Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_F22
(426 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M87338-1|AAB09786.1| 354|Homo sapiens replication factor C, 40-... 139 3e-33
AF045555-4|AAC04860.1| 354|Homo sapiens replication factor C su... 139 3e-33
AC005081-1|AAP22334.1| 354|Homo sapiens unknown protein. 139 3e-33
BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C (a... 135 7e-32
BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C (a... 135 7e-32
AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C (a... 135 7e-32
AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein. 135 7e-32
L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-... 89 6e-18
CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein. 89 6e-18
BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C (a... 89 6e-18
BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C (a... 89 6e-18
AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C (a... 89 6e-18
AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5 ... 89 6e-18
M87339-1|AAB09785.1| 363|Homo sapiens replication factor C, 37-... 84 2e-16
CR536561-1|CAG38798.1| 363|Homo sapiens RFC4 protein. 84 2e-16
BT006987-1|AAP35633.1| 363|Homo sapiens replication factor C (a... 84 2e-16
BC024022-1|AAH24022.1| 363|Homo sapiens replication factor C (a... 84 2e-16
BC017452-1|AAH17452.1| 363|Homo sapiens replication factor C (a... 84 2e-16
AF538718-1|AAM97933.1| 363|Homo sapiens replication factor C (a... 84 2e-16
L07541-1|AAB07268.1| 356|Homo sapiens replication factor C, 38-... 50 2e-06
BT019668-1|AAV38474.1| 356|Homo sapiens replication factor C (a... 50 2e-06
BC000149-1|AAH00149.1| 356|Homo sapiens replication factor C (a... 50 2e-06
AL139081-1|CAH70947.1| 356|Homo sapiens replication factor C (a... 50 2e-06
AK222572-1|BAD96292.1| 356|Homo sapiens replication factor C 3 ... 50 2e-06
AF484446-1|AAL82505.1| 356|Homo sapiens replication factor C (a... 50 2e-06
BX537441-1|CAD97683.1| 670|Homo sapiens hypothetical protein pr... 42 9e-04
BC032304-1|AAH32304.1| 670|Homo sapiens RAD17 homolog (S. pombe... 42 9e-04
AY612854-1|AAT09763.1| 670|Homo sapiens RAD17 homolog (S. pombe... 42 9e-04
AJ131296-1|CAB46364.1| 670|Homo sapiens HRAD17 protein protein. 42 9e-04
AJ004977-1|CAA06251.1| 670|Homo sapiens cell cycle checkpoint p... 42 9e-04
AJ001642-1|CAA04894.1| 670|Homo sapiens cell cycle checkpoint p... 42 9e-04
AF126424-1|AAD17334.1| 670|Homo sapiens cell cycle checkpoint p... 42 9e-04
AF112263-1|AAD38878.1| 670|Homo sapiens hRad17 protein protein. 42 9e-04
AF085736-1|AAC36334.1| 681|Homo sapiens RF-C/activator 1 homolo... 42 9e-04
AF076838-1|AAC95520.1| 670|Homo sapiens Rad17-like protein prot... 42 9e-04
AF017748-1|AAD01620.1| 670|Homo sapiens cell cycle checkpoint p... 42 9e-04
BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase interac... 36 0.043
AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase interac... 36 0.043
AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase interac... 36 0.043
AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase interac... 36 0.043
AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase interac... 36 0.043
AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL... 36 0.043
AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase interac... 36 0.043
AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility as... 36 0.057
AK022797-1|BAB14248.1| 801|Homo sapiens protein ( Homo sapiens ... 36 0.057
AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protei... 36 0.057
L23320-1|AAA16121.1| 1148|Homo sapiens replication factor C larg... 34 0.23
BC051786-1|AAH51786.1| 1148|Homo sapiens RFC1 protein protein. 34 0.23
BC051751-1|AAH51751.1| 1147|Homo sapiens replication factor C (a... 34 0.23
BC035297-1|AAH35297.1| 1148|Homo sapiens replication factor C (a... 34 0.23
AY600371-1|AAS94325.1| 1147|Homo sapiens replication factor C (a... 34 0.23
Z22642-1|CAA80355.1| 1147|Homo sapiens PO-GA protein. 33 0.31
BC050576-1|AAH50576.1| 479|Homo sapiens chromosome 9 open readi... 33 0.31
BC034776-1|AAH34776.1| 479|Homo sapiens chromosome 9 open readi... 33 0.31
BC018184-1|AAH18184.1| 975|Homo sapiens CTF18, chromosome trans... 33 0.31
BC006437-1|AAH06437.1| 1016|Homo sapiens CHTF18 protein protein. 33 0.31
BC006278-1|AAH06278.2| 975|Homo sapiens CTF18, chromosome trans... 33 0.31
AL445645-1|CAH72109.1| 479|Homo sapiens chromosome 9 open readi... 33 0.31
AL160165-5|CAH70535.1| 479|Homo sapiens chromosome 9 open readi... 33 0.31
AL031033-2|CAB53056.1| 260|Homo sapiens protein ( Human DNA seq... 33 0.31
AK057266-1|BAB71402.1| 479|Homo sapiens protein ( Homo sapiens ... 33 0.31
AF040250-1|AAB99788.1| 1147|Homo sapiens DNA binding protein pro... 33 0.31
AE006465-2|AAK61256.1| 1184|Homo sapiens some homology with holl... 33 0.31
AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase interac... 33 0.31
AF482706-1|AAL88672.1| 916|Homo sapiens ribonuclease inhibitor ... 32 0.93
D42046-1|BAA07647.1| 1077|Homo sapiens KIAA0083 protein. 31 1.2
BC053574-1|AAH53574.1| 494|Homo sapiens DNA2L protein protein. 31 1.2
BC041115-1|AAH41115.1| 435|Homo sapiens DNA2L protein protein. 31 1.2
AY072792-1|AAL68396.1| 994|Homo sapiens PAAD and NACHT-containi... 31 1.2
AL136233-5|CAI17238.1| 1040|Homo sapiens DNA2 DNA replication he... 31 1.2
AK056688-1|BAB71254.1| 919|Homo sapiens protein ( Homo sapiens ... 31 1.2
AF479747-1|AAL87104.1| 994|Homo sapiens PYRIN-containing APAF1-... 31 1.2
AF442488-1|AAL35293.1| 994|Homo sapiens NALP4 protein. 31 1.2
X76040-1|CAA53625.1| 937|Homo sapiens Lon protease-like protein... 31 2.2
X74215-1|CAA52291.1| 845|Homo sapiens Lon protease-like protein... 31 2.2
U02389-1|AAA61616.1| 962|Homo sapiens hLON ATP-dependent protea... 31 2.2
BC109218-1|AAI09219.1| 848|Homo sapiens LONP1 protein protein. 31 2.2
BC050326-1|AAH50326.1| 994|Homo sapiens NLR family, pyrin domai... 31 2.2
BC004934-1|AAH04934.1| 517|Homo sapiens Unknown (protein for IM... 31 2.2
BC000981-1|AAH00981.1| 753|Homo sapiens spermatogenesis associa... 31 2.2
BC000235-1|AAH00235.1| 959|Homo sapiens lon peptidase 1, mitoch... 31 2.2
AY682080-1|AAT74625.1| 4646|Homo sapiens dynein, cytoplasmic, he... 31 2.2
AY364261-1|AAQ76820.1| 310|Homo sapiens hypothetical protein pr... 31 2.2
AK096626-1|BAC04829.1| 895|Homo sapiens protein ( Homo sapiens ... 31 2.2
AK023232-1|BAB14482.1| 620|Homo sapiens protein ( Homo sapiens ... 31 2.2
AK022348-1|BAB14017.1| 392|Homo sapiens protein ( Homo sapiens ... 31 2.2
AK001211-1|BAA91556.1| 310|Homo sapiens protein ( Homo sapiens ... 31 2.2
AF059309-1|AAD24414.1| 959|Homo sapiens LON protease protein. 31 2.2
AB002323-1|BAA20783.3| 4658|Homo sapiens KIAA0325 protein protein. 31 2.2
Y18418-1|CAB46271.1| 456|Homo sapiens erythrocyte cytosolic pro... 30 2.8
D80009-1|BAA11504.2| 1285|Homo sapiens KIAA0187 protein. 30 2.8
DQ469310-1|ABF13334.1| 386|Homo sapiens RUVBL1-FK protein. 30 2.8
BT007057-1|AAP35706.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 30 2.8
BC150252-1|AAI50253.1| 1282|Homo sapiens BMS1 homolog, ribosome ... 30 2.8
BC043345-1|AAH43345.1| 1282|Homo sapiens BMS1 homolog, ribosome ... 30 2.8
BC012886-1|AAH12886.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 30 2.8
BC008634-1|AAH08634.1| 310|Homo sapiens ATP binding domain 1 fa... 30 2.8
BC007815-1|AAH07815.1| 310|Homo sapiens ATP binding domain 1 fa... 30 2.8
BC002993-1|AAH02993.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 30 2.8
AY358864-1|AAQ89223.1| 310|Homo sapiens AGAA5828 protein. 30 2.8
AL034380-4|CAB92117.1| 310|Homo sapiens novel protein protein. 30 2.8
AL034380-3|CAI21619.1| 172|Homo sapiens novel protein protein. 30 2.8
AL022344-4|CAI23617.1| 1282|Homo sapiens BMS1-like, ribosome ass... 30 2.8
AK222575-1|BAD96295.1| 456|Homo sapiens TATA binding protein in... 30 2.8
AK222563-1|BAD96283.1| 456|Homo sapiens TATA binding protein in... 30 2.8
AK022535-1|BAB14084.1| 310|Homo sapiens protein ( Homo sapiens ... 30 2.8
AJ010058-1|CAA08986.1| 456|Homo sapiens Nuclear matrix protein ... 30 2.8
AF380344-1|AAM45570.1| 456|Homo sapiens pontin 52 protein. 30 2.8
AF099084-1|AAD04427.1| 456|Homo sapiens Pontin52 protein. 30 2.8
AF098534-1|AAC97951.1| 584|Homo sapiens RAD17 isoform 4 protein. 30 2.8
AF070735-1|AAC77819.1| 456|Homo sapiens RuvB-like protein RUVBL... 30 2.8
AB012122-1|BAA28169.1| 456|Homo sapiens TIP49 protein. 30 2.8
BC007426-1|AAH07426.1| 172|Homo sapiens TAF9 RNA polymerase II,... 30 3.8
BC007349-1|AAH07349.1| 172|Homo sapiens TAF9 RNA polymerase II,... 30 3.8
AJ878881-1|CAI48031.1| 172|Homo sapiens coilin-interacting nulc... 30 3.8
AJ878880-1|CAI48030.1| 172|Homo sapiens coilin-interacting nucl... 30 3.8
AF151895-1|AAD34132.1| 172|Homo sapiens CGI-137 protein protein. 30 3.8
AF110777-1|AAF14860.1| 172|Homo sapiens adrenal gland protein A... 30 3.8
L24544-1|AAA70430.1| 993|Homo sapiens DNA helicase protein. 29 5.0
BC025299-1|AAH25299.1| 868|Homo sapiens Unknown (protein for IM... 29 5.0
AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subf... 29 5.0
AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette tr... 29 5.0
AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette tr... 29 5.0
AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein. 29 5.0
L14754-1|AAA53082.1| 993|Homo sapiens DNA-binding protein protein. 29 6.6
BC105090-1|AAI05091.1| 993|Homo sapiens immunoglobulin mu bindi... 29 6.6
BC105088-1|AAI05089.1| 993|Homo sapiens immunoglobulin mu bindi... 29 6.6
BC035132-1|AAH35132.1| 743|Homo sapiens threonine synthase-like... 29 6.6
BC005102-1|AAH05102.1| 190|Homo sapiens chromosome 1 open readi... 29 6.6
BC000290-1|AAH00290.1| 868|Homo sapiens IGHMBP2 protein protein. 29 6.6
AL512598-6|CAH70791.1| 743|Homo sapiens threonine synthase-like... 29 6.6
AL122003-5|CAI22244.1| 190|Homo sapiens chromosome 1 open readi... 29 6.6
AL122003-4|CAI22243.1| 228|Homo sapiens chromosome 1 open readi... 29 6.6
AF416713-1|AAL16807.1| 190|Homo sapiens unknown protein. 29 6.6
Z75311-1|CAA99729.1| 1318|Homo sapiens RAD50 homologue hsRAD50 p... 29 8.7
U63139-1|AAB07119.1| 1312|Homo sapiens Rad50 protein. 29 8.7
BC140005-1|AAI40006.1| 110|Homo sapiens RAD50 protein protein. 29 8.7
BC130453-1|AAI30454.1| 1726|Homo sapiens ANKRD26 protein protein. 29 8.7
BC108282-1|AAI08283.1| 723|Homo sapiens RAD50 protein protein. 29 8.7
BC073850-1|AAH73850.1| 723|Homo sapiens RAD50 protein protein. 29 8.7
BC062603-1|AAH62603.1| 557|Homo sapiens RAD50 protein protein. 29 8.7
AL162272-4|CAC19649.1| 1710|Homo sapiens novel protein protein. 29 8.7
AK128577-1|BAC87508.1| 1080|Homo sapiens protein ( Homo sapiens ... 29 8.7
AF057299-1|AAD50325.1| 1312|Homo sapiens RAD50-2 protein protein. 29 8.7
AB028997-1|BAA83026.2| 1715|Homo sapiens KIAA1074 protein protein. 29 8.7
>M87338-1|AAB09786.1| 354|Homo sapiens replication factor C, 40-kDa
subunit protein.
Length = 354
Score = 139 bits (337), Expect = 3e-33
Identities = 66/100 (66%), Positives = 77/100 (77%)
Frame = +1
Query: 127 MEVDEAESKPAKPVAGPSKPTTNLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNI 306
+E +++ PA A S LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNI
Sbjct: 13 VEAQDSDPAPAFSKAPGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNI 72
Query: 307 IIAGPPGVGKTTTILCLARALLGASFKDAVLELNASNDRG 426
IIAGPPG GKTT+ILCLARALLG + KDA+LELNASNDRG
Sbjct: 73 IIAGPPGTGKTTSILCLARALLGPALKDAMLELNASNDRG 112
>AF045555-4|AAC04860.1| 354|Homo sapiens replication factor C
subunit 2 protein.
Length = 354
Score = 139 bits (337), Expect = 3e-33
Identities = 66/100 (66%), Positives = 77/100 (77%)
Frame = +1
Query: 127 MEVDEAESKPAKPVAGPSKPTTNLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNI 306
+E +++ PA A S LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNI
Sbjct: 13 VEAQDSDPAPAFSKAPGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNI 72
Query: 307 IIAGPPGVGKTTTILCLARALLGASFKDAVLELNASNDRG 426
IIAGPPG GKTT+ILCLARALLG + KDA+LELNASNDRG
Sbjct: 73 IIAGPPGTGKTTSILCLARALLGPALKDAMLELNASNDRG 112
>AC005081-1|AAP22334.1| 354|Homo sapiens unknown protein.
Length = 354
Score = 139 bits (337), Expect = 3e-33
Identities = 66/100 (66%), Positives = 77/100 (77%)
Frame = +1
Query: 127 MEVDEAESKPAKPVAGPSKPTTNLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNI 306
+E +++ PA A S LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNI
Sbjct: 13 VEAQDSDPAPAFSKAPGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNI 72
Query: 307 IIAGPPGVGKTTTILCLARALLGASFKDAVLELNASNDRG 426
IIAGPPG GKTT+ILCLARALLG + KDA+LELNASNDRG
Sbjct: 73 IIAGPPGTGKTTSILCLARALLGPALKDAMLELNASNDRG 112
>BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 135 bits (326), Expect = 7e-32
Identities = 64/98 (65%), Positives = 75/98 (76%)
Frame = +1
Query: 127 MEVDEAESKPAKPVAGPSKPTTNLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNI 306
+E +++ PA A S LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNI
Sbjct: 13 VEAQDSDPAPAFSKAPGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNI 72
Query: 307 IIAGPPGVGKTTTILCLARALLGASFKDAVLELNASND 420
IIAGPPG GKTT+ILCLARALLG + KDA+LELNASND
Sbjct: 73 IIAGPPGTGKTTSILCLARALLGPALKDAMLELNASND 110
>BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 135 bits (326), Expect = 7e-32
Identities = 64/98 (65%), Positives = 75/98 (76%)
Frame = +1
Query: 127 MEVDEAESKPAKPVAGPSKPTTNLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNI 306
+E +++ PA A S LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNI
Sbjct: 13 VEAQDSDPAPAFSKAPGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNI 72
Query: 307 IIAGPPGVGKTTTILCLARALLGASFKDAVLELNASND 420
IIAGPPG GKTT+ILCLARALLG + KDA+LELNASND
Sbjct: 73 IIAGPPGTGKTTSILCLARALLGPALKDAMLELNASND 110
>AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C
(activator 1) 2 (40kD) protein.
Length = 320
Score = 135 bits (326), Expect = 7e-32
Identities = 64/98 (65%), Positives = 75/98 (76%)
Frame = +1
Query: 127 MEVDEAESKPAKPVAGPSKPTTNLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNI 306
+E +++ PA A S LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNI
Sbjct: 13 VEAQDSDPAPAFSKAPGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNI 72
Query: 307 IIAGPPGVGKTTTILCLARALLGASFKDAVLELNASND 420
IIAGPPG GKTT+ILCLARALLG + KDA+LELNASND
Sbjct: 73 IIAGPPGTGKTTSILCLARALLGPALKDAMLELNASND 110
>AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein.
Length = 320
Score = 135 bits (326), Expect = 7e-32
Identities = 64/98 (65%), Positives = 75/98 (76%)
Frame = +1
Query: 127 MEVDEAESKPAKPVAGPSKPTTNLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNI 306
+E +++ PA A S LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNI
Sbjct: 13 VEAQDSDPAPAFSKAPGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNI 72
Query: 307 IIAGPPGVGKTTTILCLARALLGASFKDAVLELNASND 420
IIAGPPG GKTT+ILCLARALLG + KDA+LELNASND
Sbjct: 73 IIAGPPGTGKTTSILCLARALLGPALKDAMLELNASND 110
>L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-kDa
subunit protein.
Length = 340
Score = 89.0 bits (211), Expect = 6e-18
Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = +1
Query: 193 NLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALL 372
NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GKT+TIL A+ L
Sbjct: 19 NLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLY 78
Query: 373 -GASFKDAVLELNASNDRG 426
F VLELNAS+DRG
Sbjct: 79 KDKEFGSMVLELNASDDRG 97
>CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein.
Length = 340
Score = 89.0 bits (211), Expect = 6e-18
Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = +1
Query: 193 NLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALL 372
NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GKT+TIL A+ L
Sbjct: 19 NLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLY 78
Query: 373 -GASFKDAVLELNASNDRG 426
F VLELNAS+DRG
Sbjct: 79 KDKEFGSMVLELNASDDRG 97
>BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 89.0 bits (211), Expect = 6e-18
Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = +1
Query: 193 NLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALL 372
NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GKT+TIL A+ L
Sbjct: 19 NLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLY 78
Query: 373 -GASFKDAVLELNASNDRG 426
F VLELNAS+DRG
Sbjct: 79 KDKEFGSMVLELNASDDRG 97
>BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 89.0 bits (211), Expect = 6e-18
Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = +1
Query: 193 NLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALL 372
NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GKT+TIL A+ L
Sbjct: 19 NLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLY 78
Query: 373 -GASFKDAVLELNASNDRG 426
F VLELNAS+DRG
Sbjct: 79 KDKEFGSMVLELNASDDRG 97
>AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 89.0 bits (211), Expect = 6e-18
Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = +1
Query: 193 NLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALL 372
NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GKT+TIL A+ L
Sbjct: 19 NLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLY 78
Query: 373 -GASFKDAVLELNASNDRG 426
F VLELNAS+DRG
Sbjct: 79 KDKEFGSMVLELNASDDRG 97
>AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5
isoform 1 variant protein.
Length = 351
Score = 89.0 bits (211), Expect = 6e-18
Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = +1
Query: 193 NLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALL 372
NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GKT+TIL A+ L
Sbjct: 33 NLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAKQLY 92
Query: 373 -GASFKDAVLELNASNDRG 426
F VLELNAS+DRG
Sbjct: 93 KDKEFGSMVLELNASDDRG 111
>M87339-1|AAB09785.1| 363|Homo sapiens replication factor C, 37-kDa
subunit protein.
Length = 363
Score = 84.2 bits (199), Expect = 2e-16
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +1
Query: 169 AGPSKPTTNLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTI 348
+G +K +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TI
Sbjct: 29 SGENKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTI 88
Query: 349 LCLARALLGAS-FKDAVLELNASNDRG 426
L AR L G F+ VLELNAS++RG
Sbjct: 89 LAAARELFGPELFRLRVLELNASDERG 115
>CR536561-1|CAG38798.1| 363|Homo sapiens RFC4 protein.
Length = 363
Score = 84.2 bits (199), Expect = 2e-16
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +1
Query: 169 AGPSKPTTNLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTI 348
+G +K +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TI
Sbjct: 29 SGENKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTI 88
Query: 349 LCLARALLGAS-FKDAVLELNASNDRG 426
L AR L G F+ VLELNAS++RG
Sbjct: 89 LAAARELFGPELFRLRVLELNASDERG 115
>BT006987-1|AAP35633.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 84.2 bits (199), Expect = 2e-16
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +1
Query: 169 AGPSKPTTNLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTI 348
+G +K +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TI
Sbjct: 29 SGENKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTI 88
Query: 349 LCLARALLGAS-FKDAVLELNASNDRG 426
L AR L G F+ VLELNAS++RG
Sbjct: 89 LAAARELFGPELFRLRVLELNASDERG 115
>BC024022-1|AAH24022.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 84.2 bits (199), Expect = 2e-16
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +1
Query: 169 AGPSKPTTNLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTI 348
+G +K +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TI
Sbjct: 29 SGENKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTI 88
Query: 349 LCLARALLGAS-FKDAVLELNASNDRG 426
L AR L G F+ VLELNAS++RG
Sbjct: 89 LAAARELFGPELFRLRVLELNASDERG 115
>BC017452-1|AAH17452.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 84.2 bits (199), Expect = 2e-16
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +1
Query: 169 AGPSKPTTNLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTI 348
+G +K +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TI
Sbjct: 29 SGENKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTI 88
Query: 349 LCLARALLGAS-FKDAVLELNASNDRG 426
L AR L G F+ VLELNAS++RG
Sbjct: 89 LAAARELFGPELFRLRVLELNASDERG 115
>AF538718-1|AAM97933.1| 363|Homo sapiens replication factor C
(activator 1) 4 (37kD) protein.
Length = 363
Score = 84.2 bits (199), Expect = 2e-16
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +1
Query: 169 AGPSKPTTNLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTI 348
+G +K +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TI
Sbjct: 29 SGENKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTI 88
Query: 349 LCLARALLGAS-FKDAVLELNASNDRG 426
L AR L G F+ VLELNAS++RG
Sbjct: 89 LAAARELFGPELFRLRVLELNASDERG 115
>L07541-1|AAB07268.1| 356|Homo sapiens replication factor C, 38-kDa
subunit protein.
Length = 356
Score = 50.4 bits (115), Expect = 2e-06
Identities = 20/67 (29%), Positives = 39/67 (58%)
Frame = +1
Query: 202 WIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLGAS 381
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+C+ R L G
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVG 63
Query: 382 FKDAVLE 402
+ +E
Sbjct: 64 VEKLRIE 70
>BT019668-1|AAV38474.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 50.4 bits (115), Expect = 2e-06
Identities = 20/67 (29%), Positives = 39/67 (58%)
Frame = +1
Query: 202 WIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLGAS 381
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+C+ R L G
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVG 63
Query: 382 FKDAVLE 402
+ +E
Sbjct: 64 VEKLRIE 70
>BC000149-1|AAH00149.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 50.4 bits (115), Expect = 2e-06
Identities = 20/67 (29%), Positives = 39/67 (58%)
Frame = +1
Query: 202 WIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLGAS 381
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+C+ R L G
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVG 63
Query: 382 FKDAVLE 402
+ +E
Sbjct: 64 VEKLRIE 70
>AL139081-1|CAH70947.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 50.4 bits (115), Expect = 2e-06
Identities = 20/67 (29%), Positives = 39/67 (58%)
Frame = +1
Query: 202 WIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLGAS 381
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+C+ R L G
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVG 63
Query: 382 FKDAVLE 402
+ +E
Sbjct: 64 VEKLRIE 70
>AK222572-1|BAD96292.1| 356|Homo sapiens replication factor C 3
isoform 1 variant protein.
Length = 356
Score = 50.4 bits (115), Expect = 2e-06
Identities = 20/67 (29%), Positives = 39/67 (58%)
Frame = +1
Query: 202 WIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLGAS 381
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+C+ R L G
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVG 63
Query: 382 FKDAVLE 402
+ +E
Sbjct: 64 VEKLRIE 70
>AF484446-1|AAL82505.1| 356|Homo sapiens replication factor C
(activator 1) 3 (38kD) protein.
Length = 356
Score = 50.4 bits (115), Expect = 2e-06
Identities = 20/67 (29%), Positives = 39/67 (58%)
Frame = +1
Query: 202 WIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLGAS 381
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+C+ R L G
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVG 63
Query: 382 FKDAVLE 402
+ +E
Sbjct: 64 VEKLRIE 70
>BX537441-1|CAD97683.1| 670|Homo sapiens hypothetical protein
protein.
Length = 670
Score = 41.9 bits (94), Expect = 9e-04
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Frame = +1
Query: 193 NLPWIEKYRPQTFDDIVGNEDTVSRLSVFAK--------NGNAPNIIIAGPPGVGKTTTI 348
N PW++KY+P+T ++ ++ + + + K ++I GPPG GKTTT+
Sbjct: 77 NEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTL 136
Query: 349 LCLAR 363
L++
Sbjct: 137 KILSK 141
>BC032304-1|AAH32304.1| 670|Homo sapiens RAD17 homolog (S. pombe)
protein.
Length = 670
Score = 41.9 bits (94), Expect = 9e-04
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Frame = +1
Query: 193 NLPWIEKYRPQTFDDIVGNEDTVSRLSVFAK--------NGNAPNIIIAGPPGVGKTTTI 348
N PW++KY+P+T ++ ++ + + + K ++I GPPG GKTTT+
Sbjct: 77 NEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTL 136
Query: 349 LCLAR 363
L++
Sbjct: 137 KILSK 141
>AY612854-1|AAT09763.1| 670|Homo sapiens RAD17 homolog (S. pombe)
protein.
Length = 670
Score = 41.9 bits (94), Expect = 9e-04
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Frame = +1
Query: 193 NLPWIEKYRPQTFDDIVGNEDTVSRLSVFAK--------NGNAPNIIIAGPPGVGKTTTI 348
N PW++KY+P+T ++ ++ + + + K ++I GPPG GKTTT+
Sbjct: 77 NEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTL 136
Query: 349 LCLAR 363
L++
Sbjct: 137 KILSK 141
>AJ131296-1|CAB46364.1| 670|Homo sapiens HRAD17 protein protein.
Length = 670
Score = 41.9 bits (94), Expect = 9e-04
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Frame = +1
Query: 193 NLPWIEKYRPQTFDDIVGNEDTVSRLSVFAK--------NGNAPNIIIAGPPGVGKTTTI 348
N PW++KY+P+T ++ ++ + + + K ++I GPPG GKTTT+
Sbjct: 77 NEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTL 136
Query: 349 LCLAR 363
L++
Sbjct: 137 KILSK 141
>AJ004977-1|CAA06251.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 41.9 bits (94), Expect = 9e-04
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Frame = +1
Query: 193 NLPWIEKYRPQTFDDIVGNEDTVSRLSVFAK--------NGNAPNIIIAGPPGVGKTTTI 348
N PW++KY+P+T ++ ++ + + + K ++I GPPG GKTTT+
Sbjct: 77 NEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTL 136
Query: 349 LCLAR 363
L++
Sbjct: 137 KILSK 141
>AJ001642-1|CAA04894.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 41.9 bits (94), Expect = 9e-04
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Frame = +1
Query: 193 NLPWIEKYRPQTFDDIVGNEDTVSRLSVFAK--------NGNAPNIIIAGPPGVGKTTTI 348
N PW++KY+P+T ++ ++ + + + K ++I GPPG GKTTT+
Sbjct: 77 NEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTL 136
Query: 349 LCLAR 363
L++
Sbjct: 137 KILSK 141
>AF126424-1|AAD17334.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 41.9 bits (94), Expect = 9e-04
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Frame = +1
Query: 193 NLPWIEKYRPQTFDDIVGNEDTVSRLSVFAK--------NGNAPNIIIAGPPGVGKTTTI 348
N PW++KY+P+T ++ ++ + + + K ++I GPPG GKTTT+
Sbjct: 77 NEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTL 136
Query: 349 LCLAR 363
L++
Sbjct: 137 KILSK 141
>AF112263-1|AAD38878.1| 670|Homo sapiens hRad17 protein protein.
Length = 670
Score = 41.9 bits (94), Expect = 9e-04
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Frame = +1
Query: 193 NLPWIEKYRPQTFDDIVGNEDTVSRLSVFAK--------NGNAPNIIIAGPPGVGKTTTI 348
N PW++KY+P+T ++ ++ + + + K ++I GPPG GKTTT+
Sbjct: 77 NEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTL 136
Query: 349 LCLAR 363
L++
Sbjct: 137 KILSK 141
>AF085736-1|AAC36334.1| 681|Homo sapiens RF-C/activator 1 homolog
protein.
Length = 681
Score = 41.9 bits (94), Expect = 9e-04
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Frame = +1
Query: 193 NLPWIEKYRPQTFDDIVGNEDTVSRLSVFAK--------NGNAPNIIIAGPPGVGKTTTI 348
N PW++KY+P+T ++ ++ + + + K ++I GPPG GKTTT+
Sbjct: 88 NEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTL 147
Query: 349 LCLAR 363
L++
Sbjct: 148 KILSK 152
>AF076838-1|AAC95520.1| 670|Homo sapiens Rad17-like protein
protein.
Length = 670
Score = 41.9 bits (94), Expect = 9e-04
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Frame = +1
Query: 193 NLPWIEKYRPQTFDDIVGNEDTVSRLSVFAK--------NGNAPNIIIAGPPGVGKTTTI 348
N PW++KY+P+T ++ ++ + + + K ++I GPPG GKTTT+
Sbjct: 77 NEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTL 136
Query: 349 LCLAR 363
L++
Sbjct: 137 KILSK 141
>AF017748-1|AAD01620.1| 670|Homo sapiens cell cycle checkpoint
protein RAD17 protein.
Length = 670
Score = 41.9 bits (94), Expect = 9e-04
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Frame = +1
Query: 193 NLPWIEKYRPQTFDDIVGNEDTVSRLSVFAK--------NGNAPNIIIAGPPGVGKTTTI 348
N PW++KY+P+T ++ ++ + + + K ++I GPPG GKTTT+
Sbjct: 77 NEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTL 136
Query: 349 LCLAR 363
L++
Sbjct: 137 KILSK 141
>BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 36.3 bits (80), Expect = 0.043
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = +1
Query: 199 PWIEKYRPQTFDDIVGNEDTVSR---LSVFAKNGNAPNIIIAGPPGVGKTTTILCLARAL 369
P + RP T D G V + L + P++I+ GPPG GKTT LA +
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTT----LAHII 281
Query: 370 LGASFKDAV--LELNASN 417
S K ++ + L+A+N
Sbjct: 282 ASNSKKHSIRFVTLSATN 299
>AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 445
Score = 36.3 bits (80), Expect = 0.043
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = +1
Query: 199 PWIEKYRPQTFDDIVGNEDTVSR---LSVFAKNGNAPNIIIAGPPGVGKTTTILCLARAL 369
P + RP T D G V + L + P++I+ GPPG GKTT LA +
Sbjct: 6 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTT----LAHII 61
Query: 370 LGASFKDAV--LELNASN 417
S K ++ + L+A+N
Sbjct: 62 ASNSKKHSIRFVTLSATN 79
>AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 665
Score = 36.3 bits (80), Expect = 0.043
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = +1
Query: 199 PWIEKYRPQTFDDIVGNEDTVSR---LSVFAKNGNAPNIIIAGPPGVGKTTTILCLARAL 369
P + RP T D G V + L + P++I+ GPPG GKTT LA +
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTT----LAHII 281
Query: 370 LGASFKDAV--LELNASN 417
S K ++ + L+A+N
Sbjct: 282 ASNSKKHSIRFVTLSATN 299
>AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 36.3 bits (80), Expect = 0.043
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = +1
Query: 199 PWIEKYRPQTFDDIVGNEDTVSR---LSVFAKNGNAPNIIIAGPPGVGKTTTILCLARAL 369
P + RP T D G V + L + P++I+ GPPG GKTT LA +
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTT----LAHII 281
Query: 370 LGASFKDAV--LELNASN 417
S K ++ + L+A+N
Sbjct: 282 ASNSKKHSIRFVTLSATN 299
>AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 665
Score = 36.3 bits (80), Expect = 0.043
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = +1
Query: 199 PWIEKYRPQTFDDIVGNEDTVSR---LSVFAKNGNAPNIIIAGPPGVGKTTTILCLARAL 369
P + RP T D G V + L + P++I+ GPPG GKTT LA +
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTT----LAHII 281
Query: 370 LGASFKDAV--LELNASN 417
S K ++ + L+A+N
Sbjct: 282 ASNSKKHSIRFVTLSATN 299
>AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL
protein.
Length = 445
Score = 36.3 bits (80), Expect = 0.043
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = +1
Query: 199 PWIEKYRPQTFDDIVGNEDTVSR---LSVFAKNGNAPNIIIAGPPGVGKTTTILCLARAL 369
P + RP T D G V + L + P++I+ GPPG GKTT LA +
Sbjct: 6 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTT----LAHII 61
Query: 370 LGASFKDAV--LELNASN 417
S K ++ + L+A+N
Sbjct: 62 ASNSKKHSIRFVTLSATN 79
>AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 646
Score = 36.3 bits (80), Expect = 0.043
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = +1
Query: 199 PWIEKYRPQTFDDIVGNEDTVSR---LSVFAKNGNAPNIIIAGPPGVGKTTTILCLARAL 369
P + RP T D G V + L + P++I+ GPPG GKTT LA +
Sbjct: 207 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTT----LAHII 262
Query: 370 LGASFKDAV--LELNASN 417
S K ++ + L+A+N
Sbjct: 263 ASNSKKHSIRFVTLSATN 280
>AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility
associated gene 1 protein.
Length = 1844
Score = 35.9 bits (79), Expect = 0.057
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 187 TTNLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKN 288
T ++ W EKY+PQT +++GNE + +L + K+
Sbjct: 1049 TEDMLWTEKYQPQTASELIGNELAIKKLHSWLKD 1082
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLARALLGASFKDAVLELNASNDR 423
++I GP GVGKT + A+ L FK + E+NAS+ R
Sbjct: 1128 VLITGPTGVGKTAAVYACAQEL---GFK--IFEVNASSQR 1162
>AK022797-1|BAB14248.1| 801|Homo sapiens protein ( Homo sapiens
cDNA FLJ12735 fis, clone NT2RP2000258, weakly similar to
ACTIVATOR 1 140 KD SUBUNIT. ).
Length = 801
Score = 35.9 bits (79), Expect = 0.057
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 187 TTNLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKN 288
T ++ W EKY+PQT +++GNE + +L + K+
Sbjct: 646 TEDMLWTEKYQPQTASELIGNELAIKKLHSWLKD 679
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLARALLGASFKDAVLELNASNDR 423
++I GP GVGKT + A+ L FK + E+NAS+ R
Sbjct: 725 VLITGPTGVGKTAAVYACAQEL---GFK--IFEVNASSQR 759
>AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protein
protein.
Length = 1844
Score = 35.9 bits (79), Expect = 0.057
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 187 TTNLPWIEKYRPQTFDDIVGNEDTVSRLSVFAKN 288
T ++ W EKY+PQT +++GNE + +L + K+
Sbjct: 1049 TEDMLWTEKYQPQTASELIGNELAIKKLHSWLKD 1082
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLARALLGASFKDAVLELNASNDR 423
++I GP GVGKT + A+ L FK + E+NAS+ R
Sbjct: 1128 VLITGPTGVGKTAAVYACAQEL---GFK--IFEVNASSQR 1162
>L23320-1|AAA16121.1| 1148|Homo sapiens replication factor C large
subunit protein.
Length = 1148
Score = 33.9 bits (74), Expect = 0.23
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARALLGASFKDAVLELNASNDR 423
+++GPPGVGKTTT + + LG S+ +ELNAS+ R
Sbjct: 648 LLSGPPGVGKTTTASLVCQE-LGYSY----VELNASDTR 681
>BC051786-1|AAH51786.1| 1148|Homo sapiens RFC1 protein protein.
Length = 1148
Score = 33.9 bits (74), Expect = 0.23
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARALLGASFKDAVLELNASNDR 423
+++GPPGVGKTTT + + LG S+ +ELNAS+ R
Sbjct: 648 LLSGPPGVGKTTTASLVCQE-LGYSY----VELNASDTR 681
>BC051751-1|AAH51751.1| 1147|Homo sapiens replication factor C
(activator 1) 1, 145kDa protein.
Length = 1147
Score = 33.9 bits (74), Expect = 0.23
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARALLGASFKDAVLELNASNDR 423
+++GPPGVGKTTT + + LG S+ +ELNAS+ R
Sbjct: 647 LLSGPPGVGKTTTASLVCQE-LGYSY----VELNASDTR 680
>BC035297-1|AAH35297.1| 1148|Homo sapiens replication factor C
(activator 1) 1, 145kDa protein.
Length = 1148
Score = 33.9 bits (74), Expect = 0.23
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARALLGASFKDAVLELNASNDR 423
+++GPPGVGKTTT + + LG S+ +ELNAS+ R
Sbjct: 648 LLSGPPGVGKTTTASLVCQE-LGYSY----VELNASDTR 681
>AY600371-1|AAS94325.1| 1147|Homo sapiens replication factor C
(activator 1) 1, 145kDa protein.
Length = 1147
Score = 33.9 bits (74), Expect = 0.23
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARALLGASFKDAVLELNASNDR 423
+++GPPGVGKTTT + + LG S+ +ELNAS+ R
Sbjct: 647 LLSGPPGVGKTTTASLVCQE-LGYSY----VELNASDTR 680
>Z22642-1|CAA80355.1| 1147|Homo sapiens PO-GA protein.
Length = 1147
Score = 33.5 bits (73), Expect = 0.31
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +1
Query: 196 LPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLG 375
L W+ ++ + +D + S N + +++GPPGVGKTTT + + LG
Sbjct: 612 LLWLRNWQKSSSED--KKHSKFGKFSGKDDNSSFKAALLSGPPGVGKTTTASLVCQE-LG 668
Query: 376 ASFKDAVLELNASNDR 423
S+ +ELN S+ R
Sbjct: 669 YSY----VELNRSDTR 680
>BC050576-1|AAH50576.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 33.5 bits (73), Expect = 0.31
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 286 NGNAPNIIIAGPPGVGKTTTILCLARAL 369
N N P I+I GPP GKTT + L + L
Sbjct: 54 NDNVPRIVILGPPASGKTTIAMWLCKHL 81
>BC034776-1|AAH34776.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 33.5 bits (73), Expect = 0.31
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 286 NGNAPNIIIAGPPGVGKTTTILCLARAL 369
N N P I+I GPP GKTT + L + L
Sbjct: 54 NDNVPRIVILGPPASGKTTIAMWLCKHL 81
>BC018184-1|AAH18184.1| 975|Homo sapiens CTF18, chromosome
transmission fidelity factor 18 homolog (S. cerevisiae)
protein.
Length = 975
Score = 33.5 bits (73), Expect = 0.31
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARALLGASFKDAVLELNASNDR 423
++ GPPG+GKTT +AR A + +V+E+NAS+DR
Sbjct: 371 LLCGPPGLGKTTLAHVIAR---HAGY--SVVEMNASDDR 404
>BC006437-1|AAH06437.1| 1016|Homo sapiens CHTF18 protein protein.
Length = 1016
Score = 33.5 bits (73), Expect = 0.31
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARALLGASFKDAVLELNASNDR 423
++ GPPG+GKTT +AR A + +V+E+NAS+DR
Sbjct: 412 LLCGPPGLGKTTLAHVIAR---HAGY--SVVEMNASDDR 445
>BC006278-1|AAH06278.2| 975|Homo sapiens CTF18, chromosome
transmission fidelity factor 18 homolog (S. cerevisiae)
protein.
Length = 975
Score = 33.5 bits (73), Expect = 0.31
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARALLGASFKDAVLELNASNDR 423
++ GPPG+GKTT +AR A + +V+E+NAS+DR
Sbjct: 371 LLCGPPGLGKTTLAHVIAR---HAGY--SVVEMNASDDR 404
>AL445645-1|CAH72109.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 33.5 bits (73), Expect = 0.31
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 286 NGNAPNIIIAGPPGVGKTTTILCLARAL 369
N N P I+I GPP GKTT + L + L
Sbjct: 54 NDNVPRIVILGPPASGKTTIAMWLCKHL 81
>AL160165-5|CAH70535.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 33.5 bits (73), Expect = 0.31
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 286 NGNAPNIIIAGPPGVGKTTTILCLARAL 369
N N P I+I GPP GKTT + L + L
Sbjct: 54 NDNVPRIVILGPPASGKTTIAMWLCKHL 81
>AL031033-2|CAB53056.1| 260|Homo sapiens protein ( Human DNA
sequence from clone LA16c-321D2 on chromosome 16
Contains a gene for a Ribosomal Large Subunit
Pseudouridine Synthase (EC ).
Length = 260
Score = 33.5 bits (73), Expect = 0.31
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARALLGASFKDAVLELNASNDR 423
++ GPPG+GKTT +AR A + +V+E+NAS+DR
Sbjct: 93 LLCGPPGLGKTTLAHVIAR---HAGY--SVVEMNASDDR 126
>AK057266-1|BAB71402.1| 479|Homo sapiens protein ( Homo sapiens
cDNA FLJ32704 fis, clone TESTI2000591, weakly similar to
ADENYLATE KINASE, CHLOROPLAST (EC 2.7.4.3). ).
Length = 479
Score = 33.5 bits (73), Expect = 0.31
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 286 NGNAPNIIIAGPPGVGKTTTILCLARAL 369
N N P I+I GPP GKTT + L + L
Sbjct: 54 NDNVPRIVILGPPASGKTTIAMWLCKHL 81
>AF040250-1|AAB99788.1| 1147|Homo sapiens DNA binding protein
protein.
Length = 1147
Score = 33.5 bits (73), Expect = 0.31
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +1
Query: 196 LPWIEKYRPQTFDDIVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLG 375
L W+ ++ + +D + S N + +++GPPGVGKTTT + + LG
Sbjct: 612 LLWLRNWQKSSSED--KKHSKFGKFSGKDDNSSFKAALLSGPPGVGKTTTASLVCQE-LG 668
Query: 376 ASFKDAVLELNASNDR 423
S+ +ELN S+ R
Sbjct: 669 YSY----VELNRSDTR 680
>AE006465-2|AAK61256.1| 1184|Homo sapiens some homology with
holliday junction DNA helicase RUVB like protein.
Length = 1184
Score = 33.5 bits (73), Expect = 0.31
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARALLGASFKDAVLELNASNDR 423
++ GPPG+GKTT +AR A + +V+E+NAS+DR
Sbjct: 566 LLCGPPGLGKTTLAHVIAR---HAGY--SVVEMNASDDR 599
>AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase
interacting protein protein.
Length = 665
Score = 33.5 bits (73), Expect = 0.31
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = +1
Query: 199 PWIEKYRPQTFDDIVGNEDTVSR---LSVFAKNGNAPNIIIAGPPGVGKTTTILCLARAL 369
P + RP T D G V + L + P++ + GPPG GKTT LA +
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLNLWGPPGCGKTT----LAHII 281
Query: 370 LGASFKDAV--LELNASN 417
S K ++ + L+A+N
Sbjct: 282 ASNSKKHSIRFVTLSATN 299
>AF482706-1|AAL88672.1| 916|Homo sapiens ribonuclease inhibitor 2
protein.
Length = 916
Score = 31.9 bits (69), Expect = 0.93
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +1
Query: 229 FDDIVGNE--DTVSRLSVFAKNGNAPN-IIIAGPPGVGKTTTILCLARALL-GASFKDAV 396
F++ V E D + RL + G P +II GP G+GKTT ++ L A +F+D
Sbjct: 45 FEEEVKQEECDHLDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMAWSDNKTFRDRF 104
Query: 397 L 399
L
Sbjct: 105 L 105
>D42046-1|BAA07647.1| 1077|Homo sapiens KIAA0083 protein.
Length = 1077
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARALLGASF 384
+I G PG GKTTTI L R L F
Sbjct: 662 LIVGMPGTGKTTTICTLVRILYACGF 687
>BC053574-1|AAH53574.1| 494|Homo sapiens DNA2L protein protein.
Length = 494
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARALLGASF 384
+I G PG GKTTTI L R L F
Sbjct: 79 LIVGMPGTGKTTTICTLVRILYACGF 104
>BC041115-1|AAH41115.1| 435|Homo sapiens DNA2L protein protein.
Length = 435
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARALLGASF 384
+I G PG GKTTTI L R L F
Sbjct: 20 LIVGMPGTGKTTTICTLVRILYACGF 45
>AY072792-1|AAL68396.1| 994|Homo sapiens PAAD and NACHT-containing
protein 2 protein.
Length = 994
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1
Query: 229 FDDIVGNE--DTVSRLSVFAKNGNAPN-IIIAGPPGVGKTTTILCLARA 366
F++ V E D + RL + G P +II GP G+GKTT ++ L A
Sbjct: 123 FEEEVKQEECDHLDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMA 171
>AL136233-5|CAI17238.1| 1040|Homo sapiens DNA2 DNA replication
helicase 2-like (yeast) protein.
Length = 1040
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1
Query: 307 IIAGPPGVGKTTTILCLARALLGASF 384
+I G PG GKTTTI L R L F
Sbjct: 645 LIVGMPGTGKTTTICTLVRILYACGF 670
>AK056688-1|BAB71254.1| 919|Homo sapiens protein ( Homo sapiens
cDNA FLJ32126 fis, clone PEBLM2000112, weakly similar to
Homo sapiens nucleotide-binding site protein 1 mRNA. ).
Length = 919
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1
Query: 229 FDDIVGNE--DTVSRLSVFAKNGNAPN-IIIAGPPGVGKTTTILCLARA 366
F++ V E D + RL + G P +II GP G+GKTT ++ L A
Sbjct: 48 FEEEVKQEECDHLDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMA 96
>AF479747-1|AAL87104.1| 994|Homo sapiens PYRIN-containing
APAF1-like protein 4 protein.
Length = 994
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1
Query: 229 FDDIVGNE--DTVSRLSVFAKNGNAPN-IIIAGPPGVGKTTTILCLARA 366
F++ V E D + RL + G P +II GP G+GKTT ++ L A
Sbjct: 123 FEEEVKQEECDHLDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMA 171
>AF442488-1|AAL35293.1| 994|Homo sapiens NALP4 protein.
Length = 994
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1
Query: 229 FDDIVGNE--DTVSRLSVFAKNGNAPN-IIIAGPPGVGKTTTILCLARA 366
F++ V E D + RL + G P +II GP G+GKTT ++ L A
Sbjct: 123 FEEEVKQEECDHLDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMA 171
>X76040-1|CAA53625.1| 937|Homo sapiens Lon protease-like protein
protein.
Length = 937
Score = 30.7 bits (66), Expect = 2.2
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Frame = +1
Query: 232 DDIVGNEDTVSRLSVFAK----NGNAPNIIIA--GPPGVGKTTTILCLARALLGASFKDA 393
+D G ED R+ F G+ I+ GPPGVGKT+ +ARAL F+ +
Sbjct: 467 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 526
Query: 394 V 396
V
Sbjct: 527 V 527
>X74215-1|CAA52291.1| 845|Homo sapiens Lon protease-like protein
protein.
Length = 845
Score = 30.7 bits (66), Expect = 2.2
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Frame = +1
Query: 232 DDIVGNEDTVSRLSVFAK----NGNAPNIIIA--GPPGVGKTTTILCLARALLGASFKDA 393
+D G ED R+ F G+ I+ GPPGVGKT+ +ARAL F+ +
Sbjct: 375 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 434
Query: 394 V 396
V
Sbjct: 435 V 435
>U02389-1|AAA61616.1| 962|Homo sapiens hLON ATP-dependent protease
protein.
Length = 962
Score = 30.7 bits (66), Expect = 2.2
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Frame = +1
Query: 232 DDIVGNEDTVSRLSVFAK----NGNAPNIIIA--GPPGVGKTTTILCLARALLGASFKDA 393
+D G ED R+ F G+ I+ GPPGVGKT+ +ARAL F+ +
Sbjct: 492 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 551
Query: 394 V 396
V
Sbjct: 552 V 552
>BC109218-1|AAI09219.1| 848|Homo sapiens LONP1 protein protein.
Length = 848
Score = 30.7 bits (66), Expect = 2.2
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Frame = +1
Query: 232 DDIVGNEDTVSRLSVFAK----NGNAPNIIIA--GPPGVGKTTTILCLARALLGASFKDA 393
+D G ED R+ F G+ I+ GPPGVGKT+ +ARAL F+ +
Sbjct: 378 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 437
Query: 394 V 396
V
Sbjct: 438 V 438
>BC050326-1|AAH50326.1| 994|Homo sapiens NLR family, pyrin domain
containing 4 protein.
Length = 994
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1
Query: 229 FDDIVGNE--DTVSRLSVFAKNGNAPN-IIIAGPPGVGKTTTILCLARA 366
F++ V E D + RL + G P +II GP G+GKTT ++ L A
Sbjct: 123 FEEEVKQEECDHLDRLFAPKEAGKQPRTVIIQGPQGIGKTTLLMKLMMA 171
>BC004934-1|AAH04934.1| 517|Homo sapiens Unknown (protein for
IMAGE:3606377) protein.
Length = 517
Score = 30.7 bits (66), Expect = 2.2
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Frame = +1
Query: 232 DDIVGNEDTVSRLSVFAK----NGNAPNIIIA--GPPGVGKTTTILCLARALLGASFKDA 393
+D G ED R+ F G+ I+ GPPGVGKT+ +ARAL F+ +
Sbjct: 47 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 106
Query: 394 V 396
V
Sbjct: 107 V 107
>BC000981-1|AAH00981.1| 753|Homo sapiens spermatogenesis associated
5-like 1 protein.
Length = 753
Score = 30.7 bits (66), Expect = 2.2
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLAR 363
+++AGPPGVGKT + +AR
Sbjct: 237 VLLAGPPGVGKTQLVQAVAR 256
>BC000235-1|AAH00235.1| 959|Homo sapiens lon peptidase 1,
mitochondrial protein.
Length = 959
Score = 30.7 bits (66), Expect = 2.2
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Frame = +1
Query: 232 DDIVGNEDTVSRLSVFAK----NGNAPNIIIA--GPPGVGKTTTILCLARALLGASFKDA 393
+D G ED R+ F G+ I+ GPPGVGKT+ +ARAL F+ +
Sbjct: 489 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 548
Query: 394 V 396
V
Sbjct: 549 V 549
>AY682080-1|AAT74625.1| 4646|Homo sapiens dynein, cytoplasmic, heavy
polypeptide 1 protein.
Length = 4646
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 205 IEKYRPQTFDDIVGNEDTVSRLSV-FAKNGNAPNIIIAGPPGVGKTTTILCLARAL 369
+E ++ D +V DTV ++ + +++ GPPG GKT T+ RAL
Sbjct: 2557 VETHKVAAPDVVVPTLDTVRHEALLYTWLAEHKPLVLCGPPGSGKTMTLFSALRAL 2612
>AY364261-1|AAQ76820.1| 310|Homo sapiens hypothetical protein
protein.
Length = 310
Score = 30.7 bits (66), Expect = 2.2
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 310 IAGPPGVGKTTTILCLARALLGASFKDAVLELNASND 420
+ GPPG GKTT L ++ L + AV+ L+ +N+
Sbjct: 14 VTGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>AK096626-1|BAC04829.1| 895|Homo sapiens protein ( Homo sapiens
cDNA FLJ39307 fis, clone OCBBF2013208, highly similar to
MITOCHONDRIAL LON PROTEASE PRECURSOR (EC 3.4.21.-). ).
Length = 895
Score = 30.7 bits (66), Expect = 2.2
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Frame = +1
Query: 232 DDIVGNEDTVSRLSVFAK----NGNAPNIIIA--GPPGVGKTTTILCLARALLGASFKDA 393
+D G ED R+ F G+ I+ GPPGVGKT+ +ARAL F+ +
Sbjct: 425 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 484
Query: 394 V 396
V
Sbjct: 485 V 485
>AK023232-1|BAB14482.1| 620|Homo sapiens protein ( Homo sapiens
cDNA FLJ13170 fis, clone NT2RP3003809, weakly similar to
SAV PROTEIN. ).
Length = 620
Score = 30.7 bits (66), Expect = 2.2
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLAR 363
+++AGPPGVGKT + +AR
Sbjct: 237 VLLAGPPGVGKTQLVQAVAR 256
>AK022348-1|BAB14017.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ12286 fis, clone MAMMA1001768, weakly similar to
CELL DIVISION CYCLE PROTEIN 48 HOMOLOG MJ1156. ).
Length = 392
Score = 30.7 bits (66), Expect = 2.2
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLAR 363
+++AGPPGVGKT + +AR
Sbjct: 237 VLLAGPPGVGKTQLVQAVAR 256
>AK001211-1|BAA91556.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ10349 fis, clone NT2RM2001100. ).
Length = 310
Score = 30.7 bits (66), Expect = 2.2
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 310 IAGPPGVGKTTTILCLARALLGASFKDAVLELNASND 420
+ GPPG GKTT L ++ L + AV+ L+ +N+
Sbjct: 14 VTGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>AF059309-1|AAD24414.1| 959|Homo sapiens LON protease protein.
Length = 959
Score = 30.7 bits (66), Expect = 2.2
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Frame = +1
Query: 232 DDIVGNEDTVSRLSVFAK----NGNAPNIIIA--GPPGVGKTTTILCLARALLGASFKDA 393
+D G ED R+ F G+ I+ GPPGVGKT+ +ARAL F+ +
Sbjct: 489 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 548
Query: 394 V 396
V
Sbjct: 549 V 549
>AB002323-1|BAA20783.3| 4658|Homo sapiens KIAA0325 protein protein.
Length = 4658
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 205 IEKYRPQTFDDIVGNEDTVSRLSV-FAKNGNAPNIIIAGPPGVGKTTTILCLARAL 369
+E ++ D +V DTV ++ + +++ GPPG GKT T+ RAL
Sbjct: 2569 VETHKVAAPDVVVPTLDTVRHEALLYTWLAEHKPLVLCGPPGSGKTMTLFSALRAL 2624
>Y18418-1|CAB46271.1| 456|Homo sapiens erythrocyte cytosolic
protein of 54 kDa, ECP-54 protein.
Length = 456
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLARAL 369
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>D80009-1|BAA11504.2| 1285|Homo sapiens KIAA0187 protein.
Length = 1285
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLAR 363
+++ GPP VGK+T I CL R
Sbjct: 88 VVVMGPPKVGKSTLIQCLIR 107
>DQ469310-1|ABF13334.1| 386|Homo sapiens RUVBL1-FK protein.
Length = 386
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLARAL 369
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>BT007057-1|AAP35706.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLARAL 369
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>BC150252-1|AAI50253.1| 1282|Homo sapiens BMS1 homolog, ribosome
assembly protein (yeast) protein.
Length = 1282
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLAR 363
+++ GPP VGK+T I CL R
Sbjct: 85 VVVMGPPKVGKSTLIQCLIR 104
>BC043345-1|AAH43345.1| 1282|Homo sapiens BMS1 homolog, ribosome
assembly protein (yeast) protein.
Length = 1282
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLAR 363
+++ GPP VGK+T I CL R
Sbjct: 85 VVVMGPPKVGKSTLIQCLIR 104
>BC012886-1|AAH12886.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLARAL 369
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>BC008634-1|AAH08634.1| 310|Homo sapiens ATP binding domain 1
family, member B protein.
Length = 310
Score = 30.3 bits (65), Expect = 2.8
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 310 IAGPPGVGKTTTILCLARALLGASFKDAVLELNASND 420
+ GPPG GKTT L ++ L + AV+ L+ +N+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>BC007815-1|AAH07815.1| 310|Homo sapiens ATP binding domain 1
family, member B protein.
Length = 310
Score = 30.3 bits (65), Expect = 2.8
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 310 IAGPPGVGKTTTILCLARALLGASFKDAVLELNASND 420
+ GPPG GKTT L ++ L + AV+ L+ +N+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>BC002993-1|AAH02993.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLARAL 369
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>AY358864-1|AAQ89223.1| 310|Homo sapiens AGAA5828 protein.
Length = 310
Score = 30.3 bits (65), Expect = 2.8
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 310 IAGPPGVGKTTTILCLARALLGASFKDAVLELNASND 420
+ GPPG GKTT L ++ L + AV+ L+ +N+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>AL034380-4|CAB92117.1| 310|Homo sapiens novel protein protein.
Length = 310
Score = 30.3 bits (65), Expect = 2.8
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 310 IAGPPGVGKTTTILCLARALLGASFKDAVLELNASND 420
+ GPPG GKTT L ++ L + AV+ L+ +N+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>AL034380-3|CAI21619.1| 172|Homo sapiens novel protein protein.
Length = 172
Score = 30.3 bits (65), Expect = 2.8
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 310 IAGPPGVGKTTTILCLARALLGASFKDAVLELNASND 420
+ GPPG GKTT L ++ L + AV+ L+ +N+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>AL022344-4|CAI23617.1| 1282|Homo sapiens BMS1-like, ribosome
assembly protein (yeast) protein.
Length = 1282
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLAR 363
+++ GPP VGK+T I CL R
Sbjct: 85 VVVMGPPKVGKSTLIQCLIR 104
>AK222575-1|BAD96295.1| 456|Homo sapiens TATA binding protein
interacting protein 49 kDa variant protein.
Length = 456
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLARAL 369
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>AK222563-1|BAD96283.1| 456|Homo sapiens TATA binding protein
interacting protein 49 kDa variant protein.
Length = 456
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLARAL 369
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>AK022535-1|BAB14084.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ12473 fis, clone NT2RM1000924, weakly similar to
HYPOTHETICAL 39.7 KD PROTEIN C34E10.2 IN CHROMOSOME III.
).
Length = 310
Score = 30.3 bits (65), Expect = 2.8
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 310 IAGPPGVGKTTTILCLARALLGASFKDAVLELNASND 420
+ GPPG GKTT L ++ L + AV+ L+ +N+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>AJ010058-1|CAA08986.1| 456|Homo sapiens Nuclear matrix protein
NMP238 protein.
Length = 456
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLARAL 369
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>AF380344-1|AAM45570.1| 456|Homo sapiens pontin 52 protein.
Length = 456
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLARAL 369
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>AF099084-1|AAD04427.1| 456|Homo sapiens Pontin52 protein.
Length = 456
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLARAL 369
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>AF098534-1|AAC97951.1| 584|Homo sapiens RAD17 isoform 4 protein.
Length = 584
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLAR 363
++I GPPG GKTTT+ L++
Sbjct: 36 LLITGPPGCGKTTTLKILSK 55
>AF070735-1|AAC77819.1| 456|Homo sapiens RuvB-like protein RUVBL1
protein.
Length = 456
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLARAL 369
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>AB012122-1|BAA28169.1| 456|Homo sapiens TIP49 protein.
Length = 456
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 304 IIIAGPPGVGKTTTILCLARAL 369
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>BC007426-1|AAH07426.1| 172|Homo sapiens TAF9 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 32kDa
protein.
Length = 172
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 298 PNIIIAGPPGVGKTT 342
PNI++ G PGVGKTT
Sbjct: 4 PNILLTGTPGVGKTT 18
>BC007349-1|AAH07349.1| 172|Homo sapiens TAF9 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 32kDa
protein.
Length = 172
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 298 PNIIIAGPPGVGKTT 342
PNI++ G PGVGKTT
Sbjct: 4 PNILLTGTPGVGKTT 18
>AJ878881-1|CAI48031.1| 172|Homo sapiens coilin-interacting nulcear
ATPase protein protein.
Length = 172
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 298 PNIIIAGPPGVGKTT 342
PNI++ G PGVGKTT
Sbjct: 4 PNILLTGTPGVGKTT 18
>AJ878880-1|CAI48030.1| 172|Homo sapiens coilin-interacting nuclear
ATPase protein protein.
Length = 172
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 298 PNIIIAGPPGVGKTT 342
PNI++ G PGVGKTT
Sbjct: 4 PNILLTGTPGVGKTT 18
>AF151895-1|AAD34132.1| 172|Homo sapiens CGI-137 protein protein.
Length = 172
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 298 PNIIIAGPPGVGKTT 342
PNI++ G PGVGKTT
Sbjct: 4 PNILLTGTPGVGKTT 18
>AF110777-1|AAF14860.1| 172|Homo sapiens adrenal gland protein
AD-004 protein.
Length = 172
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 298 PNIIIAGPPGVGKTT 342
PNI++ G PGVGKTT
Sbjct: 4 PNILLTGTPGVGKTT 18
>L24544-1|AAA70430.1| 993|Homo sapiens DNA helicase protein.
Length = 993
Score = 29.5 bits (63), Expect = 5.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 253 DTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTIL 351
DT + +V II GPPG GKTTT++
Sbjct: 193 DTSQKEAVLFALSQKELAIIHGPPGTGKTTTVV 225
>BC025299-1|AAH25299.1| 868|Homo sapiens Unknown (protein for
IMAGE:4890919) protein.
Length = 868
Score = 29.5 bits (63), Expect = 5.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 253 DTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTIL 351
DT + +V II GPPG GKTTT++
Sbjct: 193 DTSQKEAVLFALSQKELAIIHGPPGTGKTTTVV 225
>AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subfamily
A protein.
Length = 2595
Score = 29.5 bits (63), Expect = 5.0
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +1
Query: 238 IVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLGAS 381
I G++ V L++ G+ +++ GP G GKTTTI L L GAS
Sbjct: 1354 IYGSKVAVDNLNLNFYEGHITSLL--GPNGAGKTTTISMLT-GLFGAS 1398
>AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette
transporter family A member 12 protein.
Length = 2277
Score = 29.5 bits (63), Expect = 5.0
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +1
Query: 238 IVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLGAS 381
I G++ V L++ G+ +++ GP G GKTTTI L L GAS
Sbjct: 1036 IYGSKVAVDNLNLNFYEGHITSLL--GPNGAGKTTTISMLT-GLFGAS 1080
>AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette
transporter family A member 12 protein.
Length = 2347
Score = 29.5 bits (63), Expect = 5.0
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +1
Query: 238 IVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLGAS 381
I G++ V L++ G+ +++ GP G GKTTTI L L GAS
Sbjct: 1106 IYGSKVAVDNLNLNFYEGHITSLL--GPNGAGKTTTISMLT-GLFGAS 1150
>AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein.
Length = 2413
Score = 29.5 bits (63), Expect = 5.0
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +1
Query: 238 IVGNEDTVSRLSVFAKNGNAPNIIIAGPPGVGKTTTILCLARALLGAS 381
I G++ V L++ G+ +++ GP G GKTTTI L L GAS
Sbjct: 1354 IYGSKVAVDNLNLNFYEGHITSLL--GPNGAGKTTTISMLT-GLFGAS 1398
>L14754-1|AAA53082.1| 993|Homo sapiens DNA-binding protein protein.
Length = 993
Score = 29.1 bits (62), Expect = 6.6
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 307 IIAGPPGVGKTTTIL 351
II GPPG GKTTT++
Sbjct: 211 IIHGPPGTGKTTTVV 225
>BC105090-1|AAI05091.1| 993|Homo sapiens immunoglobulin mu binding
protein 2 protein.
Length = 993
Score = 29.1 bits (62), Expect = 6.6
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 307 IIAGPPGVGKTTTIL 351
II GPPG GKTTT++
Sbjct: 211 IIHGPPGTGKTTTVV 225
>BC105088-1|AAI05089.1| 993|Homo sapiens immunoglobulin mu binding
protein 2 protein.
Length = 993
Score = 29.1 bits (62), Expect = 6.6
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 307 IIAGPPGVGKTTTIL 351
II GPPG GKTTT++
Sbjct: 211 IIHGPPGTGKTTTVV 225
>BC035132-1|AAH35132.1| 743|Homo sapiens threonine synthase-like 1
(S. cerevisiae) protein.
Length = 743
Score = 29.1 bits (62), Expect = 6.6
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 301 NIIIAGPPGVGKTT 342
NII+ GPPG GKTT
Sbjct: 57 NIILMGPPGAGKTT 70
>BC005102-1|AAH05102.1| 190|Homo sapiens chromosome 1 open reading
frame 57 protein.
Length = 190
Score = 29.1 bits (62), Expect = 6.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 295 APNIIIAGPPGVGKTTTI 348
A ++ + GPPGVGKTT I
Sbjct: 2 ARHVFLTGPPGVGKTTLI 19
>BC000290-1|AAH00290.1| 868|Homo sapiens IGHMBP2 protein protein.
Length = 868
Score = 29.1 bits (62), Expect = 6.6
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 307 IIAGPPGVGKTTTIL 351
II GPPG GKTTT++
Sbjct: 211 IIHGPPGTGKTTTVV 225
>AL512598-6|CAH70791.1| 743|Homo sapiens threonine synthase-like 1
(bacterial) protein.
Length = 743
Score = 29.1 bits (62), Expect = 6.6
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 301 NIIIAGPPGVGKTT 342
NII+ GPPG GKTT
Sbjct: 57 NIILMGPPGAGKTT 70
>AL122003-5|CAI22244.1| 190|Homo sapiens chromosome 1 open reading
frame 57 protein.
Length = 190
Score = 29.1 bits (62), Expect = 6.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 295 APNIIIAGPPGVGKTTTI 348
A ++ + GPPGVGKTT I
Sbjct: 2 ARHVFLTGPPGVGKTTLI 19
>AL122003-4|CAI22243.1| 228|Homo sapiens chromosome 1 open reading
frame 57 protein.
Length = 228
Score = 29.1 bits (62), Expect = 6.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 295 APNIIIAGPPGVGKTTTI 348
A ++ + GPPGVGKTT I
Sbjct: 2 ARHVFLTGPPGVGKTTLI 19
>AF416713-1|AAL16807.1| 190|Homo sapiens unknown protein.
Length = 190
Score = 29.1 bits (62), Expect = 6.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 295 APNIIIAGPPGVGKTTTI 348
A ++ + GPPGVGKTT I
Sbjct: 2 ARHVFLTGPPGVGKTTLI 19
>Z75311-1|CAA99729.1| 1318|Homo sapiens RAD50 homologue hsRAD50
protein.
Length = 1318
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 295 APNIIIAGPPGVGKTTTILCL 357
+P I+ GP G GKTT I CL
Sbjct: 35 SPLTILVGPNGAGKTTIIECL 55
>U63139-1|AAB07119.1| 1312|Homo sapiens Rad50 protein.
Length = 1312
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 295 APNIIIAGPPGVGKTTTILCL 357
+P I+ GP G GKTT I CL
Sbjct: 29 SPLTILVGPNGAGKTTIIECL 49
>BC140005-1|AAI40006.1| 110|Homo sapiens RAD50 protein protein.
Length = 110
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 295 APNIIIAGPPGVGKTTTILCL 357
+P I+ GP G GKTT I CL
Sbjct: 29 SPLTILVGPNGAGKTTIIECL 49
>BC130453-1|AAI30454.1| 1726|Homo sapiens ANKRD26 protein protein.
Length = 1726
Score = 28.7 bits (61), Expect = 8.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 94 GIKMSDDDVTIMEVDEAESKPAKPVAGPSKPTTN 195
G+ DDD ++ E+DE E +P K + N
Sbjct: 659 GLLQVDDDSSLSEIDEDEGRPTKKTSNEKNKVKN 692
>BC108282-1|AAI08283.1| 723|Homo sapiens RAD50 protein protein.
Length = 723
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 295 APNIIIAGPPGVGKTTTILCL 357
+P I+ GP G GKTT I CL
Sbjct: 29 SPLTILVGPNGAGKTTIIECL 49
>BC073850-1|AAH73850.1| 723|Homo sapiens RAD50 protein protein.
Length = 723
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 295 APNIIIAGPPGVGKTTTILCL 357
+P I+ GP G GKTT I CL
Sbjct: 29 SPLTILVGPNGAGKTTIIECL 49
>BC062603-1|AAH62603.1| 557|Homo sapiens RAD50 protein protein.
Length = 557
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 295 APNIIIAGPPGVGKTTTILCL 357
+P I+ GP G GKTT I CL
Sbjct: 29 SPLTILVGPNGAGKTTIIECL 49
>AL162272-4|CAC19649.1| 1710|Homo sapiens novel protein protein.
Length = 1710
Score = 28.7 bits (61), Expect = 8.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 94 GIKMSDDDVTIMEVDEAESKPAKPVAGPSKPTTN 195
G+ DDD ++ E+DE E +P K + N
Sbjct: 643 GLLQVDDDSSLSEIDEDEGRPTKKTSNEKNKVKN 676
>AK128577-1|BAC87508.1| 1080|Homo sapiens protein ( Homo sapiens
cDNA FLJ46736 fis, clone TRACH3020769, weakly similar
to Myosin heavy chain, nonmuscle type B. ).
Length = 1080
Score = 28.7 bits (61), Expect = 8.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 94 GIKMSDDDVTIMEVDEAESKPAKPVAGPSKPTTN 195
G+ DDD ++ E+DE E +P K + N
Sbjct: 200 GLLQVDDDSSLSEIDEDEGRPTKKTSNEKNKVKN 233
>AF057299-1|AAD50325.1| 1312|Homo sapiens RAD50-2 protein protein.
Length = 1312
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 295 APNIIIAGPPGVGKTTTILCL 357
+P I+ GP G GKTT I CL
Sbjct: 29 SPLTILVGPNGAGKTTIIECL 49
>AB028997-1|BAA83026.2| 1715|Homo sapiens KIAA1074 protein protein.
Length = 1715
Score = 28.7 bits (61), Expect = 8.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 94 GIKMSDDDVTIMEVDEAESKPAKPVAGPSKPTTN 195
G+ DDD ++ E+DE E +P K + N
Sbjct: 648 GLLQVDDDSSLSEIDEDEGRPTKKTSNEKNKVKN 681
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,206,242
Number of Sequences: 237096
Number of extensions: 1183541
Number of successful extensions: 4278
Number of sequences better than 10.0: 145
Number of HSP's better than 10.0 without gapping: 4102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4255
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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