Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_G18
         (530 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    21   5.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   5.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   5.9  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    21   7.9  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    21   7.9  

>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 93  ASIINNGVFVRLNKATVNMLRIAEPY 170
           AS+ N G+  RL   T  + RI + Y
Sbjct: 23  ASLENTGISDRLENVTQTISRILDGY 48


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -1

Query: 383 WPQEVTCVLELLTDSKYLMDEILNADDVLFAKSLLD 276
           W + +   L++L   +YL  + L   DV     LLD
Sbjct: 696 WLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLD 731


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -1

Query: 383 WPQEVTCVLELLTDSKYLMDEILNADDVLFAKSLLD 276
           W + +   L++L   +YL  + L   DV     LLD
Sbjct: 734 WLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLD 769


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -1

Query: 371 VTCVLELLTDSKYLMDEILNADDVLFAKSLLDE 273
           +TC +  L ++  L+D+  N D+ +    L D+
Sbjct: 70  ITCYMYCLLEAFSLVDDEANVDEDIMLGLLPDQ 102


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -1

Query: 371 VTCVLELLTDSKYLMDEILNADDVLFAKSLLDE 273
           +TC +  L ++  L+D+  N D+ +    L D+
Sbjct: 70  ITCYMYCLLEAFSLVDDEANVDEDIMLGLLPDQ 102


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,130
Number of Sequences: 438
Number of extensions: 2631
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)