Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_G19
         (474 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   1.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   7.7  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   7.7  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   7.7  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = -3

Query: 436 KHLEYHNRNMNQNKENTSITERKIYAPCELDGTMMSD*LEDFCYYHLTLD 287
           KHL++ N    +  +N S++     +P E             CYYH TL+
Sbjct: 84  KHLDFRNSATAELLKNPSLS-----SPDECARACREGEPPRICYYHFTLE 128


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = -3

Query: 436 KHLEYHNRNMNQNKENTSITERKIYAPCELDGTMMSD*LEDFCYYHLTLD 287
           KHL++ N    +  +N S++     +P E             CYYH TL+
Sbjct: 84  KHLDFRNSATAELLKNPSLS-----SPDECARACREGEPPRICYYHFTLE 128


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +1

Query: 301 GNNRSPQVNPTSWCHPAHRVH 363
           GN+  P +N  ++  P  R H
Sbjct: 91  GNSNFPPINHQNYNEPYQRTH 111


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +1

Query: 301 GNNRSPQVNPTSWCHPAHRVH 363
           GN+  P +N  ++  P  R H
Sbjct: 91  GNSNFPPINHQNYNEPYQRTH 111


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +1

Query: 301 GNNRSPQVNPTSWCHPAHRVH 363
           GN+  P +N  ++  P  R H
Sbjct: 91  GNSNFPPINHQNYNEPYQRTH 111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,786
Number of Sequences: 336
Number of extensions: 2163
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)