Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_G13
         (619 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   2.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   3.2  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   7.3  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   7.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   7.3  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 569 DI*FGTDINICNIKLIPCA 513
           D+  GT  ++C +K IPC+
Sbjct: 532 DVIPGTQEHVCGVKGIPCS 550


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/42 (23%), Positives = 16/42 (38%)
 Frame = -2

Query: 486 VKHERTWTVRFFCEGTTRSHNYITNSVQFVISKNLYLNFSTN 361
           +K     T  + C+ +  S N I        + N+Y  F  N
Sbjct: 611 IKQNEEITFDYMCQSSKNSENSIMQRASMKENLNVYPEFQEN 652


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 113 LKYSPLLSDNLGFLDKQ 63
           L YSPLLS  L ++D +
Sbjct: 268 LYYSPLLSHGLYYVDTE 284


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/46 (23%), Positives = 19/46 (41%)
 Frame = +1

Query: 196 YALATVLYKSCDGKFINYLRQYKALYTYYLNPKFLKNGGDEFFVGR 333
           Y+L T +    D KFI     Y+    ++ N + L+        G+
Sbjct: 142 YSLYTAVITRPDTKFIQLPPLYEMCPYFFFNSEVLQKANHALIFGK 187


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/46 (23%), Positives = 19/46 (41%)
 Frame = +1

Query: 196 YALATVLYKSCDGKFINYLRQYKALYTYYLNPKFLKNGGDEFFVGR 333
           Y+L T +    D KFI     Y+    ++ N + L+        G+
Sbjct: 142 YSLYTAVITRPDTKFIQLPPLYEMCPYFFFNSEVLQKANHALIFGK 187


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,311
Number of Sequences: 438
Number of extensions: 3621
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)