Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_G05
         (508 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060845-1|AAL28393.1|  186|Drosophila melanogaster GM02242p pro...   285   2e-77
AE014298-945|AAN09183.1|  186|Drosophila melanogaster CG3203-PD,...   285   2e-77
AE014298-944|AAF46194.1|  186|Drosophila melanogaster CG3203-PC,...   285   2e-77
AE014298-943|AAN09182.1|  186|Drosophila melanogaster CG3203-PB,...   285   2e-77
AE014298-942|AAF46195.1|  186|Drosophila melanogaster CG3203-PA,...   285   2e-77
AF521598-1|AAN62854.1|  400|Drosophila melanogaster MSP-300/nesp...    28   6.3  
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P...    28   6.3  

>AY060845-1|AAL28393.1|  186|Drosophila melanogaster GM02242p
           protein.
          Length = 186

 Score =  285 bits (700), Expect = 2e-77
 Identities = 129/159 (81%), Positives = 145/159 (91%)
 Frame = +2

Query: 32  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPF 211
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 212 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVN 391
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD KGLD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 392 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 508
           RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E+ V++
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEELVSK 159


>AE014298-945|AAN09183.1|  186|Drosophila melanogaster CG3203-PD,
           isoform D protein.
          Length = 186

 Score =  285 bits (700), Expect = 2e-77
 Identities = 129/159 (81%), Positives = 145/159 (91%)
 Frame = +2

Query: 32  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPF 211
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 212 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVN 391
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD KGLD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 392 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 508
           RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E+ V++
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEELVSK 159


>AE014298-944|AAF46194.1|  186|Drosophila melanogaster CG3203-PC,
           isoform C protein.
          Length = 186

 Score =  285 bits (700), Expect = 2e-77
 Identities = 129/159 (81%), Positives = 145/159 (91%)
 Frame = +2

Query: 32  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPF 211
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 212 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVN 391
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD KGLD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 392 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 508
           RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E+ V++
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEELVSK 159


>AE014298-943|AAN09182.1|  186|Drosophila melanogaster CG3203-PB,
           isoform B protein.
          Length = 186

 Score =  285 bits (700), Expect = 2e-77
 Identities = 129/159 (81%), Positives = 145/159 (91%)
 Frame = +2

Query: 32  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPF 211
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 212 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVN 391
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD KGLD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 392 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 508
           RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E+ V++
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEELVSK 159


>AE014298-942|AAF46195.1|  186|Drosophila melanogaster CG3203-PA,
           isoform A protein.
          Length = 186

 Score =  285 bits (700), Expect = 2e-77
 Identities = 129/159 (81%), Positives = 145/159 (91%)
 Frame = +2

Query: 32  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPF 211
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 212 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVN 391
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD KGLD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 392 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 508
           RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E+ V++
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEELVSK 159


>AF521598-1|AAN62854.1|  400|Drosophila melanogaster MSP-300/nesprin
           splice variant protein.
          Length = 400

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +2

Query: 89  SNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQA 250
           SNL VH ++  E     +KLP   A   L N T  +  +  RR   G+   A A
Sbjct: 288 SNLEVHERDAIELKNQAKKLPTDPATERLLNDTVDRIDLLLRRTQQGITMIANA 341


>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
            isoform D protein.
          Length = 11707

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +2

Query: 89   SNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQA 250
            SNL VH ++  E     +KLP   A   L N T  +  +  RR   G+   A A
Sbjct: 7749 SNLEVHERDAIELKNQAKKLPTDPATERLLNDTVDRIDLLLRRTQQGITMIANA 7802


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,145,938
Number of Sequences: 53049
Number of extensions: 519985
Number of successful extensions: 1387
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1387
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)