Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_G19
(474 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 27 0.14
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 24 0.72
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 24 0.72
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 24 0.72
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 24 0.72
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 24 0.72
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 1.7
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 1.7
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 2.9
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 5.1
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 5.1
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 5.1
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 5.1
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 5.1
AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding pr... 21 8.9
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 26.6 bits (56), Expect = 0.14
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 195 KIICCVSNNQDSS*YFNHQKLYVDKNNYH 281
KII +SNN S Y N+ Y + NNY+
Sbjct: 313 KIISSLSNNYKYSNYNNYNNNYNNYNNYN 341
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.2 bits (50), Expect = 0.72
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 195 KIICCVSNNQDSS*YFNHQKLYVDKNNY 278
KII +SNN S Y N+ + NNY
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYNNNNY 107
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.2 bits (50), Expect = 0.72
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 195 KIICCVSNNQDSS*YFNHQKLYVDKNNY 278
KII +SNN S Y N+ + NNY
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYNNNNY 107
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.2 bits (50), Expect = 0.72
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 195 KIICCVSNNQDSS*YFNHQKLYVDKNNY 278
KII +SNN S Y N+ + NNY
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYNNNNY 107
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.2 bits (50), Expect = 0.72
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 195 KIICCVSNNQDSS*YFNHQKLYVDKNNY 278
KII +SNN S Y N+ + NNY
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYNNNNY 107
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 24.2 bits (50), Expect = 0.72
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 195 KIICCVSNNQDSS*YFNHQKLYVDKNNYHGK 287
KII +SNN + S Y N+ Y NNY+ K
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNY---NNYNKK 107
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 1.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 195 KIICCVSNNQDSS*YFNHQKLYVDKNNYH 281
KII +SNN S Y N+ Y NNY+
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNY--NNNYN 106
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 1.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 195 KIICCVSNNQDSS*YFNHQKLYVDKNNYH 281
KII +SNN S Y N+ Y NNY+
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNY--NNNYN 106
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.2 bits (45), Expect = 2.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 93 PPH*TNHHK*SSNQYTNY 40
PPH +HH+ S Q+ +Y
Sbjct: 349 PPHHHHHHQTQSLQHLHY 366
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.1
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +3
Query: 213 SNNQDSS*YFNHQKLYVDKN 272
+NN +++ Y N++KLY + N
Sbjct: 93 NNNYNNNNYNNYKKLYYNIN 112
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 5.1
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -1
Query: 327 INLRTSVITT*LWI 286
+NL+ ++TT LW+
Sbjct: 68 VNLKNQIMTTNLWV 81
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 5.1
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -1
Query: 327 INLRTSVITT*LWI 286
+NL+ ++TT LW+
Sbjct: 68 VNLKNQIMTTNLWV 81
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 5.1
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -1
Query: 327 INLRTSVITT*LWI 286
+NL+ ++TT LW+
Sbjct: 64 VNLKNQIMTTNLWV 77
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.4 bits (43), Expect = 5.1
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -1
Query: 327 INLRTSVITT*LWIFH 280
+NL+ ++TT +W+ H
Sbjct: 60 LNLKDQILTTNVWLEH 75
>AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding
protein protein.
Length = 132
Score = 20.6 bits (41), Expect = 8.9
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = -3
Query: 409 MNQNKENTSITERKIYAPCELDGTMM 332
+ + E ++ RK+ + C LDG +
Sbjct: 67 LGEEFEEETVDGRKVKSVCTLDGNKL 92
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,050
Number of Sequences: 438
Number of extensions: 2659
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -