRKFESYDTQRRRFH 177
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 47.6 bits (108), Expect = 5e-06
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 291 ANEINSWVSNTTQGKIPKLVDADDMIGMVVLII-NTLYFKGSWRHQFPPNMTKPGPF 458
A+++NSWV T G I +++ + L++ N LYFKG+W +F + TK G F
Sbjct: 6 ASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEF 62
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 297 EINSWVSNTTQGKIPKLVDADDMIGMVVLI-INTLYFKGSWRHQFPPNMTKPGPFY 461
+IN WVS T IP+++ + + L+ +N +YFKG W FP T G F+
Sbjct: 89 KINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTGKFH 144
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 46.4 bits (105), Expect = 1e-05
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +3
Query: 174 GSKIYIGQSVEPRQRFAAIAQEFYKTELKSVDFLNTEVAAN-EINSWVSNTTQGKIPKLV 350
GS + S++P R A + YK +VDF N V A EIN+WV+ T+ I +++
Sbjct: 21 GSWLDASYSLKPAYRDAIVGT--YKGAASTVDFKNHPVEARKEINAWVARATKNLITEVI 78
Query: 351 DADDM-IGMVVLIINTLYFKGSWRHQFPPNMTKPGPF 458
+ + ++ N +YFKG W F + T F
Sbjct: 79 KPESQSVDTRHVVGNAIYFKGEWLAPFDKSDTAEREF 115
>11_01_0771 + 6453130-6454488
Length = 452
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 282 EVAANEINSWVSNTTQGKIPKLVDADDMIG--MVVLIINTLYFKGSWRHQFPPNMTKPGP 455
E A +IN+W T GK+ V +G V++ N +YFKG W F + T+ P
Sbjct: 171 EEARKQINAWARRAT-GKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERKP 229
Query: 456 FY 461
FY
Sbjct: 230 FY 231
>11_01_0456 +
3522599-3523921,3524005-3524027,3524097-3525265,
3525373-3525737
Length = 959
Score = 31.5 bits (68), Expect = 0.36
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +3
Query: 315 SNTTQGKIPKLVDADDMIGMVVLIINTLYFKGSWRHQFPPNM 440
+NT QGKIP ++ + + VL++N + G + + FPP++
Sbjct: 131 NNTLQGKIPDFTNSSN---LKVLLLNGNHLIGQFNNNFPPHL 169
>07_03_1306 -
25643469-25643609,25644008-25644169,25644496-25644659,
25645117-25645192,25645569-25645651,25646393-25646669
Length = 300
Score = 30.7 bits (66), Expect = 0.63
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 201 VEPRQRFAAIAQEFYKTELKSVDFLNTEVAANEINSWVSNTTQGK 335
++P+ +AQ++ EL+ +F+ E+ EIN TQGK
Sbjct: 238 IKPKNDIPMLAQKYLDKELELEEFITHEMGFEEINRAFELLTQGK 282
>03_05_0294 + 22855503-22855946,22856346-22856399
Length = 165
Score = 30.7 bits (66), Expect = 0.63
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Frame = +3
Query: 9 LKLALAILSEAATGPTQAEIASVLGFELDRNI--VRRKFERIIKSLKKESSEYV---LNF 173
L +AL++++ A G T+ ++ S+LG + E++++ + +SS + F
Sbjct: 53 LHVALSLVAAGAGGATRDQLVSLLGVPGRGTAEGLHAFAEQVVQLVLADSSPAGGPRVAF 112
Query: 174 GSKIYIGQSVEPRQRFAAIAQEFYKTELKSVDF 272
++I S+ + F +A YK E SVDF
Sbjct: 113 ADGVFIDSSLSLMKSFKDVAVGKYKAETHSVDF 145
>01_05_0809 - 25422832-25422919,25423887-25424443
Length = 214
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +3
Query: 9 LKLALAILSEAATGPTQAEIASVLGFELDRNIVRRKFERIIKSLKKESSEYVLNFGSKIY 188
L+LA +L E + +E V G E DR+I+ + S+KK+ S + N G +
Sbjct: 150 LELATRVLDELVEMCSSSEPLWVRGVETDRDILNYDDDEDALSIKKDVSSNIDNIGESNF 209
Query: 189 I 191
+
Sbjct: 210 L 210
>03_01_0633 -
4649267-4649383,4649480-4649641,4649735-4649895,
4650056-4650080,4650155-4650237,4650332-4650704
Length = 306
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 201 VEPRQRFAAIAQEFYKTELKSVDFLNTEVAANEINSWVSNTTQGK 335
V+P+Q +A ++ EL+ F+ EV +IN+ QGK
Sbjct: 252 VKPKQDIPILADKYLNKELELDKFITHEVPLKDINTAFDLLLQGK 296
>09_06_0195 -
21477817-21478119,21478216-21478366,21478459-21478696,
21478786-21478996,21479162-21479361,21479453-21479545,
21479722-21481093
Length = 855
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = -3
Query: 430 GNW*RQLPLKYRVFIINTTIPIMSSASTNLGIFPCVVFDTQELISFAATSVFKKSTDFNS 251
G W +P + V++ N PI+ + S+N + + +T +L+ A+ +T+ +
Sbjct: 65 GIWYNNIPRRTVVWVANRATPIIVNGSSNSSLPSLAMTNTSDLVLSDASGQIVWTTNLTA 124
Query: 250 V 248
V
Sbjct: 125 V 125
>04_04_1286 + 32387687-32387908,32388046-32389494
Length = 556
Score = 27.5 bits (58), Expect = 5.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 368 WDGCVDYKHPVFQR 409
WD VDY HP+ QR
Sbjct: 539 WDNYVDYSHPLLQR 552
>04_04_0720 -
27543998-27544230,27544339-27544432,27544571-27544898,
27545387-27545850
Length = 372
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 228 IAQEFYKT--ELKSVDFLNTEVAANEINSWVSNTTQGKIPKLVDA 356
+ QEF K+ + K D + A+ + WV TTQ KI + +++
Sbjct: 285 VVQEFRKSFQDAKEADPNGSSSASPGVMKWVMETTQAKIKEFLES 329
>06_01_0977 +
7585817-7585970,7586057-7586146,7586500-7586702,
7587274-7587452,7587913-7587991,7588403-7588537,
7588651-7588800,7588887-7588997,7589084-7590004,
7590351-7590623,7590853-7591062,7591425-7591573,
7591716-7592052
Length = 996
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +3
Query: 33 SEAATGPTQAEIASVLGFELDRNIVRRKFERIIKSLKKESSEYV--LNFGSKI 185
SE A P+ AE+A L E+D ++ R+ + I+ L++E +V L G K+
Sbjct: 419 SEGAFLPSLAEVAISLSTEIDPDVESRR-KSILGELQREELRFVQTLERGEKL 470
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,378,896
Number of Sequences: 37544
Number of extensions: 228846
Number of successful extensions: 578
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 967140324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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