Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_F22
(426 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0840 + 28570642-28570809,28570919-28571025,28571137-285712... 109 9e-25
02_05_0922 - 32742863-32742958,32743081-32743136,32743253-327433... 89 2e-18
12_01_0489 + 3872495-3872538,3872663-3872741,3872835-3872914,387... 79 1e-15
03_06_0267 - 32751431-32751489,32751600-32751645,32751886-327519... 51 4e-07
11_06_0143 + 20589574-20589684,20590256-20590873,20590943-205910... 48 4e-06
02_05_0449 - 29107310-29107377,29107732-29107777,29107860-291079... 44 4e-05
12_01_0671 - 5702051-5702159,5702493-5703216,5703910-5704476,570... 39 0.002
08_01_0139 + 1105857-1107008,1107124-1107328,1107583-1107768,110... 39 0.002
11_02_0042 - 7672565-7672729,7672902-7672977,7673409-7674132,767... 38 0.003
06_01_0400 + 2862684-2862872,2862956-2863170,2863298-2863448,286... 37 0.006
05_06_0166 + 26093618-26095381,26095820-26096039,26096345-260966... 36 0.014
01_05_0631 + 23835120-23836109,23836204-23836674 36 0.014
01_06_0595 - 30485460-30486097,30486721-30487179,30487339-304875... 34 0.055
03_02_0466 - 8690469-8690522,8691008-8691113,8691216-8691457,869... 33 0.073
07_03_0057 + 12872946-12873152,12873371-12873421,12876335-128764... 33 0.096
05_06_0104 - 25603568-25603867,25603965-25604162,25604247-256045... 33 0.096
02_04_0114 + 19879468-19880671,19882007-19882179,19882265-198826... 33 0.096
11_03_0031 - 9094643-9095824,9095945-9096034,9096141-9096216,909... 33 0.13
12_01_0668 - 5682664-5682916,5684542-5684576,5684643-5684693,568... 32 0.17
04_03_0687 + 18713603-18713962,18715318-18715539,18717068-187172... 32 0.17
03_04_0140 + 17638335-17638583,17638843-17639061,17639206-176394... 32 0.17
10_08_1019 - 22299800-22299946,22300040-22300109,22300930-223010... 32 0.22
04_03_0784 - 19610370-19611548,19611830-19611919,19612001-196120... 32 0.22
02_01_0611 - 4567839-4568144,4568280-4569209,4569301-4569566,456... 32 0.22
12_01_0777 - 7095081-7096259,7096636-7096725,7096827-7096902,709... 31 0.29
07_03_1756 - 29239137-29239325,29239741-29240259,29240693-292408... 31 0.29
03_02_0741 - 10857656-10857844,10858315-10858848,10859516-108598... 31 0.39
03_01_0417 - 3197956-3198438,3198550-3200001,3200116-3200277,320... 30 0.68
11_06_0346 - 22549699-22549721,22549857-22549999,22550100-225521... 30 0.90
09_06_0067 - 20645012-20645095,20645365-20645466,20645583-206458... 30 0.90
08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227... 30 0.90
11_06_0342 - 22523610-22524332 29 1.2
09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,991... 29 1.2
09_02_0379 - 8210401-8210567,8210944-8213827 29 1.2
07_01_0629 - 4695778-4696077,4696242-4696406,4696497-4696673,469... 29 1.2
03_02_0445 - 8551912-8552047,8552729-8552896,8553785-8554068,855... 29 1.2
02_04_0067 - 19425019-19425288,19425393-19425647,19425766-194259... 29 1.2
03_06_0678 - 35480711-35484658 29 1.6
02_03_0314 - 17600970-17600974,17601230-17601357,17601832-176019... 29 1.6
02_02_0543 + 11360514-11361350,11361434-11361559,11361648-113619... 29 1.6
01_05_0749 + 24890944-24891146,24891414-24891535,24891633-248917... 29 1.6
01_05_0662 - 24103475-24103735,24103831-24104085,24104280-241044... 29 1.6
01_05_0660 - 24071523-24071780,24071873-24072127,24072209-240723... 29 1.6
01_05_0659 - 24061318-24061575,24061664-24061918,24062001-240621... 29 1.6
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 29 1.6
09_02_0383 - 8259156-8261843 29 2.1
06_03_1497 + 30585074-30586327 29 2.1
04_04_0918 - 29411239-29411373,29412276-29412526,29412772-294130... 29 2.1
09_01_0155 - 2301903-2302151,2302334-2302491,2302651-2302819,230... 28 2.7
06_01_0042 + 410061-410544,411401-411837 28 2.7
04_04_0193 + 23482177-23484963 28 2.7
03_05_0628 - 26245714-26245755,26245854-26245938,26246022-262461... 28 2.7
03_05_0169 + 21474655-21474771,21474879-21474971,21475553-214756... 28 2.7
02_05_0330 - 27996080-27996757,27996836-27997366,27998124-27998303 28 2.7
02_04_0052 + 19271014-19271627,19272055-19272224,19272321-192725... 28 2.7
02_05_0459 + 29217728-29217919,29218095-29218190,29219785-292198... 28 3.6
02_05_0444 - 29073740-29073844,29074417-29074725,29077910-290779... 28 3.6
01_06_0947 + 33238398-33238469,33238721-33238968,33239063-332393... 28 3.6
12_02_1267 - 27448871-27450445 27 4.8
12_01_0833 - 7730761-7731030,7731171-7731425,7731565-7731736,773... 27 4.8
11_06_0348 - 22561589-22563656,22563788-22564602 27 4.8
10_08_0489 + 18269824-18270270,18271659-18271948,18272341-182725... 27 4.8
06_01_0369 + 2651192-2651862,2652103-2652158,2652816-2652874,265... 27 4.8
04_04_1035 + 30283456-30283536,30284823-30285359,30285508-302865... 27 4.8
04_04_0917 - 29404341-29404519,29404610-29404744,29404898-294052... 27 4.8
04_03_0826 + 20103105-20103697,20104222-20104391,20104487-201047... 27 4.8
02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,606... 27 4.8
09_02_0504 - 10013784-10014041,10014558-10014660,10014932-100150... 27 6.3
09_02_0501 - 9955987-9956244,9956329-9956583,9956713-9956884,995... 27 6.3
08_02_1345 - 26286448-26286679,26287483-26288038,26288068-262883... 27 6.3
07_01_0671 + 5036069-5037670 27 6.3
03_02_0901 + 12267042-12267182,12267949-12268095,12268163-122682... 27 6.3
02_01_0055 + 410661-411380,411481-413733,414486-414875,414983-41... 27 6.3
12_02_0289 - 16914975-16916238,16916246-16916484 27 8.3
12_02_0277 + 16682836-16684368 27 8.3
12_02_0275 + 16662206-16663738 27 8.3
11_06_0338 + 22479804-22480651,22480764-22482954 27 8.3
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 27 8.3
10_06_0007 + 9510385-9510535,9510860-9511433,9511553-9511565 27 8.3
07_01_1106 - 10187609-10190041,10190292-10191932 27 8.3
06_03_1259 - 28800954-28802468 27 8.3
06_03_1258 + 28796643-28798169 27 8.3
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 27 8.3
06_01_0511 + 3688788-3688880,3689050-3689166,3689959-3690066,369... 27 8.3
05_07_0306 - 29108860-29109282,29109425-29110441 27 8.3
04_04_0919 - 29422003-29422267,29422411-29422660,29423163-294234... 27 8.3
04_04_0251 + 23930789-23930960,23931065-23931128,23931641-239317... 27 8.3
03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,589... 27 8.3
02_05_1126 - 34284733-34284810,34285151-34285291,34285424-342855... 27 8.3
02_05_0693 - 30977323-30977421,30977783-30977843,30978874-309789... 27 8.3
02_02_0455 + 10445417-10446931,10447370-10447903,10448198-104482... 27 8.3
02_01_0789 - 5919271-5919411,5920105-5920215,5920303-5920401,592... 27 8.3
01_06_0556 + 30207124-30207581,30207692-30207901,30208016-302081... 27 8.3
01_05_0430 + 22078651-22078677,22079269-22079356,22079669-220799... 27 8.3
01_01_0548 - 4033077-4033349,4034007-4034261,4034362-4034533,403... 27 8.3
>04_04_0840 +
28570642-28570809,28570919-28571025,28571137-28571238,
28571786-28571981,28572691-28572819,28572869-28572895,
28572896-28573090,28573182-28573292
Length = 344
Score = 109 bits (262), Expect = 9e-25
Identities = 47/78 (60%), Positives = 62/78 (79%)
Frame = +1
Query: 193 NLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALL 372
++PW+EKYRP D+ GN D V+RL A++GN PN+I++GPPG GKTT+IL LA LL
Sbjct: 16 DIPWVEKYRPTRVADVGGNSDAVARLQDIARDGNMPNLILSGPPGTGKTTSILSLAHELL 75
Query: 373 GASFKDAVLELNASNDRG 426
G S+++AVLELNAS+DRG
Sbjct: 76 GPSYREAVLELNASDDRG 93
>02_05_0922 -
32742863-32742958,32743081-32743136,32743253-32743382,
32743768-32743849,32744038-32744227,32744290-32744369,
32744769-32744985,32745740-32745923
Length = 344
Score = 88.6 bits (210), Expect = 2e-18
Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 5/107 (4%)
Frame = +1
Query: 121 TIMEVDEAESKPAKPVAG--PSKPTTN---LPWIEKYRPQTFDDIVGNEDTVSRLSVFAK 285
T M++D A P G P T PW+EKYRPQ+ D+ + D V +
Sbjct: 8 TPMDIDAAAPPPGAAAKGKAPLSSTPGGRAAPWVEKYRPQSLGDVAAHRDIVDTIDRLTN 67
Query: 286 NGNAPNIIIAGPPGVGKTTTILCLARALLGASFKDAVLELNASNDRG 426
P++++ GPPG GKT+TIL +AR L G+ + + +LELNAS++RG
Sbjct: 68 ENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERG 114
>12_01_0489 +
3872495-3872538,3872663-3872741,3872835-3872914,
3873888-3874007,3874090-3874159,3874238-3874311,
3874393-3874513,3874600-3874662,3874748-3874807,
3875156-3875281,3875358-3875441,3875912-3876010
Length = 339
Score = 79.0 bits (186), Expect = 1e-15
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +1
Query: 175 PSKPTTNLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILC 354
P P++ PW+EKYRP+ D+ E+ V L+ + + P+++ GPPG GKTTT L
Sbjct: 3 PLVPSSQ-PWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTALA 61
Query: 355 LARALLGAS-FKDAVLELNASNDRG 426
+A L G +K VLELNAS+DRG
Sbjct: 62 IAYQLYGPELYKSRVLELNASDDRG 86
>03_06_0267 -
32751431-32751489,32751600-32751645,32751886-32751960,
32752045-32752114,32752288-32752386,32752505-32752641,
32753040-32753221,32753314-32753482,32753824-32753856,
32753958-32754068,32754184-32754295,32755592-32755727,
32756264-32756291
Length = 418
Score = 50.8 bits (116), Expect = 4e-07
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +1
Query: 202 WIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLGAS 381
W++KYRP+T D + ++ L + P+++ GP G GK T ++ L + + GA
Sbjct: 67 WVDKYRPKTLDKVTVHDQVAQNLKKLVAEQDCPHLLFYGPSGSGKKTLVMALIKQMFGAG 126
Query: 382 FKDAVLE 402
+E
Sbjct: 127 ADKVKME 133
>11_06_0143 +
20589574-20589684,20590256-20590873,20590943-20591010,
20591159-20591234,20591311-20591372,20591452-20591603,
20591889-20592052,20592129-20592317,20592417-20592538,
20592620-20592827,20593238-20593291,20593457-20593626,
20594265-20594355,20595405-20595529,20596372-20596444,
20596822-20596914,20597482-20597728,20598305-20598364,
20598461-20598590,20599008-20599014
Length = 939
Score = 47.6 bits (108), Expect = 4e-06
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 20/98 (20%)
Frame = +1
Query: 193 NLPWIEKYRPQTFDDIVGNEDTVSRLSVF--------------------AKNGNAPNIII 312
+L W EKYRP+ +DIVGN+ V +L + A +G +++
Sbjct: 396 SLQWTEKYRPKVPNDIVGNQSMVKQLHDWLRSWEDQFLHSGQKGKGKKQADSGAKKAVLL 455
Query: 313 AGPPGVGKTTTILCLARALLGASFKDAVLELNASNDRG 426
+GPPG+GKTTT +++ +LG +E+NAS+ RG
Sbjct: 456 SGPPGIGKTTTAKVVSQ-MLGLQ----AIEVNASDSRG 488
>02_05_0449 -
29107310-29107377,29107732-29107777,29107860-29107934,
29108053-29108122,29108313-29108408,29108728-29108914,
29109001-29109169,29109614-29109646,29109731-29109841,
29110070-29111256,29112380-29112448,29114417-29114975,
29115455-29115589,29115714-29115896
Length = 995
Score = 44.4 bits (100), Expect = 4e-05
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +1
Query: 202 WIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLGAS 381
W +KYRP+T + + + +L P+II GPPG GK++ L RA++
Sbjct: 686 WADKYRPRTLGGFTCHREQIEQLKQLVSTEFCPHIIFKGPPGSGKSS----LCRAVVTEI 741
Query: 382 FKDAVLELN 408
F D+ L ++
Sbjct: 742 FGDSSLNVS 750
>12_01_0671 -
5702051-5702159,5702493-5703216,5703910-5704476,
5704654-5704873,5705303-5707207
Length = 1174
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 208 EKYRPQTFDDIVGNEDTVSRLS-VFAKNGNAPNIIIAGPPGVGKTTT 345
+KYRP+ F +IVG LS + AP + GP G GKT+T
Sbjct: 404 QKYRPKLFSEIVGQHIVAQSLSNAITREKIAPAYLFQGPRGTGKTST 450
>08_01_0139 +
1105857-1107008,1107124-1107328,1107583-1107768,
1107924-1108133,1108552-1109186
Length = 795
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 205 IEKYRPQTFDDIVGNEDTVSRLSVFAKNGN-APNIIIAGPPGVGKTTTILCLARAL 369
++KYRP+ F ++ G LS G AP + GP G+GKT+ A +L
Sbjct: 152 LQKYRPKAFSELAGQNVVAQSLSSAVLKGKLAPIYLFHGPHGIGKTSAARIFAASL 207
>11_02_0042 -
7672565-7672729,7672902-7672977,7673409-7674132,
7674684-7674708,7675041-7675486,7676643-7676862,
7677609-7678459,7678697-7679555
Length = 1121
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 208 EKYRPQTFDDIVGNEDTVSRL-SVFAKNGNAPNIIIAGPPGVGKTTTILCLARAL 369
+KYRP++F+++VG V L + + AP + GP G GKT+ + AL
Sbjct: 339 QKYRPRSFNELVGQSFVVQSLNNAIIRERIAPAYLFHGPRGTGKTSAARIFSAAL 393
>06_01_0400 +
2862684-2862872,2862956-2863170,2863298-2863448,
2863566-2863757,2864471-2864633,2864754-2864989,
2865446-2865622,2865707-2865826,2865939-2866241
Length = 581
Score = 37.1 bits (82), Expect = 0.006
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +1
Query: 301 NIIIAGPPGVGKTTTILCLARALLGASFKDAVLELNASNDRG 426
++++ GPPGVGKTT I +AR +L ++ V+ ++ SN+ G
Sbjct: 119 SLLLIGPPGVGKTTVIREIAR-MLADDYRKRVMIVDTSNEIG 159
>05_06_0166 +
26093618-26095381,26095820-26096039,26096345-26096674,
26097481-26098029,26098366-26098426,26099737-26099824,
26100240-26100299
Length = 1023
Score = 35.9 bits (79), Expect = 0.014
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 208 EKYRPQTFDDIVGNEDTVSRLS-VFAKNGNAPNIIIAGPPGVGKTTTILCLARAL 369
+KY P+TF D++G V LS K + GP G GKT+ A+AL
Sbjct: 358 QKYSPKTFKDMIGQSLVVQALSNAILKRKIGLVYVFYGPHGTGKTSCARVFAKAL 412
>01_05_0631 + 23835120-23836109,23836204-23836674
Length = 486
Score = 35.9 bits (79), Expect = 0.014
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +1
Query: 100 KMSDDDVTI-MEVDEAESKPAKPVAGPSKPTTNLPWIEKYRPQTFDDIVGNEDTVSRLSV 276
K+ D D T+ + ++E ES A + PS TT L K + DD+ E + R
Sbjct: 182 KIKDQDRTLKIYMNEGESWFAIDLHHPSTFTT-LAMDHKQKQSVMDDL---ERFIKRKEY 237
Query: 277 FAKNGNA--PNIIIAGPPGVGKTTTILCLARAL 369
+ K G A ++ GPPG GK++ I +A L
Sbjct: 238 YKKIGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
>01_06_0595 -
30485460-30486097,30486721-30487179,30487339-30487558,
30488229-30489980
Length = 1022
Score = 33.9 bits (74), Expect = 0.055
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 208 EKYRPQTFDDIVGNEDTVSRLS-VFAKNGNAPNIIIAGPPGVGKTTTILCLARAL 369
+K+ P+TF D+VG V LS + + GP G GKT+ A+AL
Sbjct: 354 QKFAPKTFKDVVGQSLVVQALSNAVLRRKIGLVYVFYGPHGTGKTSCARVFAKAL 408
>03_02_0466 -
8690469-8690522,8691008-8691113,8691216-8691457,
8691477-8691546,8692224-8692499,8693058-8693137,
8693408-8693489,8693566-8693663,8693868-8693936,
8694015-8694113,8694681-8694737,8694874-8695039,
8695152-8695196,8695286-8695347,8695425-8695532,
8695719-8695769,8695843-8695944,8696362-8696448,
8696560-8696823,8696977-8697189,8697337-8697398,
8697517-8697849,8697943-8698138
Length = 973
Score = 33.5 bits (73), Expect = 0.073
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +1
Query: 247 NEDTVSRLSVFAKNGNAPN---IIIAGPPGVGKTTTILCLARALLGASFKDAVLELNASN 417
+ED S + NAP +++ GPPG+GK TT+ +A G V+E+NAS+
Sbjct: 336 SEDLTSSFNKRPTTDNAPEQKVLLLCGPPGLGK-TTLAHVAAKHCGYH----VVEINASD 390
Query: 418 DR 423
DR
Sbjct: 391 DR 392
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 130 EVDEAESKPAKPVAGPSKPTTNLPWIEKYRPQTFDDIVGNEDTVSRLSVFAK 285
E ES P P+ T W+EKY P +F +++ +E T + ++ K
Sbjct: 229 ETQNLESCPVTPLV------TEQLWVEKYSPNSFTELLSDEHTNREVLLWLK 274
>07_03_0057 +
12872946-12873152,12873371-12873421,12876335-12876480,
12876567-12876756
Length = 197
Score = 33.1 bits (72), Expect = 0.096
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 298 PNIIIAGPPGVGKTTTILCLARAL 369
PN+++ G PG GKTTT LA A+
Sbjct: 13 PNVLVTGTPGTGKTTTCSLLADAV 36
>05_06_0104 -
25603568-25603867,25603965-25604162,25604247-25604526,
25604615-25605419,25605518-25606673
Length = 912
Score = 33.1 bits (72), Expect = 0.096
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = +1
Query: 232 DDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLGASFKDAVLEL 405
D ++G ++ + R+ N ++ G PGVGKT + LA+ ++ +L++
Sbjct: 181 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDV 238
>02_04_0114 +
19879468-19880671,19882007-19882179,19882265-19882605,
19882698-19882977,19883070-19883267,19883380-19883652
Length = 822
Score = 33.1 bits (72), Expect = 0.096
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +1
Query: 157 AKPVAGPSKPTTNLPWIEKY-RPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVG 333
AKPVA P + + D ++G +D V R+ + ++ G PGVG
Sbjct: 170 AKPVAPPKETALRTYGRDMTGSAAAADPVIGRDDEVDRVVCILCRRTKNSAVLVGAPGVG 229
Query: 334 KTTTILCLAR 363
KT LAR
Sbjct: 230 KTAIAEGLAR 239
>11_03_0031 -
9094643-9095824,9095945-9096034,9096141-9096216,
9096759-9096976,9097283-9097512,9097617-9097683,
9097863-9098048,9098164-9098295,9098380-9098492,
9098771-9098777
Length = 766
Score = 32.7 bits (71), Expect = 0.13
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 9/103 (8%)
Frame = +1
Query: 115 DVTIMEVDEAES-KPAKPVAGPSKPTTNLPWIEKYRPQT--------FDDIVGNEDTVSR 267
+V M D +E +P G TT +P + +Y D +VG ++ V R
Sbjct: 40 EVIRMISDTSEDHQPVSAAVGGGSSTTKIPTLLEYGTNLTKLAEEGKLDPVVGRQNQVDR 99
Query: 268 LSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLGASFKDAV 396
+ N + G PGVGKT LA+ + + + +
Sbjct: 100 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIAAGNVPETI 142
>12_01_0668 -
5682664-5682916,5684542-5684576,5684643-5684693,
5685362-5685505,5685981-5686265,5686369-5686441,
5687123-5687343,5687447-5687524,5687626-5687688,
5688700-5688900
Length = 467
Score = 32.3 bits (70), Expect = 0.17
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 301 NIIIAGPPGVGKTTTILCLARALLGASFKDAVLELNASNDRG 426
+I+ G PGVGKTT + +AR +L F+ V+ ++ SN+ G
Sbjct: 182 SILFLGRPGVGKTTVMREIAR-VLADEFQKRVVIVDTSNEIG 222
>04_03_0687 +
18713603-18713962,18715318-18715539,18717068-18717256,
18717419-18717612,18718193-18718328
Length = 366
Score = 32.3 bits (70), Expect = 0.17
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +1
Query: 202 WIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLGAS 381
W ++ + +D + + D S LS + +I GP GVGK++ I L R+ S
Sbjct: 125 WRDRMKSWGYDPLFLSVDQKSGLSALEETLEGQTTVIVGPSGVGKSSLINAL-RSNQNIS 183
Query: 382 FKDAVLELNASNDR 423
+D + +L N +
Sbjct: 184 EEDPIHKLVEQNSK 197
>03_04_0140 +
17638335-17638583,17638843-17639061,17639206-17639443,
17640614-17640809,17640888-17640942,17641495-17641645,
17642501-17642809,17642950-17643215,17643311-17644237,
17644386-17644712
Length = 978
Score = 32.3 bits (70), Expect = 0.17
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +1
Query: 217 RPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLGASFKDAV 396
R D ++G +D + R N ++ G PGVGKT LA+ ++ A+
Sbjct: 256 RQGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVQGDVPQAL 315
>10_08_1019 -
22299800-22299946,22300040-22300109,22300930-22301066,
22301142-22301195,22301638-22301694,22301814-22301846,
22301942-22302067,22302162-22302815,22303042-22303166,
22303770-22303935
Length = 522
Score = 31.9 bits (69), Expect = 0.22
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Frame = +1
Query: 202 WIEKYRPQTFDDIVGNEDTVSRL-------SVFAKNGNAPNIIIAGPPGVGKTTTILCL 357
W +KYRP +D + N+D L V A+ N +II GP VGK + + L
Sbjct: 290 WADKYRPNFLNDFICNKDAALELYNQGFTPQVTAQECN--HIIFEGPTSVGKRSMVSAL 346
>04_03_0784 -
19610370-19611548,19611830-19611919,19612001-19612076,
19612917-19613134,19613333-19613548,19613974-19614159,
19614242-19614364,19614456-19614571,19615126-19615588
Length = 888
Score = 31.9 bits (69), Expect = 0.22
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +1
Query: 232 DDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLGASFKDAV 396
D +VG +D + R++ N + G PGVGKT LA+ + + +
Sbjct: 238 DPVVGRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETI 292
Score = 29.9 bits (64), Expect = 0.90
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 259 VSRLSVFAKNGNAP--NIIIAGPPGVGKTTTILCLARALLGASFKDAVLELNAS 414
+ R V KN N P + I +GP GVGK+ LA G+ ++A++ L+ S
Sbjct: 588 IRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGS--EEAMIRLDMS 639
>02_01_0611 -
4567839-4568144,4568280-4569209,4569301-4569566,
4569662-4569970,4570497-4570647,4570958-4571012,
4571137-4571512,4571560-4571797,4571878-4572096,
4572629-4572910
Length = 1043
Score = 31.9 bits (69), Expect = 0.22
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +1
Query: 208 EKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALL 372
E R D ++G +D V R N +I G PGVGKT LA+ ++
Sbjct: 324 ELARRGKLDPVIGRDDEVRRCIQILCRRTKNNPVIIGEPGVGKTAIAEGLAQRIV 378
>12_01_0777 - 7095081-7096259,7096636-7096725,7096827-7096902,
7097150-7097367,7097502-7097717,7097922-7098107,
7098181-7098303,7098399-7098514,7099254-7099832,
7101485-7101517,7102485-7103679,7103732-7103797,
7104843-7104905,7105328-7105411
Length = 1407
Score = 31.5 bits (68), Expect = 0.29
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 256 TVSRLSVFAKNGNAP--NIIIAGPPGVGKTTTILCLARALLGASFKDAVLELNAS 414
++ R V KN N P + I AGP GVGK+ LA G+ ++A++ L+ S
Sbjct: 1106 SIRRARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGS--EEAMIRLDMS 1158
Score = 27.5 bits (58), Expect = 4.8
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 232 DDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARAL 369
D +VG + + R+ N + G PGVGKT LA+ +
Sbjct: 757 DPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI 802
>07_03_1756 -
29239137-29239325,29239741-29240259,29240693-29240800,
29240856-29241155,29241730-29241831,29243042-29243209,
29243878-29243991,29244184-29244288,29244372-29244502,
29244794-29244918,29245001-29245172,29245277-29245316,
29245636-29245722,29245803-29245868,29246412-29246510,
29246714-29246836,29247066-29247107,29247195-29247260,
29247362-29247553,29247672-29247737,29248839-29249141
Length = 1038
Score = 31.5 bits (68), Expect = 0.29
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 16/107 (14%)
Frame = +1
Query: 97 IKMSDDDVTIMEVDEAESKPAKPVAGPSKPTTNLPWIEKYRPQTFD----------DIVG 246
+++ ++++T +++ EA S T LPW Y + FD D G
Sbjct: 380 LQVIEEELTKLQLLEASSSEFNVTRNYLDWLTVLPW-GNYSDENFDVHHAQQILDEDHYG 438
Query: 247 NEDTVSRLSVFAKNGNAPN------IIIAGPPGVGKTTTILCLARAL 369
D R+ F G I ++GPPGVGKT+ +ARAL
Sbjct: 439 LSDVKERILEFIAVGKLRGTSQGKIICLSGPPGVGKTSIGRSIARAL 485
>03_02_0741 -
10857656-10857844,10858315-10858848,10859516-10859824,
10860521-10860622,10861446-10861613,10862734-10862847,
10863003-10863107,10863206-10863336,10863680-10863804,
10863890-10864061,10864411-10864505,10864771-10864841,
10864923-10865009,10865119-10865184,10865401-10865499,
10866631-10866672,10866757-10866822,10866910-10867101,
10867224-10867289,10868473-10868811
Length = 1023
Score = 31.1 bits (67), Expect = 0.39
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 16/107 (14%)
Frame = +1
Query: 97 IKMSDDDVTIMEVDEAESKPAKPVAGPSKPTTNLPWIEKYRPQTFD----------DIVG 246
+++ ++++T +++ EA S + T LPW + Y + FD D G
Sbjct: 393 LQVIEEELTKLQLLEASSSEFSVTSNYLDWLTVLPWGD-YSDENFDVLRAQRILDEDHYG 451
Query: 247 NEDTVSRLSVFAKNGNAPN------IIIAGPPGVGKTTTILCLARAL 369
D R+ F G I + GPPGVGKT+ +ARAL
Sbjct: 452 LTDVKERILEFIAVGKLRGSSQGKIICLCGPPGVGKTSIGRSVARAL 498
>03_01_0417 -
3197956-3198438,3198550-3200001,3200116-3200277,
3200351-3201133
Length = 959
Score = 30.3 bits (65), Expect = 0.68
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +1
Query: 241 VGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLGASFKDAVLELNASN 417
+ E + ++ G AP +I GPPG GKT T++ L A + VL ASN
Sbjct: 395 INTEQADAVATILGCRGVAPYVIY-GPPGTGKTMTLVESILQLYTAKRRANVLICAASN 452
>11_06_0346 -
22549699-22549721,22549857-22549999,22550100-22552175,
22552305-22552822
Length = 919
Score = 29.9 bits (64), Expect = 0.90
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 232 DDIVGNEDTVSRLS--VFAKNGNAPNIIIAGPPGVGKTTTILCLARAL 369
D +VG + T + L + A + + + IAGP G+GKTT + L R L
Sbjct: 55 DHLVGIDGTANELLGWLMAADKSLRVMAIAGPAGIGKTTLAMELHRRL 102
>09_06_0067 -
20645012-20645095,20645365-20645466,20645583-20645828,
20646042-20646236,20646343-20646636,20646952-20647134,
20647534-20647593,20647796-20648002,20648081-20648282,
20648367-20648494,20648759-20648842,20648955-20649134,
20649281-20649372,20649620-20649789,20650226-20650337,
20650451-20650554,20651262-20651371
Length = 850
Score = 29.9 bits (64), Expect = 0.90
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 286 NGNAPNIIIAGPPGVGKTTTILCLARAL 369
+ P + GPPGVGKT+ +A+AL
Sbjct: 398 DARGPVLCFVGPPGVGKTSLASSIAKAL 425
>08_02_0520 -
18121561-18121821,18122216-18122470,18122560-18122731,
18122824-18123105,18123159-18123292,18123425-18123508,
18123611-18123901,18123982-18124314,18124620-18124750,
18124826-18124930,18125011-18125167,18125248-18125351,
18125442-18125602,18125800-18126116,18126369-18126650,
18127011-18127312,18127609-18127699,18127771-18127824,
18128110-18128186,18128279-18128438,18128545-18128629,
18129059-18129367,18129514-18129890
Length = 1507
Score = 29.9 bits (64), Expect = 0.90
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARALLGASFK 387
++ GPPG GKTT +L LA LG+ K
Sbjct: 232 LLLGPPGSGKTTLLLALA-GKLGSDLK 257
>11_06_0342 - 22523610-22524332
Length = 240
Score = 29.5 bits (63), Expect = 1.2
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Frame = +1
Query: 154 PAKPVAGPSKPTTNLP-WIEKYRPQTFDDIVGN------EDTVSRLSVFAKNG--NAPNI 306
P +P AG K + P + RPQ +VG ED + +L + G + +
Sbjct: 85 PGRPDAGNGKAARSAPSYHVNDRPQPGPQLVGAAESVGMEDAIGKLGAWLTEGLPDLRVL 144
Query: 307 IIAGPPGVGKTTTILCLAR 363
+ G G+GKTT L L R
Sbjct: 145 AVVGFGGLGKTTLALALHR 163
>09_02_0499 -
9917891-9918148,9918240-9918494,9918769-9918940,
9919056-9919283,9919628-9919761,9919842-9919925,
9920007-9920297,9920569-9920901,9921029-9921171,
9921266-9921379,9921470-9921626,9921709-9921812,
9921914-9922074,9922158-9922474,9922574-9922855,
9923205-9923506,9923603-9923693,9923864-9923917,
9924052-9924128,9924213-9924372,9924473-9924557,
9924635-9924723,9925791-9925925
Length = 1341
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLA 360
++ GPPG GKTT +L LA
Sbjct: 78 LLLGPPGAGKTTLLLALA 95
>09_02_0379 - 8210401-8210567,8210944-8213827
Length = 1016
Score = 29.5 bits (63), Expect = 1.2
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +1
Query: 175 PSKPTTNLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILC 354
P KP N +E+ T +VG E + + + + + P + I G GVGKTT +
Sbjct: 128 PDKPPAN---VERRHIGT--SVVGMECYLDKALGYLRKRDIPVLGIWGMGGVGKTTLLKL 182
Query: 355 LARALLGA---SFKDAVLELNASND 420
+ LGA D V+ + AS D
Sbjct: 183 INNEFLGAVDGLHFDLVICITASRD 207
>07_01_0629 -
4695778-4696077,4696242-4696406,4696497-4696673,
4697157-4697455,4697589-4697751,4697897-4698088,
4698211-4698385,4698527-4698741,4698948-4699385
Length = 707
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 301 NIIIAGPPGVGKTTTI 348
+I++ GPPGVGKTT I
Sbjct: 202 SILVIGPPGVGKTTLI 217
>03_02_0445 -
8551912-8552047,8552729-8552896,8553785-8554068,
8554143-8555386,8556901-8556967,8557059-8557150,
8557269-8557480,8558541-8558623,8559092-8559122,
8559770-8559951,8560557-8560616,8561092-8561289,
8561485-8561539,8562740-8562855,8563012-8563176,
8563310-8563483,8564134-8564333,8564778-8564882,
8565063-8565126,8566452-8566718
Length = 1300
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 187 TTNLPWIEKYRPQTFDDIVGNEDTVSRLSVFAK 285
T NL W +KYRP+T + GN V L+ + K
Sbjct: 367 TANL-WTDKYRPETAAQVCGNSKHVKFLNEWLK 398
>02_04_0067 -
19425019-19425288,19425393-19425647,19425766-19425937,
19426069-19426302,19426523-19426656,19427663-19427746,
19428355-19428645,19428788-19429120,19429317-19429390,
19429464-19429644,19429993-19430096,19430232-19430392,
19430727-19431040,19431583-19431864,19432431-19432732,
19433176-19433266,19433368-19433421,19438917-19438993,
19439081-19439240,19439410-19439494,19439574-19440130
Length = 1404
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARAL 369
++ GPPG GKTT +L LA L
Sbjct: 189 LLLGPPGCGKTTLLLALAGKL 209
>03_06_0678 - 35480711-35484658
Length = 1315
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 250 EDTVSRLSVFAKNGNAPNIIIAGPPGVGKTT 342
E+ V+RL A NG+ I I G G+GKTT
Sbjct: 180 EEIVNRLLAQASNGDLTVIPIVGMGGMGKTT 210
>02_03_0314 -
17600970-17600974,17601230-17601357,17601832-17601924,
17602145-17602257,17602520-17602627,17602724-17602828,
17603185-17603355,17603474-17603652,17603741-17603969,
17604841-17604955,17605137-17605312,17606060-17606143,
17606463-17606630,17607011-17607097,17607201-17607323
Length = 627
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 298 PNIIIAGPPGVGKTTTILCLARALLG 375
P +I GP G GKTT I CL + G
Sbjct: 28 PLTLIVGPNGAGKTTIIECLKLSCTG 53
>02_02_0543 +
11360514-11361350,11361434-11361559,11361648-11361976,
11362078-11362861
Length = 691
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 232 DDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARAL 369
D +VG E+ + R+ + + ++ G GVGKT LA+ +
Sbjct: 70 DPVVGREEEIDRVVCILSRKSKNSAVLVGAAGVGKTAIAEGLAQRI 115
>01_05_0749 +
24890944-24891146,24891414-24891535,24891633-24891721,
24891813-24891848,24892268-24892367,24892524-24892566,
24892645-24892739,24892978-24893036,24893114-24893613,
24893691-24893772,24893864-24894429,24894520-24894655,
24894750-24894812,24894942-24895172,24895282-24895395
Length = 812
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLARALLGASF 384
+++ GPPG GKT LA A GASF
Sbjct: 506 VLLFGPPGTGKTMLAKALANA-AGASF 531
>01_05_0662 -
24103475-24103735,24103831-24104085,24104280-24104451,
24104535-24104762,24104864-24104997,24105101-24105184,
24105273-24105563,24105660-24105992,24106081-24106334,
24106435-24106591,24106674-24106777,24106879-24107039,
24107216-24107529,24107614-24107895,24107991-24108292,
24108367-24108457,24108566-24108619,24108785-24108861,
24108963-24109207,24109322-24109410,24110811-24111254
Length = 1443
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARAL 369
++ GPPG GKTT +L LA L
Sbjct: 181 LLLGPPGSGKTTLLLALAGKL 201
>01_05_0660 -
24071523-24071780,24071873-24072127,24072209-24072380,
24072458-24072685,24072785-24072918,24073005-24073088,
24073231-24073521,24073599-24073931,24074016-24074266,
24074354-24074620,24074707-24074867,24074978-24075294,
24075386-24075667,24075753-24076054,24076147-24076237,
24076326-24076379,24076497-24076573,24076700-24076859,
24077129-24077213,24077421-24077630,24077736-24078097
Length = 1457
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARAL 369
++ GPPG GKTT +L LA L
Sbjct: 194 LLLGPPGSGKTTLLLALAGRL 214
>01_05_0659 -
24061318-24061575,24061664-24061918,24062001-24062172,
24062258-24062381,24062442-24062485,24063601-24063734,
24063822-24063905,24064100-24064390,24064713-24065045,
24065145-24065389,24065644-24065910,24065997-24066157,
24066253-24066569,24066665-24066946,24067024-24067325,
24067398-24067488,24067796-24067849,24067963-24068039,
24068159-24068318,24068653-24068737,24069029-24069238,
24069344-24069732
Length = 1444
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARAL 369
++ GPPG GKTT +L LA L
Sbjct: 203 LLLGPPGSGKTTLLLALAGRL 223
>01_03_0179 +
13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARAL 369
++ GPPG GKTT +L LA L
Sbjct: 233 LLLGPPGSGKTTLLLALAGKL 253
>09_02_0383 - 8259156-8261843
Length = 895
Score = 28.7 bits (61), Expect = 2.1
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 175 PSKPTTNLPWIEKYRPQTFDDIVGNEDTVSRLSVFA--KNGNAPNIIIAGPPGVGKTTTI 348
P KP P +E +RP ++G E + + + K+ N P I I G GVGKTT +
Sbjct: 140 PCKPP---PKVE-HRPIGTSVVIGMEHYLDMVMCYLREKDKNIPVIGIWGMGGVGKTTLL 195
Query: 349 LCLARALLG 375
+ LG
Sbjct: 196 KLINNEFLG 204
>06_03_1497 + 30585074-30586327
Length = 417
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLARALLG 375
I+I+GP G GKT L LA+ L G
Sbjct: 28 IVISGPTGAGKTRLALDLAKRLSG 51
>04_04_0918 -
29411239-29411373,29412276-29412526,29412772-29413009,
29413133-29414251,29414540-29415106
Length = 769
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 271 SVFAKNGNAPNIIIAGPPGVGKTTTILCL 357
S+ + N ++ +I GPPG GKT TI L
Sbjct: 231 SMHSNNSSSSFSLIWGPPGTGKTKTISVL 259
>09_01_0155 -
2301903-2302151,2302334-2302491,2302651-2302819,
2303796-2304839,2305792-2306075,2306318-2307333,
2307937-2308085
Length = 1022
Score = 28.3 bits (60), Expect = 2.7
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 286 NGNAPNIIIAGPPGVGKT 339
N P +II GPPG GKT
Sbjct: 559 NNKRPVLIIQGPPGTGKT 576
>06_01_0042 + 410061-410544,411401-411837
Length = 306
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 286 NGNAPNIII--AGPPGVGKTTTILCLARALLGASFKDAVLELNA 411
+G P +++ +G GVGKTTT LA +L S ++ +A
Sbjct: 32 SGPTPRVVVVTSGKGGVGKTTTTANLAASLARLSLSAVAVDADA 75
>04_04_0193 + 23482177-23484963
Length = 928
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 241 VGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLGAS 381
+G + ++R++ + G I I G PGVGKTT + L AS
Sbjct: 140 IGLDALLARVANAFQEGGTSVIGIYGAPGVGKTTLLHHFNNTFLSAS 186
>03_05_0628 -
26245714-26245755,26245854-26245938,26246022-26246197,
26246325-26246432,26246713-26246788,26246878-26246939,
26247228-26247323,26247735-26247861,26247969-26248036
Length = 279
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 244 GNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARAL 369
GN+ ++ +S ++G A II GP G GK+T + +A L
Sbjct: 54 GNKKVLNGISFKIRHGEAVGII--GPSGTGKSTVLKVMAGLL 93
>03_05_0169 +
21474655-21474771,21474879-21474971,21475553-21475642,
21475728-21475811,21476088-21476252,21476995-21477182,
21477363-21477435,21477766-21477819,21478019-21478276,
21478891-21479097,21479293-21479396,21479809-21479953,
21480108-21480242,21480610-21480783
Length = 628
Score = 28.3 bits (60), Expect = 2.7
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 307 IIAGPPGVGKTTTIL 351
++ GPPG GKTTTI+
Sbjct: 198 LLHGPPGTGKTTTII 212
>02_05_0330 - 27996080-27996757,27996836-27997366,27998124-27998303
Length = 462
Score = 28.3 bits (60), Expect = 2.7
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARALL 372
+I GPPG GKT TI L A+L
Sbjct: 289 LIWGPPGTGKTKTISTLLWAML 310
>02_04_0052 +
19271014-19271627,19272055-19272224,19272321-19272550,
19272657-19272765,19272858-19272985,19273102-19273203,
19273285-19273566,19273660-19273769,19273851-19274145,
19274242-19274475,19274705-19274935,19275167-19275478
Length = 938
Score = 28.3 bits (60), Expect = 2.7
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Frame = +1
Query: 238 IVGNEDTVSRLSVFAKNG----NAPN-----IIIAGPPGVGKTTTILCLARALLGASFKD 390
++G +D V +S K N P+ ++ GP GVGKT LA + G+ +
Sbjct: 625 VIGQDDAVMAISRAVKRSRVGLNDPDRPIATLLFCGPTGVGKTELTKALAASYFGS--ES 682
Query: 391 AVLELNAS 414
A+L L+ S
Sbjct: 683 AMLRLDMS 690
Score = 27.5 bits (58), Expect = 4.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 232 DDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKT 339
D I+G E+ + R+ N I+ G GVGKT
Sbjct: 283 DPIIGREEEIERVVQIICRRTKNNPILLGEAGVGKT 318
>02_05_0459 +
29217728-29217919,29218095-29218190,29219785-29219895,
29219984-29220293,29220745-29220835,29220976-29221285,
29221469-29221617,29221914-29222418
Length = 587
Score = 27.9 bits (59), Expect = 3.6
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 259 VSRLSVFAKNGNAP--NIIIAGPPGVGKTTTILCLAR 363
++R + K+ +AP N++ GPPG GKT +AR
Sbjct: 332 LARATANTKSHDAPFRNMLFYGPPGTGKTLVAREMAR 368
>02_05_0444 -
29073740-29073844,29074417-29074725,29077910-29077981,
29078541-29078633,29078825-29078982,29079247-29079415,
29080204-29081241,29081632-29081759,29081926-29081985,
29082033-29083077
Length = 1058
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 286 NGNAPNIIIAGPPGVGKTTTI 348
N P +II GPPG GKT +
Sbjct: 485 NKKRPVLIIQGPPGTGKTVLL 505
>01_06_0947 +
33238398-33238469,33238721-33238968,33239063-33239321,
33240660-33240839,33240922-33241077,33241176-33241337
Length = 358
Score = 27.9 bits (59), Expect = 3.6
Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 55 IFSLYCIL**YFFGIKMSDDDVTI--MEVDEAESKPAKPVAGPSKPTTNLPWIEKYRPQT 228
I +L ++ Y F + + + + + + D E + K PS P T +P++ P T
Sbjct: 45 ILALIALVGVYIFSVSLKQNGMLLGLKQTDMIEKEREKLCQDPSIPVTEIPYVHYPTPDT 104
Query: 229 F 231
+
Sbjct: 105 Y 105
>12_02_1267 - 27448871-27450445
Length = 524
Score = 27.5 bits (58), Expect = 4.8
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 277 FAKNGNA--PNIIIAGPPGVGKTTTILCLARAL 369
+AK G A ++ GPPG GK+T I +A L
Sbjct: 236 YAKVGKAWKRGYLLHGPPGTGKSTMIAAMANFL 268
>12_01_0833 -
7730761-7731030,7731171-7731425,7731565-7731736,
7731873-7732106,7732362-7732495,7734116-7734199,
7735086-7735376,7735566-7735898,7736351-7736424,
7736558-7736653,7736876-7737029,7737118-7737221,
7737325-7737485,7737774-7738087,7738950-7739231,
7739909-7740210,7740513-7740713,7740924-7741014,
7741424-7741500,7741595-7741754,7742026-7742110,
7742194-7742288
Length = 1322
Score = 27.5 bits (58), Expect = 4.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARALLGASFKDAVLELN 408
++ GPPG GKTT + LA L + + +E N
Sbjct: 35 LLLGPPGCGKTTLLKALAGRLNKSLKETGEIEYN 68
>11_06_0348 - 22561589-22563656,22563788-22564602
Length = 960
Score = 27.5 bits (58), Expect = 4.8
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 232 DDIVGNEDTVSRLS--VFAKNGNAPNIIIAGPPGVGKTTTILCLARAL 369
D +V + T + L + A + + + IAGP G+GKTT + L R L
Sbjct: 156 DHLVAIDGTANELLGWLMAADESLRVMAIAGPAGIGKTTLAMELHRRL 203
>10_08_0489 +
18269824-18270270,18271659-18271948,18272341-18272512,
18272608-18272730,18272832-18272960,18273061-18273255,
18273384-18273470,18273563-18273835,18274047-18274154,
18274769-18275116
Length = 723
Score = 27.5 bits (58), Expect = 4.8
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 250 EDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLGASFKDAVLELN 408
+D + L+ A+ G ++ GP G GK+T + LA L +F D + LN
Sbjct: 88 QDVLQGLTGHAEPGTITALM--GPSGSGKSTLLDALAGRLAANAFLDGTVLLN 138
>06_01_0369 +
2651192-2651862,2652103-2652158,2652816-2652874,
2653094-2653165,2653356-2653439,2654522-2654629,
2655543-2655605,2655733-2655813,2656316-2656421,
2657111-2657244,2657753-2657830,2658462-2658500,
2658673-2658755,2659228-2659300,2659842-2660012
Length = 625
Score = 27.5 bits (58), Expect = 4.8
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLARAL---LGASFKDAVL 399
I++ G PGVGK++ IL LA + +GA A++
Sbjct: 246 ILVGGDPGVGKSSLILQLASIMSENIGAGESSAIV 280
>04_04_1035 +
30283456-30283536,30284823-30285359,30285508-30286512,
30286718-30287042,30287563-30287818,30287901-30288117,
30288743-30289095,30289330-30289833,30291267-30292467,
30292614-30292970,30293258-30293495,30294083-30295125,
30295234-30296649,30296731-30296855,30297036-30297314,
30297352-30297382,30298957-30299022,30299447-30299689,
30299848-30299898,30299980-30300071,30300182-30300249,
30300515-30300600,30300720-30300824,30300994-30301127,
30302403-30302436,30302620-30302892,30303019-30303288,
30303384-30303974,30304065-30304214
Length = 3376
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARAL 369
+I GPPG GKT T+ L AL
Sbjct: 248 LIWGPPGTGKTKTVSALLWAL 268
>04_04_0917 -
29404341-29404519,29404610-29404744,29404898-29405225,
29405313-29405532,29405653-29406647,29407233-29407493,
29407534-29407872,29409309-29409497
Length = 881
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARALL 372
+I GPPG GKT TI + A+L
Sbjct: 315 LIWGPPGTGKTKTISTILWAML 336
>04_03_0826 +
20103105-20103697,20104222-20104391,20104487-20104716,
20104825-20104933,20104967-20105154,20105818-20105919,
20106114-20106395,20106504-20106625,20106708-20107020,
20107096-20107329,20107477-20107767,20107975-20108286
Length = 981
Score = 27.5 bits (58), Expect = 4.8
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 232 DDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARAL 369
D ++G +D + R+ N I+ G GVGKT LA +
Sbjct: 276 DPVIGRKDEIERVVQIICRRTKNNPILLGEAGVGKTAIAEGLAHKI 321
Score = 27.1 bits (57), Expect = 6.3
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 9/56 (16%)
Frame = +1
Query: 238 IVGNEDTVSRLSVFAKNG----NAPN-----IIIAGPPGVGKTTTILCLARALLGA 378
++G +D V +S K N P+ +I GP GVGKT LA + G+
Sbjct: 642 VIGQDDAVLAISKAVKRSRVGLNDPDRPIATLIFCGPTGVGKTELTKALAASYFGS 697
>02_02_0009 +
6068260-6068591,6068797-6068917,6069034-6069122,
6069207-6069291,6069421-6069580,6069667-6069743,
6069848-6069898,6069979-6070069,6070167-6070468,
6070549-6070830,6070911-6071388,6071457-6071560,
6071647-6071809,6071895-6072017,6072099-6072217,
6072304-6072636,6072713-6073003,6073088-6073171,
6073260-6073393,6073478-6073705,6073795-6073966,
6074062-6074316,6074408-6074668
Length = 1444
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARAL 369
++ GPPG GKT+ +L LA L
Sbjct: 184 LLLGPPGSGKTSLLLALAGKL 204
>09_02_0504 -
10013784-10014041,10014558-10014660,10014932-10015093,
10015416-10015549,10015633-10015716,10015839-10016129,
10016362-10016694,10016823-10016965,10017273-10017429,
10017513-10017616,10017728-10017888,10017971-10018287,
10018396-10018677,10018759-10019226,10019338-10019391,
10019689-10019742,10019943-10020021,10020108-10020196,
10021153-10021273,10022321-10022637
Length = 1236
Score = 27.1 bits (57), Expect = 6.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLA 360
++ GPPG GKT+ +L LA
Sbjct: 179 LLLGPPGSGKTSLLLALA 196
>09_02_0501 -
9955987-9956244,9956329-9956583,9956713-9956884,
9957000-9957227,9959102-9959235,9959319-9959402,
9959539-9959829,9960076-9960405,9960526-9960668,
9960970-9961126,9961210-9961313,9961423-9961583,
9961664-9961980,9962094-9962375,9962471-9962772,
9962848-9962938,9963262-9963338,9963428-9963587,
9963682-9963766,9963838-9963949,9964864-9964943,
9968644-9968981
Length = 1386
Score = 27.1 bits (57), Expect = 6.3
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARAL 369
++ GPPG GKT+ ++ LA L
Sbjct: 180 LLLGPPGSGKTSLLMALAGTL 200
>08_02_1345 -
26286448-26286679,26287483-26288038,26288068-26288358,
26288953-26290516
Length = 880
Score = 27.1 bits (57), Expect = 6.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 148 SKPAKPVAGPSKPTTNLPWIEKYRPQ 225
S P P P+K + PWIE +R Q
Sbjct: 448 SVPVPPKKPPAKSVESTPWIEGHRSQ 473
>07_01_0671 + 5036069-5037670
Length = 533
Score = 27.1 bits (57), Expect = 6.3
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +1
Query: 238 IVGNEDTVSRLSVFAKNGNAP---NIIIAGPPGVGKTTTILCLARAL 369
I+ + D R F + P ++ GPPG GK+T I +A L
Sbjct: 259 IMDDLDAFRRSGEFYRRAGKPWKRGYLLHGPPGTGKSTMIASMANYL 305
>03_02_0901 +
12267042-12267182,12267949-12268095,12268163-12268253,
12268367-12268485,12268779-12268969,12269440-12269650,
12270072-12270309,12270944-12271329,12271933-12271956,
12271984-12272077,12272341-12272525,12273025-12273255,
12273665-12273730,12273816-12274034,12274764-12275003,
12275244-12275423,12276269-12276535,12276612-12276815,
12276896-12277048
Length = 1128
Score = 27.1 bits (57), Expect = 6.3
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLAR 363
+++ GPP VGK+ I CL +
Sbjct: 89 VVVQGPPQVGKSLLIKCLVK 108
>02_01_0055 +
410661-411380,411481-413733,414486-414875,414983-418153
Length = 2177
Score = 27.1 bits (57), Expect = 6.3
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 301 NIIIAGPPGVGKTTTILCLARALLGASFKDAVLE 402
NI++ P G GKT + +G KD V +
Sbjct: 535 NILLCAPTGAGKTNVAVLTILQQIGLHMKDGVFD 568
>12_02_0289 - 16914975-16916238,16916246-16916484
Length = 500
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARAL 369
++ GPPG GKTT I +A L
Sbjct: 241 LLHGPPGTGKTTMIGAMANFL 261
>12_02_0277 + 16682836-16684368
Length = 510
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARAL 369
++ GPPG GKTT I +A L
Sbjct: 247 LLYGPPGTGKTTMIGAMANFL 267
>12_02_0275 + 16662206-16663738
Length = 510
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARAL 369
++ GPPG GKTT I +A L
Sbjct: 247 LLYGPPGTGKTTMIGAMANFL 267
>11_06_0338 + 22479804-22480651,22480764-22482954
Length = 1012
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 310 IAGPPGVGKTTTILCLARAL 369
IAGP G+GKTT + L R L
Sbjct: 190 IAGPAGIGKTTLAMELHRRL 209
>10_08_0253 - 16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLA 360
+++ G PGVGKT+ I+ LA
Sbjct: 1645 LLLEGSPGVGKTSLIVALA 1663
>10_06_0007 + 9510385-9510535,9510860-9511433,9511553-9511565
Length = 245
Score = 26.6 bits (56), Expect = 8.3
Identities = 25/83 (30%), Positives = 36/83 (43%)
Frame = +1
Query: 94 GIKMSDDDVTIMEVDEAESKPAKPVAGPSKPTTNLPWIEKYRPQTFDDIVGNEDTVSRLS 273
G+ D+ + MEVD K + G S W+EK P ++++ + S
Sbjct: 25 GLHNLDNAMEAMEVDLGTGKRKRYGEGESAKVLWEQWVEK-NPNNYEEL---KRAGSNPH 80
Query: 274 VFAKNGNAPNIIIAGPPGVGKTT 342
FA NIIIA P +G TT
Sbjct: 81 NFA--NVISNIIIAEDPELGYTT 101
>07_01_1106 - 10187609-10190041,10190292-10191932
Length = 1357
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3
Query: 361 ERGIGS*WSFLHRAGLLLLCWVHF 290
E G+ W FL+R L L W HF
Sbjct: 117 EDDAGNSWRFLYRGSSLTLGWSHF 140
>06_03_1259 - 28800954-28802468
Length = 504
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +1
Query: 262 SRLSVFAKNGNA--PNIIIAGPPGVGKTTTILCLARAL 369
+R +A+ G A ++ GPPG GKT+ + +A L
Sbjct: 242 ARREHYARVGRAWKRGYLLHGPPGTGKTSLVAAIANLL 279
>06_03_1258 + 28796643-28798169
Length = 508
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 277 FAKNGNA--PNIIIAGPPGVGKTTTILCLARAL 369
+A+ G A ++ GPPG GKT+ + +A L
Sbjct: 256 YARAGRAWKRGYLLHGPPGTGKTSLVAAIANLL 288
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 26.6 bits (56), Expect = 8.3
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 15/70 (21%)
Frame = +1
Query: 175 PSK--PTTNLPWIEKYRPQTFDDIVGNEDTVSRLS-----------VFAKNGNAP--NII 309
PSK P NL +EK T+D I G + + + +F G A ++
Sbjct: 167 PSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVL 226
Query: 310 IAGPPGVGKT 339
+ GPPG GKT
Sbjct: 227 LYGPPGTGKT 236
>06_01_0511 +
3688788-3688880,3689050-3689166,3689959-3690066,
3690634-3690825,3691010-3691201,3691484-3691602,
3691740-3691827,3692155-3692274,3692378-3692518,
3693065-3693142
Length = 415
Score = 26.6 bits (56), Expect = 8.3
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +1
Query: 109 DDDVTIMEVDEAESKPAKPVAGPSKPTTNLPWIEKY-RPQTFDDIVGNEDTVSRLSVFAK 285
D V MEVDE ++ + G K L +E P T ++D +L +
Sbjct: 145 DSRVKAMEVDEKPTEDYNDIGGLEKQIQEL--VEAIVLPMT------HKDRFQKLGIRPP 196
Query: 286 NGNAPNIIIAGPPGVGKT 339
G +++ GPPG GKT
Sbjct: 197 KG----VLLYGPPGTGKT 210
>05_07_0306 - 29108860-29109282,29109425-29110441
Length = 479
Score = 26.6 bits (56), Expect = 8.3
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 250 EDTVSRLSVFAKNGNA--PNIIIAGPPGVGKTTTILCLARALLGASFKDAVLELNASND 420
E V R + + G A ++ GPPG GK++ I +A L + + E+ +++D
Sbjct: 233 ERFVKRKDYYRRIGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDLELTEVKSNSD 291
>04_04_0919 -
29422003-29422267,29422411-29422660,29423163-29423481,
29423625-29424794,29424879-29425388,29425449-29425607
Length = 890
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARALL 372
+I GPPG GKT TI L L+
Sbjct: 282 LIWGPPGTGKTKTISVLLLMLM 303
>04_04_0251 +
23930789-23930960,23931065-23931128,23931641-23931747,
23931832-23931899,23932068-23932097,23932357-23932460,
23932558-23932662,23932815-23932904,23932982-23933057,
23933292-23933361,23933799-23933869,23933945-23934035,
23934192-23934319,23934547-23934675,23934762-23934902
Length = 481
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLARAL 369
+++ GPPG GKT+ LA+ L
Sbjct: 219 VLLHGPPGTGKTSLCKALAQKL 240
>03_02_0143 -
5888005-5888088,5888818-5888949,5889485-5889634,
5890540-5890710,5890840-5891007,5891139-5891234,
5891777-5891839,5891949-5892114,5892207-5892274,
5892646-5892789,5893111-5893176,5893329-5893520,
5894567-5894657,5895241-5895329,5895521-5895583,
5895698-5895823,5895902-5895991,5896059-5896181,
5896503-5896619,5896704-5896904,5897643-5897723,
5897897-5897977,5898083-5898184,5898264-5898488,
5898571-5898726,5898798-5899010,5899306-5899455,
5900082-5900204,5900299-5900364,5900555-5900620,
5900686-5900817,5900891-5900965,5901355-5901438,
5901516-5901668,5901741-5901806,5902044-5902205,
5902272-5902388,5902495-5902566,5902702-5902761,
5902869-5902985,5904131-5904430,5904518-5904622,
5905710-5905775,5905853-5906297,5906399-5906567,
5906684-5906736,5906819-5906925
Length = 1981
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 301 NIIIAGPPGVGKTTTILCLARALLGASFKDAVLELN 408
NI++ P G GKT + + F+D +L N
Sbjct: 452 NILVCAPTGAGKTNIAMIAVLHEVKQHFRDGILHKN 487
>02_05_1126 -
34284733-34284810,34285151-34285291,34285424-34285543,
34285787-34285874,34285962-34286080,34286437-34286628,
34286802-34286993,34287309-34287416,34287983-34288099,
34288214-34288315
Length = 418
Score = 26.6 bits (56), Expect = 8.3
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +1
Query: 109 DDDVTIMEVDEAESKPAKPVAGPSKPTTNLPWIEKY-RPQTFDDIVGNEDTVSRLSVFAK 285
D V MEVDE ++ + G K L +E P T ++D +L +
Sbjct: 148 DSRVKAMEVDEKPTEDYNDIGGLEKQIQEL--VEAIVLPMT------HKDRFQKLGIRPP 199
Query: 286 NGNAPNIIIAGPPGVGKT 339
G +++ GPPG GKT
Sbjct: 200 KG----VLLYGPPGTGKT 213
>02_05_0693 -
30977323-30977421,30977783-30977843,30978874-30978996,
30979258-30979340,30979847-30979924,30980375-30980506,
30980685-30980728,30980966-30981090,30981468-30981769,
30981877-30981994,30982444-30982574,30983082-30983276,
30983362-30983646
Length = 591
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 253 DTVSRLSVFAKNGNAPN-IIIAGPPGVGKTTTILCLAR 363
D ++R + N P ++ GPPG GKT++ +A+
Sbjct: 361 DEIARATRCKFETNRPRAVLFEGPPGTGKTSSARVIAK 398
>02_02_0455 +
10445417-10446931,10447370-10447903,10448198-10448278,
10448699-10448770,10449643-10449669
Length = 742
Score = 26.6 bits (56), Expect = 8.3
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +1
Query: 244 GNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLGASFKDAVLELNASND 420
G+ D + S + + P + I G GVGKTT + LL S D V+ + S+D
Sbjct: 207 GSNDASTSTST-SNQVSVPILPIVGIGGVGKTTLAQHICNHLLVKSHFDPVIWIFVSDD 264
>02_01_0789 -
5919271-5919411,5920105-5920215,5920303-5920401,
5920486-5920642,5920774-5920937,5921017-5921079,
5921153-5921377,5922038-5922135,5923283-5923499
Length = 424
Score = 26.6 bits (56), Expect = 8.3
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 15/70 (21%)
Frame = +1
Query: 175 PSK--PTTNLPWIEKYRPQTFDDIVGNEDTVSRLS-----------VFAKNGNAP--NII 309
PSK P NL +EK T+D I G + + + +F G A ++
Sbjct: 145 PSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVL 204
Query: 310 IAGPPGVGKT 339
+ GPPG GKT
Sbjct: 205 LYGPPGTGKT 214
>01_06_0556 +
30207124-30207581,30207692-30207901,30208016-30208100,
30208517-30208676,30208768-30208844,30208985-30209032,
30209504-30209594,30209703-30210004,30210214-30210495,
30210695-30211011,30211113-30211273,30211556-30211665,
30211752-30211902,30212438-30212578,30212688-30212857,
30213485-30213817,30213981-30214271,30214356-30214439,
30214620-30214753,30214946-30215173,30215273-30215444,
30215621-30215875,30215963-30216232
Length = 1509
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARAL 369
++ GPP GKTT +L LA L
Sbjct: 226 LLLGPPSSGKTTLLLALAGKL 246
>01_05_0430 +
22078651-22078677,22079269-22079356,22079669-22079929,
22080693-22080950,22081036-22081160,22082375-22082851,
22082937-22083848
Length = 715
Score = 26.6 bits (56), Expect = 8.3
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +1
Query: 289 GNAPN-IIIAGPPGVGKTTTILCLARALLG 375
G P +++ GPPG GKT LARA+ G
Sbjct: 260 GKLPKGVLLVGPPGTGKT----MLARAIAG 285
>01_01_0548 -
4033077-4033349,4034007-4034261,4034362-4034533,
4034616-4034839,4035168-4035332,4035591-4035881,
4035971-4036303,4036391-4036485,4036570-4036689,
4036778-4036934,4037176-4037279,4037383-4037543,
4037636-4037952,4038655-4038936,4039020-4039321,
4039453-4039543,4040227-4040280,4040367-4040684,
4041008-4041092,4041178-4041266,4041474-4041594,
4042136-4042431
Length = 1434
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARAL 369
++ GPP GKTT +L LA L
Sbjct: 172 LLLGPPSSGKTTLLLALAGRL 192
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,639,605
Number of Sequences: 37544
Number of extensions: 202956
Number of successful extensions: 861
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 790518168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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