Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_F19
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 91 9e-20
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 66 2e-12
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 61 8e-11
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 57 1e-09
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 44 1e-05
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 44 1e-05
SPAC2F3.02 |||ER protein translocation subcomplex subunit|Schizo... 43 2e-05
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 36 0.004
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 34 0.015
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 32 0.059
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 29 0.41
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 27 1.3
SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|c... 27 2.2
SPBC2D10.06 |rep1|rec16|MBF transcription factor complex subunit... 26 2.9
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 26 2.9
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 91.1 bits (216), Expect = 9e-20
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 10/164 (6%)
Frame = +1
Query: 13 TLSLDSRESVEVGVQCIETAFDLTPEDATLALD--LTQFVRSSRGINPLDSG-------- 162
++S + +ES+EV QCI+ +F + PE+ L ++P++
Sbjct: 22 SISEEEKESLEVAAQCIQDSFKIKPEEIKPKSGDRLVAAFEEYEKLHPVEEDSTAHVNKE 81
Query: 163 RAEALKNDGNELMKAGRYREALDRYTRALDIDPRNAVYFCNRAAAHFKLNEHEDAVADCT 342
AE LK +GN + A Y++ALD YT+A++IDP + VY+ NRAAA+ +L + E+AV D
Sbjct: 82 EAEKLKLEGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDAL 141
Query: 343 AALALQPDYGKXXXXXXXXXXXXXXXXEARTAYARAVQLEPDNE 474
L+L P + + A AY + + +P+NE
Sbjct: 142 TCLSLDPHHARAFGRLGRAKLSLGDAAAAADAYKKGLDFDPNNE 185
Score = 35.1 bits (77), Expect = 0.006
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = +1
Query: 151 LDSGRAEALKNDGNELMKAGRYREALDRYTRALDIDPRNAVYFCNRAAAHFKLNEHEDAV 330
LD A A G + G A D Y + LD DP N V AA+ +LN+ D+
Sbjct: 146 LDPHHARAFGRLGRAKLSLGDAAAAADAYKKGLDFDPNNEVLKRGLEAANKQLNQPSDSS 205
Query: 331 A 333
A
Sbjct: 206 A 206
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 66.5 bits (155), Expect = 2e-12
Identities = 30/99 (30%), Positives = 52/99 (52%)
Frame = +1
Query: 175 LKNDGNELMKAGRYREALDRYTRALDIDPRNAVYFCNRAAAHFKLNEHEDAVADCTAALA 354
LKN+ N+ +K G +A+D YT+A+++D NA+ + NR+ AH K ++ A+ D + A+
Sbjct: 8 LKNEANKFLKEGHIVQAIDLYTKAIELDSTNAILYSNRSLAHLKSEDYGLAINDASKAIE 67
Query: 355 LQPDYGKXXXXXXXXXXXXXXXXEARTAYARAVQLEPDN 471
P+Y K EA + +A+ L P +
Sbjct: 68 CDPEYAKAYFRRATAHIAIFQPKEAVGDFRKALALAPSD 106
Score = 41.5 bits (93), Expect = 7e-05
Identities = 24/71 (33%), Positives = 37/71 (52%)
Frame = +1
Query: 151 LDSGRAEALKNDGNELMKAGRYREALDRYTRALDIDPRNAVYFCNRAAAHFKLNEHEDAV 330
LDS A N +K+ Y A++ ++A++ DP A + RA AH + + ++AV
Sbjct: 34 LDSTNAILYSNRSLAHLKSEDYGLAINDASKAIECDPEYAKAYFRRATAHIAIFQPKEAV 93
Query: 331 ADCTAALALQP 363
D ALAL P
Sbjct: 94 GDFRKALALAP 104
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 61.3 bits (142), Expect = 8e-11
Identities = 30/102 (29%), Positives = 50/102 (49%)
Frame = +1
Query: 166 AEALKNDGNELMKAGRYREALDRYTRALDIDPRNAVYFCNRAAAHFKLNEHEDAVADCTA 345
AE LK GN Y+ A+D +T+A+ +D RN + + NR+A + ++ DA+ D T
Sbjct: 2 AEELKAKGNAAFSKKDYKTAIDYFTQAIGLDERNHILYSNRSACYASEKDYADALKDATK 61
Query: 346 ALALQPDYGKXXXXXXXXXXXXXXXXEARTAYARAVQLEPDN 471
L+PD+ K AR+AY ++ + +N
Sbjct: 62 CTELKPDWAKGWSRKGAALHGLGDLDAARSAYEEGLKHDANN 103
Score = 54.4 bits (125), Expect = 1e-08
Identities = 26/75 (34%), Positives = 40/75 (53%)
Frame = +1
Query: 151 LDSGRAEALKNDGNELMKAGRYREALDRYTRALDIDPRNAVYFCNRAAAHFKLNEHEDAV 330
+D +AE + GNEL K+G + A+ YT P + F NRAAA+ K+ + +
Sbjct: 394 IDPDKAEESRVKGNELFKSGDFANAIKEYTEMTKRAPSDPRGFGNRAAAYLKVMAPAECI 453
Query: 331 ADCTAALALQPDYGK 375
DC A+ L P++ K
Sbjct: 454 RDCNKAIELDPNFAK 468
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 57.2 bits (132), Expect = 1e-09
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Frame = +1
Query: 163 RAEALKNDGNELMKAGRYREALDRYTRALDIDPRN----AVYFCNRAAAHFKLNEHEDAV 330
+ E KN GN+L + G Y++A ++Y+ AL IDP N A + NRA +L E+A+
Sbjct: 222 KLENTKNQGNDLFRQGNYQDAYEKYSEALQIDPDNKETVAKLYMNRATVLLRLKRPEEAL 281
Query: 331 ADCTAALALQPDYGKXXXXXXXXXXXXXXXXEARTAYARAVQLE 462
+D ALA+ Y K EA A++L+
Sbjct: 282 SDSDNALAIDSSYLKGLKVRAKAHEALEKWEEAVRDVQSAIELD 325
Score = 51.2 bits (117), Expect = 9e-08
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +1
Query: 166 AEALKNDGNELMKAGRYREALDRYTRALDI--DPRNAVYFCNRAAAHFKLNEHEDAVADC 339
AE K GN K +Y EA+ YT A+D+ D A+Y+ NRAA + ++ E E A+ D
Sbjct: 23 AEKQKAIGNAFYKEKKYAEAIKAYTEAIDLGSDSALAIYYSNRAATYMQIGEFELALCDA 82
Query: 340 TAALALQPDYGK 375
+ ++PD K
Sbjct: 83 KQSDRIKPDVPK 94
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 44.4 bits (100), Expect = 1e-05
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = +1
Query: 166 AEALKNDGNELMKAGRYREALDRYTRALDIDPRNAVYFCNRAAAHFKLNEHEDAVADCTA 345
A LK GN+ Y A+D YT+A+ + ++F NRAA + + + E + D +
Sbjct: 151 AAELKTLGNKAYGQKEYANAIDYYTQAITCS-HDPIFFSNRAACYAAIGDFEQVIKDTSE 209
Query: 346 ALALQPDYGK 375
AL+L Y K
Sbjct: 210 ALSLDSSYVK 219
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 44.0 bits (99), Expect = 1e-05
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +1
Query: 211 RYREALDRYTRALDIDPRNAVYFCNRAAAHFKLNEHEDAVADCTAALALQPDYGKX-XXX 387
+Y +A + Y +A+ D RN ++C+ ++++N+++DA+ + A+ L P +
Sbjct: 599 KYNKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQYQDALDAYSRAIRLNPYISEVWYDL 658
Query: 388 XXXXXXXXXXXXEARTAYARAVQLEPDN 471
+A AY RA +L+P N
Sbjct: 659 GTLYESCHNQISDALDAYQRAAELDPTN 686
>SPAC2F3.02 |||ER protein translocation subcomplex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 192
Score = 43.2 bits (97), Expect = 2e-05
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 13/86 (15%)
Frame = +1
Query: 157 SGRAEALKNDGNELMKAGRYREALDRYTRALDI-------DP------RNAVYFCNRAAA 297
S + +K NE K +Y EA Y AL + +P +V CNRAAA
Sbjct: 59 STQVNKMKQTANEAFKRKKYEEAKKLYGLALQLALNRCTWEPSILTREEASVMLCNRAAA 118
Query: 298 HFKLNEHEDAVADCTAALALQPDYGK 375
L++ +A+AD AAL ++ +YGK
Sbjct: 119 EIALSQFPEALADANAALKIRNNYGK 144
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 35.9 bits (79), Expect = 0.004
Identities = 26/107 (24%), Positives = 41/107 (38%), Gaps = 5/107 (4%)
Frame = +1
Query: 166 AEALKNDGNELMKAGRYREALDRYTRAL-----DIDPRNAVYFCNRAAAHFKLNEHEDAV 330
A+ + GNE + RY++A + YT+AL D D A Y NRAA + + +
Sbjct: 64 AQNFREHGNECFASKRYKDAEEFYTKALAQKCGDKDIEIACY-SNRAACNLLFENYRQVL 122
Query: 331 ADCTAALALQPDYGKXXXXXXXXXXXXXXXXEARTAYARAVQLEPDN 471
DC L + K EA+ + P++
Sbjct: 123 NDCAQVLQRDSTHAKAYYRSAKALVALKRYDEAKECIRLCSLVHPND 169
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 33.9 bits (74), Expect = 0.015
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +1
Query: 214 YREALDRYTRALDIDPRNAVYFCNRAAAHFKLNEHEDAVADCTAALALQPD 366
Y++ALD Y RA +D ++++ +A L++H+ A+ + A+ PD
Sbjct: 549 YKKALDFYDRACKLDEKSSLARFKKAKVLILLHDHDKALVELEQLKAIAPD 599
Score = 24.6 bits (51), Expect = 8.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 187 GNELMKAGRYREALDRYTRALDIDPRNAVYFCNRAA 294
G KAG ++A D + A+ I+P N F N A
Sbjct: 122 GTMYKKAGFLKKATDCFVEAVSINPYNFSAFQNLTA 157
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 31.9 bits (69), Expect = 0.059
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 214 YREALDRYTRALDIDPRNAVYFCNRAAAHFKLNEHEDAVADCTAALALQPDY 369
Y + D + +AL +P N + + AA ++ +AV+ A++LQP Y
Sbjct: 454 YERSADCFRQALQDEPSNEILWNKLGAALTNAEKNTEAVSSYNRAVSLQPQY 505
Score = 30.7 bits (66), Expect = 0.14
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 187 GNELMKAGRYREALDRYTRALDIDPRNAVYFCNRAAAHFKLNEHEDAVADCTAAL 351
G L A + EA+ Y RA+ + P+ N A ++ L EDA AA+
Sbjct: 479 GAALTNAEKNTEAVSSYNRAVSLQPQYVRVRSNMAVSNINLGYFEDAAKHLLAAI 533
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1389
Score = 29.1 bits (62), Expect = 0.41
Identities = 22/78 (28%), Positives = 37/78 (47%)
Frame = +1
Query: 127 RSSRGINPLDSGRAEALKNDGNELMKAGRYREALDRYTRALDIDPRNAVYFCNRAAAHFK 306
+S+ I+P D+ L G ++GRY AL + RA +DP + A
Sbjct: 674 QSALRISPKDTNAWSGL---GEAYARSGRYVSALKAFNRASILDPDDWYVKYFIATLEKD 730
Query: 307 LNEHEDAVADCTAALALQ 360
+ E+E AV+ + LA++
Sbjct: 731 MGEYEVAVSTLSEILAVR 748
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 27.5 bits (58), Expect = 1.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 181 NDGNELMKAGRYREALDRYTRALDIDPRNA 270
ND +L + Y +A+ Y +A+ DP+NA
Sbjct: 639 NDREKLKRQKLYIKAIQSYDQAIKFDPKNA 668
>SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1717
Score = 26.6 bits (56), Expect = 2.2
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 196 LMKAGRYREALDRYTRALDIDPRNAVYFCNRAAAHFKLNEHEDAVADCTAALAL 357
L K G+ R++++ A+D P NA +AA LNE D D L +
Sbjct: 217 LKKFGKPRQSIELPDIAVDACPSNASRIQTLSAAWLLLNEKSDLNVDLCKILII 270
>SPBC2D10.06 |rep1|rec16|MBF transcription factor complex subunit
Rep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 472
Score = 26.2 bits (55), Expect = 2.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 449 LCNSSPTMSPNRQNLRLADDYL 514
+ NS P ++PNRQN +D+ L
Sbjct: 191 ISNSCPEVAPNRQNALFSDETL 212
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 26.2 bits (55), Expect = 2.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 154 DSGRAEALKNDGNELMKAGRYREALDRYTRAL 249
DS E L GN Y EA+D+Y +AL
Sbjct: 28 DSRAIEQLVTQGNMAYAQKNYEEAVDKYGQAL 59
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,547,522
Number of Sequences: 5004
Number of extensions: 23348
Number of successful extensions: 102
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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