BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_F21
(515 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029089-1|ABJ17022.1| 672|Drosophila melanogaster IP11768p pro... 58 7e-09
AE014134-3175|AAF53856.2| 916|Drosophila melanogaster CG10662-P... 58 7e-09
AY061364-1|AAL28912.1| 252|Drosophila melanogaster LD28680p pro... 29 4.9
AE014134-1499|AAN10665.1| 333|Drosophila melanogaster CG31898-P... 29 4.9
BT003642-1|AAO39646.1| 1324|Drosophila melanogaster AT15782p pro... 28 6.5
AE014296-503|AAS64950.1| 342|Drosophila melanogaster CG33234-PA... 28 8.6
>BT029089-1|ABJ17022.1| 672|Drosophila melanogaster IP11768p
protein.
Length = 672
Score = 58.0 bits (134), Expect = 7e-09
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = +3
Query: 156 DKKHKKKGWLRSSFTKAFSRNAKISKTAKH 245
+K +KKKGWLRSSFTKAFSRNAKISKT++H
Sbjct: 579 NKANKKKGWLRSSFTKAFSRNAKISKTSRH 608
>AE014134-3175|AAF53856.2| 916|Drosophila melanogaster CG10662-PA
protein.
Length = 916
Score = 58.0 bits (134), Expect = 7e-09
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = +3
Query: 156 DKKHKKKGWLRSSFTKAFSRNAKISKTAKH 245
+K +KKKGWLRSSFTKAFSRNAKISKT++H
Sbjct: 149 NKANKKKGWLRSSFTKAFSRNAKISKTSRH 178
>AY061364-1|AAL28912.1| 252|Drosophila melanogaster LD28680p
protein.
Length = 252
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 376 KKRLFPPSRKNMPKKNQR 429
KKRLF P+ N+PK NQR
Sbjct: 28 KKRLFTPTDFNIPKANQR 45
>AE014134-1499|AAN10665.1| 333|Drosophila melanogaster CG31898-PA
protein.
Length = 333
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 376 KKRLFPPSRKNMPKKNQR 429
KKRLF P+ N+PK NQR
Sbjct: 28 KKRLFTPTDFNIPKANQR 45
>BT003642-1|AAO39646.1| 1324|Drosophila melanogaster AT15782p
protein.
Length = 1324
Score = 28.3 bits (60), Expect = 6.5
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Frame = +1
Query: 166 TRKKDGCGHR--SQKLSQGTRRFLRRLSTRPSGNCPHRIA-----RLVRITTTIHILYGR 324
+R+ G G R ++LSQG F R S P P RI+ +L + + T R
Sbjct: 47 SRRSSGAGGRLLQKRLSQGQVSFKARNSQLPPPKPPRRISQSLDGKLSQSSLTSTNPSVR 106
Query: 325 EATRTV*NIL-TRLYRIPKKRLFPPSRKNMPKKN 423
EA R + L R ++P +L P +K+ +++
Sbjct: 107 EAERVLDEFLRKRGVQVPTSKLEPSLKKDSKRRS 140
>AE014296-503|AAS64950.1| 342|Drosophila melanogaster CG33234-PA
protein.
Length = 342
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 449 LVDQNRILWFFFGMFFRLGG 390
L++ +I+WFFF +FF L G
Sbjct: 261 LLNHAKIMWFFFIIFFSLSG 280
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,296,219
Number of Sequences: 53049
Number of extensions: 450912
Number of successful extensions: 1570
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1567
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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