Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_G21
         (365 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.5  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   1.5  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   1.5  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   3.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   3.4  
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            21   3.4  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    21   6.0  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    21   6.0  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2

Query: 178 RDKFSDVTFVEYTFTAILTINLQYLSTLIS 89
           +DK  DV  + YT    ++    YLST ++
Sbjct: 315 KDKPEDVLIIIYTILTYMSGVFYYLSTTVN 344


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 101 RKILKIDCQDGSKCVFDKR 157
           RK L   C++   C+ DKR
Sbjct: 139 RKDLSYACREEKSCIIDKR 157


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 101 RKILKIDCQDGSKCVFDKR 157
           RK L   C++   C+ DKR
Sbjct: 139 RKDLSYACREEKSCIIDKR 157


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -1

Query: 236 FNFPKV*VQAIVHPRKHIMPGQIFGCYVCRIHIY 135
           F  PK+  Q+++  +  + P   FGC   R+  Y
Sbjct: 252 FGRPKMTPQSLLPSQTGLSPYLRFGCLSTRLFYY 285


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -2

Query: 232 IFPKFECKQSFTHASISCRDKFSDVTFVEYTFTAIL 125
           IF      + F   ++ CRD+ +   F+     AIL
Sbjct: 99  IFMGMRTYEDFLSVAVYCRDRLNPNLFIYALSVAIL 134


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 165 ENLSRHDMLAWVNDC 209
           +NL+++ M+ W  DC
Sbjct: 13  KNLNQNQMMIWALDC 27


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 163 PKICPGMICLRG*TIACTQTLGKLKN 240
           P + P  +C++     C   LG L+N
Sbjct: 55  PNVVPKPLCIKICAPGCVCRLGYLRN 80


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 163 PKICPGMICLRG*TIACTQTLGKLKN 240
           P + P  +C++     C   LG L+N
Sbjct: 55  PNVVPKPLCIKICAPGCVCRLGYLRN 80


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,233
Number of Sequences: 438
Number of extensions: 1991
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)