Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_G14
         (555 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   3.6  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   8.4  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   8.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   8.4  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -2

Query: 374 SLQTITM*YEGRCNYPVNAEKITDAR*SFRP 282
           SL+     YE   N P N + ITDA  S  P
Sbjct: 303 SLENTLKYYEVGSNVPFNFKFITDANSSSTP 333


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +2

Query: 143 EHVYAVRIFSTSYCAGNKIGNYLQNILIDI 232
           +HV   R+    Y   NKI       LID+
Sbjct: 382 KHVEVARLIRNYYFESNKIDETTLKHLIDV 411


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 379 WFHFKLSRCDMK 344
           WF F   RC+MK
Sbjct: 154 WFPFDDQRCEMK 165


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +2

Query: 143 EHVYAVRIFSTSYCAGNKIGNYLQNILIDI 232
           +HV   R+    Y   NKI       LID+
Sbjct: 382 KHVEVARLIRNYYFESNKIDETTLKHLIDV 411


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,415
Number of Sequences: 438
Number of extensions: 2034
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)