SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_G12
         (628 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC007993-1|AAH07993.1|  274|Homo sapiens pyrroline-5-carboxylate...    72   2e-12
AK222685-1|BAD96405.1|  276|Homo sapiens Pyrroline-5-carboxylate...    72   2e-12
AK023914-1|BAB14721.1|  274|Homo sapiens protein ( Homo sapiens ...    72   2e-12
M77836-1|AAA36407.1|  319|Homo sapiens pyrroline-5-carboxylate r...    71   3e-12
CR541769-1|CAG46568.1|  319|Homo sapiens PYCR1 protein.                71   3e-12
BC071842-1|AAH71842.1|  319|Homo sapiens pyrroline-5-carboxylate...    71   3e-12
BC001504-1|AAH01504.1|  319|Homo sapiens pyrroline-5-carboxylate...    71   3e-12
AF218000-1|AAG17242.1|  272|Homo sapiens unknown protein.              71   3e-12
BC020553-1|AAH20553.1|  320|Homo sapiens pyrroline-5-carboxylate...    67   4e-11
BC014868-1|AAH14868.1|  320|Homo sapiens pyrroline-5-carboxylate...    67   4e-11
AL117348-6|CAI21802.1|  320|Homo sapiens pyrroline-5-carboxylate...    67   4e-11
AF087859-1|AAP97169.1|  320|Homo sapiens pyrroline 5-carboxylate...    62   2e-09
AL833857-1|CAD38716.1|  244|Homo sapiens hypothetical protein pr...    48   4e-05
AL117348-7|CAI21803.1|   66|Homo sapiens pyrroline-5-carboxylate...    45   2e-04
AL117348-5|CAI21801.1|  214|Homo sapiens pyrroline-5-carboxylate...    33   1.1  
AL117348-4|CAI21800.1|  185|Homo sapiens pyrroline-5-carboxylate...    33   1.1  
AF151351-1|AAD34611.1|  319|Homo sapiens pyrroline 5-carboxylate...    31   2.5  
BC066121-1|AAH66121.1| 1346|Homo sapiens G protein-coupled recep...    30   5.8  
AY498875-1|AAS21061.1| 1346|Homo sapiens G protein coupled recep...    30   5.8  
AY140958-1|AAN46672.1| 1300|Homo sapiens G-protein coupled recep...    30   5.8  
AL096772-1|CAB61578.1| 1346|Homo sapiens protein ( Human DNA seq...    30   5.8  
AB031421-1|BAD83582.1| 1346|Homo sapiens Ig-Hepta homolog protein.     30   5.8  
AB018301-1|BAA34478.2| 1370|Homo sapiens KIAA0758 protein protein.     30   5.8  

>BC007993-1|AAH07993.1|  274|Homo sapiens pyrroline-5-carboxylate
           reductase-like protein.
          Length = 274

 Score = 71.7 bits (168), Expect = 2e-12
 Identities = 41/128 (32%), Positives = 65/128 (50%)
 Frame = +3

Query: 243 KIGFIGGGRLAFALANGFISAGLAKPDEITASCHPLDVASAEAFKGIGATALFENKXXXX 422
           ++GF+G GR+A A+A G I AG  +   I AS  P D      F+ +G      N+    
Sbjct: 10  RVGFVGAGRMAGAIAQGLIRAGKVEAQHILASA-PTDRNLCH-FQALGCRTTHSNQEVLQ 67

Query: 423 XXXXXXXXXXXXXXXPALKEIKDVPAAKNKLFITVAMGVNTATVEKILPAEARVIRVMPN 602
                            L E+  V   ++ + ++VA GV+ +T+E++LP   RV+RV+PN
Sbjct: 68  SCLLVIFATKPHVLPAVLAEVAPVVTTEH-ILVSVAAGVSLSTLEELLPPNTRVLRVLPN 126

Query: 603 TPALVKEG 626
            P +V+EG
Sbjct: 127 LPCVVQEG 134


>AK222685-1|BAD96405.1|  276|Homo sapiens Pyrroline-5-carboxylate
           reductase-like variant protein.
          Length = 276

 Score = 71.7 bits (168), Expect = 2e-12
 Identities = 41/128 (32%), Positives = 65/128 (50%)
 Frame = +3

Query: 243 KIGFIGGGRLAFALANGFISAGLAKPDEITASCHPLDVASAEAFKGIGATALFENKXXXX 422
           ++GF+G GR+A A+A G I AG  +   I AS  P D      F+ +G      N+    
Sbjct: 22  RVGFVGAGRMAGAIAQGLIRAGKVEAQHILASA-PTDRNLCH-FQALGCRTTHSNQEVLQ 79

Query: 423 XXXXXXXXXXXXXXXPALKEIKDVPAAKNKLFITVAMGVNTATVEKILPAEARVIRVMPN 602
                            L E+  V   ++ + ++VA GV+ +T+E++LP   RV+RV+PN
Sbjct: 80  SCLLVIFATKPHVLPAVLAEVAPVVTTEH-ILVSVAAGVSLSTLEELLPPNTRVLRVLPN 138

Query: 603 TPALVKEG 626
            P +V+EG
Sbjct: 139 LPCVVQEG 146


>AK023914-1|BAB14721.1|  274|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13852 fis, clone THYRO1000934, weakly similar to
           PYRROLINE-5-CARBOXYLATE REDUCTASE (EC 1.5.1.2). ).
          Length = 274

 Score = 71.7 bits (168), Expect = 2e-12
 Identities = 41/128 (32%), Positives = 65/128 (50%)
 Frame = +3

Query: 243 KIGFIGGGRLAFALANGFISAGLAKPDEITASCHPLDVASAEAFKGIGATALFENKXXXX 422
           ++GF+G GR+A A+A G I AG  +   I AS  P D      F+ +G      N+    
Sbjct: 10  RVGFVGAGRMAGAIAQGLIRAGKVEAQHILASA-PTDRNLCH-FQALGCRTTHSNQEVLQ 67

Query: 423 XXXXXXXXXXXXXXXPALKEIKDVPAAKNKLFITVAMGVNTATVEKILPAEARVIRVMPN 602
                            L E+  V   ++ + ++VA GV+ +T+E++LP   RV+RV+PN
Sbjct: 68  SCLLVIFATKPHVLPAVLAEVAPVVTTEH-ILVSVAAGVSLSTLEELLPPNTRVLRVLPN 126

Query: 603 TPALVKEG 626
            P +V+EG
Sbjct: 127 LPCVVQEG 134


>M77836-1|AAA36407.1|  319|Homo sapiens pyrroline-5-carboxylate
           reductase protein.
          Length = 319

 Score = 70.9 bits (166), Expect = 3e-12
 Identities = 46/132 (34%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
 Frame = +3

Query: 240 MKIGFIGGGRLAFALANGFISAGLAKPDEITASCHPLDVASAEAFKGIGATALFENKXXX 419
           M +GFIG G+LAFALA GF +AG+    +I AS   +D+A+  A + +G      NK   
Sbjct: 1   MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETV 60

Query: 420 XXXXXXXXXXXXXXXXPALKEIKDVPAAKNKLFITVAMGVNTATVEKILPA---EARVIR 590
                             L EI         + ++ A GV  +++EK L A     RVIR
Sbjct: 61  QHSDVLFLAVKPHIIPFILDEI-GADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIR 119

Query: 591 VMPNTPALVKEG 626
            M NTP +V+EG
Sbjct: 120 CMTNTPVVVREG 131


>CR541769-1|CAG46568.1|  319|Homo sapiens PYCR1 protein.
          Length = 319

 Score = 70.9 bits (166), Expect = 3e-12
 Identities = 46/132 (34%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
 Frame = +3

Query: 240 MKIGFIGGGRLAFALANGFISAGLAKPDEITASCHPLDVASAEAFKGIGATALFENKXXX 419
           M +GFIG G+LAFALA GF +AG+    +I AS   +D+A+  A + +G      NK   
Sbjct: 1   MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETV 60

Query: 420 XXXXXXXXXXXXXXXXPALKEIKDVPAAKNKLFITVAMGVNTATVEKILPA---EARVIR 590
                             L EI         + ++ A GV  +++EK L A     RVIR
Sbjct: 61  QHSDVLFLAVKPHIIPFILDEI-GADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIR 119

Query: 591 VMPNTPALVKEG 626
            M NTP +V+EG
Sbjct: 120 CMTNTPVVVREG 131


>BC071842-1|AAH71842.1|  319|Homo sapiens pyrroline-5-carboxylate
           reductase 1 protein.
          Length = 319

 Score = 70.9 bits (166), Expect = 3e-12
 Identities = 46/132 (34%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
 Frame = +3

Query: 240 MKIGFIGGGRLAFALANGFISAGLAKPDEITASCHPLDVASAEAFKGIGATALFENKXXX 419
           M +GFIG G+LAFALA GF +AG+    +I AS   +D+A+  A + +G      NK   
Sbjct: 1   MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETV 60

Query: 420 XXXXXXXXXXXXXXXXPALKEIKDVPAAKNKLFITVAMGVNTATVEKILPA---EARVIR 590
                             L EI         + ++ A GV  +++EK L A     RVIR
Sbjct: 61  QHSDVLFLAVKPHIIPFILDEI-GADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIR 119

Query: 591 VMPNTPALVKEG 626
            M NTP +V+EG
Sbjct: 120 CMTNTPVVVREG 131


>BC001504-1|AAH01504.1|  319|Homo sapiens pyrroline-5-carboxylate
           reductase 1 protein.
          Length = 319

 Score = 70.9 bits (166), Expect = 3e-12
 Identities = 46/132 (34%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
 Frame = +3

Query: 240 MKIGFIGGGRLAFALANGFISAGLAKPDEITASCHPLDVASAEAFKGIGATALFENKXXX 419
           M +GFIG G+LAFALA GF +AG+    +I AS   +D+A+  A + +G      NK   
Sbjct: 1   MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETV 60

Query: 420 XXXXXXXXXXXXXXXXPALKEIKDVPAAKNKLFITVAMGVNTATVEKILPA---EARVIR 590
                             L EI         + ++ A GV  +++EK L A     RVIR
Sbjct: 61  QHSDVLFLAVKPHIIPFILDEI-GADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIR 119

Query: 591 VMPNTPALVKEG 626
            M NTP +V+EG
Sbjct: 120 CMTNTPVVVREG 131


>AF218000-1|AAG17242.1|  272|Homo sapiens unknown protein.
          Length = 272

 Score = 70.9 bits (166), Expect = 3e-12
 Identities = 46/132 (34%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
 Frame = +3

Query: 240 MKIGFIGGGRLAFALANGFISAGLAKPDEITASCHPLDVASAEAFKGIGATALFENKXXX 419
           M +GFIG G+LAFALA GF +AG+    +I AS   +D+A+  A + +G      NK   
Sbjct: 1   MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETV 60

Query: 420 XXXXXXXXXXXXXXXXPALKEIKDVPAAKNKLFITVAMGVNTATVEKILPA---EARVIR 590
                             L EI         + ++ A GV  +++EK L A     RVIR
Sbjct: 61  QHSDVLFLAVKPHIIPFILDEI-GADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIR 119

Query: 591 VMPNTPALVKEG 626
            M NTP +V+EG
Sbjct: 120 CMTNTPVVVREG 131


>BC020553-1|AAH20553.1|  320|Homo sapiens pyrroline-5-carboxylate
           reductase family, member 2 protein.
          Length = 320

 Score = 67.3 bits (157), Expect = 4e-11
 Identities = 46/133 (34%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
 Frame = +3

Query: 240 MKIGFIGGGRLAFALANGFISAGLAKPDEITASCHPLDVASAEAFKGIGATALFENKXXX 419
           M +GFIG G+LA+ALA GF +AG+    +I AS   +++ +  A + +G      NK   
Sbjct: 1   MSVGFIGAGQLAYALARGFTAAGILSAHKIIASSPEMNLPTVSALRKMGVNLTRSNKETV 60

Query: 420 XXXXXXXXXXXXXXXXPALKEI-KDVPAAKNKLFITVAMGVNTATVEKILPA---EARVI 587
                             L EI  DV A    + ++ A GV  ++VEK L A     +VI
Sbjct: 61  KHSDVLFLAVKPHIIPFILDEIGADVQA--RHIVVSCAAGVTISSVEKKLMAFQPAPKVI 118

Query: 588 RVMPNTPALVKEG 626
           R M NTP +V+EG
Sbjct: 119 RCMTNTPVVVQEG 131


>BC014868-1|AAH14868.1|  320|Homo sapiens pyrroline-5-carboxylate
           reductase family, member 2 protein.
          Length = 320

 Score = 67.3 bits (157), Expect = 4e-11
 Identities = 46/133 (34%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
 Frame = +3

Query: 240 MKIGFIGGGRLAFALANGFISAGLAKPDEITASCHPLDVASAEAFKGIGATALFENKXXX 419
           M +GFIG G+LA+ALA GF +AG+    +I AS   +++ +  A + +G      NK   
Sbjct: 1   MSVGFIGAGQLAYALARGFTAAGILSAHKIIASSPEMNLPTVSALRKMGVNLTRSNKETV 60

Query: 420 XXXXXXXXXXXXXXXXPALKEI-KDVPAAKNKLFITVAMGVNTATVEKILPA---EARVI 587
                             L EI  DV A    + ++ A GV  ++VEK L A     +VI
Sbjct: 61  KHSDVLFLAVKPHIIPFILDEIGADVQA--RHIVVSCAAGVTISSVEKKLMAFQPAPKVI 118

Query: 588 RVMPNTPALVKEG 626
           R M NTP +V+EG
Sbjct: 119 RCMTNTPVVVQEG 131


>AL117348-6|CAI21802.1|  320|Homo sapiens pyrroline-5-carboxylate
           reductase family, member 2 protein.
          Length = 320

 Score = 67.3 bits (157), Expect = 4e-11
 Identities = 46/133 (34%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
 Frame = +3

Query: 240 MKIGFIGGGRLAFALANGFISAGLAKPDEITASCHPLDVASAEAFKGIGATALFENKXXX 419
           M +GFIG G+LA+ALA GF +AG+    +I AS   +++ +  A + +G      NK   
Sbjct: 1   MSVGFIGAGQLAYALARGFTAAGILSAHKIIASSPEMNLPTVSALRKMGVNLTRSNKETV 60

Query: 420 XXXXXXXXXXXXXXXXPALKEI-KDVPAAKNKLFITVAMGVNTATVEKILPA---EARVI 587
                             L EI  DV A    + ++ A GV  ++VEK L A     +VI
Sbjct: 61  KHSDVLFLAVKPHIIPFILDEIGADVQA--RHIVVSCAAGVTISSVEKKLMAFQPAPKVI 118

Query: 588 RVMPNTPALVKEG 626
           R M NTP +V+EG
Sbjct: 119 RCMTNTPVVVQEG 131


>AF087859-1|AAP97169.1|  320|Homo sapiens pyrroline 5-carboxylate
           reductase protein.
          Length = 320

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
 Frame = +3

Query: 240 MKIGFIGGGRLAFALANGFISAGLAKPDEITASCHPLDVASAEAFKGIGATALFENKXXX 419
           M +GFIG G+LA ALA GF +A      +I AS   +++ +  A + +G      NK   
Sbjct: 1   MSVGFIGAGQLANALARGFTAAAFLSAHKIIASSPEMNLPTVSALRKMGVNLTRSNKETV 60

Query: 420 XXXXXXXXXXXXXXXXPALKEI-KDVPAAKNKLFITVAMGVNTATVEKILPA---EARVI 587
                             L EI  DV A    + ++ A GV  ++VEK L A     +VI
Sbjct: 61  KHSDVLFLAVKHIIIPFILDEIGADVQA--RHIVVSCAAGVTISSVEKKLMAFQPAPKVI 118

Query: 588 RVMPNTPALVKEG 626
           R M NTP +V+EG
Sbjct: 119 RCMTNTPVVVQEG 131


>AL833857-1|CAD38716.1|  244|Homo sapiens hypothetical protein
           protein.
          Length = 244

 Score = 47.6 bits (108), Expect = 4e-05
 Identities = 21/51 (41%), Positives = 36/51 (70%)
 Frame = +3

Query: 474 LKEIKDVPAAKNKLFITVAMGVNTATVEKILPAEARVIRVMPNTPALVKEG 626
           L E+  V   ++ + ++VA GV+ +T+E++LP   RV+RV+PN P +V+EG
Sbjct: 55  LAEVAPVVTTEH-ILVSVAAGVSLSTLEELLPPNTRVLRVLPNLPCVVQEG 104


>AL117348-7|CAI21803.1|   66|Homo sapiens pyrroline-5-carboxylate
           reductase family, member 2 protein.
          Length = 66

 Score = 45.2 bits (102), Expect = 2e-04
 Identities = 21/50 (42%), Positives = 32/50 (64%)
 Frame = +3

Query: 240 MKIGFIGGGRLAFALANGFISAGLAKPDEITASCHPLDVASAEAFKGIGA 389
           M +GFIG G+LA+ALA GF +AG+    +I AS   +++ +  A +  GA
Sbjct: 1   MSVGFIGAGQLAYALARGFTAAGILSAHKIIASSPEMNLPTVSALRVGGA 50


>AL117348-5|CAI21801.1|  214|Homo sapiens pyrroline-5-carboxylate
           reductase family, member 2 protein.
          Length = 214

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
 Frame = +3

Query: 513 LFITVAMGVNTATVEKILPA---EARVIRVMPNTPALVKEG 626
           + ++ A GV  ++VEK L A     +VIR M NTP +V+EG
Sbjct: 44  IVVSCAAGVTISSVEKKLMAFQPAPKVIRCMTNTPVVVQEG 84


>AL117348-4|CAI21800.1|  185|Homo sapiens pyrroline-5-carboxylate
           reductase family, member 2 protein.
          Length = 185

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
 Frame = +3

Query: 513 LFITVAMGVNTATVEKILPA---EARVIRVMPNTPALVKEG 626
           + ++ A GV  ++VEK L A     +VIR M NTP +V+EG
Sbjct: 44  IVVSCAAGVTISSVEKKLMAFQPAPKVIRCMTNTPVVVQEG 84


>AF151351-1|AAD34611.1|  319|Homo sapiens pyrroline 5-carboxylate
           reductase isoform protein.
          Length = 319

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
 Frame = +3

Query: 513 LFITVAMGVNTATVEKIL----PAEARVIRVMPNTPALVKEG 626
           + ++ A GV  ++VEK L    PA  +VIR M NTP +V+EG
Sbjct: 90  IVVSCAAGVTISSVEKKLMEFQPAP-KVIRCMTNTPVVVQEG 130


>BC066121-1|AAH66121.1| 1346|Homo sapiens G protein-coupled receptor
           116 protein.
          Length = 1346

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 224 IAD*SNEDRIYWRW*TGIRIGQRIHFSR 307
           I+D SN D +YW    GI+I QR + +R
Sbjct: 493 ISDVSNYDEVYWNTSAGIKIYQRFYTTR 520


>AY498875-1|AAS21061.1| 1346|Homo sapiens G protein coupled receptor
           116 protein.
          Length = 1346

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 224 IAD*SNEDRIYWRW*TGIRIGQRIHFSR 307
           I+D SN D +YW    GI+I QR + +R
Sbjct: 493 ISDVSNYDEVYWNTSAGIKIYQRFYTTR 520


>AY140958-1|AAN46672.1| 1300|Homo sapiens G-protein coupled receptor
           GPR116 protein.
          Length = 1300

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 224 IAD*SNEDRIYWRW*TGIRIGQRIHFSR 307
           I+D SN D +YW    GI+I QR + +R
Sbjct: 492 ISDVSNYDEVYWNTSAGIKIYQRFYTTR 519


>AL096772-1|CAB61578.1| 1346|Homo sapiens protein ( Human DNA
           sequence from clone RP3-365O12 on chromosome 6p11.2-12.3
            Contains the gene for a novel protein similar to
           KIAA0758 and two  ).
          Length = 1346

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 224 IAD*SNEDRIYWRW*TGIRIGQRIHFSR 307
           I+D SN D +YW    GI+I QR + +R
Sbjct: 493 ISDVSNYDEVYWNTSAGIKIYQRFYTTR 520


>AB031421-1|BAD83582.1| 1346|Homo sapiens Ig-Hepta homolog protein.
          Length = 1346

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 224 IAD*SNEDRIYWRW*TGIRIGQRIHFSR 307
           I+D SN D +YW    GI+I QR + +R
Sbjct: 493 ISDVSNYDEVYWNTSAGIKIYQRFYTTR 520


>AB018301-1|BAA34478.2| 1370|Homo sapiens KIAA0758 protein protein.
          Length = 1370

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 224 IAD*SNEDRIYWRW*TGIRIGQRIHFSR 307
           I+D SN D +YW    GI+I QR + +R
Sbjct: 517 ISDVSNYDEVYWNTSAGIKIYQRFYTTR 544


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,820,179
Number of Sequences: 237096
Number of extensions: 1509545
Number of successful extensions: 2583
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2567
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -