Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_F17
(561 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.57
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.57
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 31 0.57
Z79752-6|CAB02080.2| 423|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z80217-8|CAB02294.1| 207|Caenorhabditis elegans Hypothetical pr... 29 1.7
AC024754-1|AAK71405.1| 394|Caenorhabditis elegans Hypothetical ... 29 1.7
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81493-4|CAB04041.1| 165|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 29 2.3
AC024790-3|AAF60637.1| 446|Caenorhabditis elegans Hypothetical ... 29 2.3
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 29 3.0
Z68003-2|CAA91976.2| 560|Caenorhabditis elegans Hypothetical pr... 29 3.0
U97407-7|AAB52480.2| 457|Caenorhabditis elegans Prion-like-(q/n... 29 3.0
AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical ... 29 3.0
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 28 4.0
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 28 4.0
AC024761-6|AAF59467.3| 599|Caenorhabditis elegans Hypothetical ... 28 4.0
AC024761-5|AAU05550.1| 601|Caenorhabditis elegans Hypothetical ... 28 4.0
Z82070-6|CAB04910.1| 321|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81470-1|CAB03881.1| 321|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81106-5|CAB03223.3| 432|Caenorhabditis elegans Hypothetical pr... 28 5.3
AL033536-12|CAD45609.2| 432|Caenorhabditis elegans Hypothetical... 28 5.3
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z82070-7|CAB04909.1| 321|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81041-9|CAJ55253.1| 824|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81041-8|CAB02784.1| 829|Caenorhabditis elegans Hypothetical pr... 27 9.2
U80451-2|AAB37837.1| 223|Caenorhabditis elegans Hypothetical pr... 27 9.2
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 27 9.2
AL021171-3|CAB54258.1| 749|Caenorhabditis elegans Hypothetical ... 27 9.2
AL021171-2|CAA15957.1| 747|Caenorhabditis elegans Hypothetical ... 27 9.2
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 27 9.2
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 0.57
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = +3
Query: 234 PAPGQNPQYGYQPGFAYGQQPTAMQYPNVNPIQTAPPVGFGYPNVSPTP 380
P PG+ P PG P+ P + + PP G YP P P
Sbjct: 302 PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 350
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 0.57
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = +3
Query: 234 PAPGQNPQYGYQPGFAYGQQPTAMQYPNVNPIQTAPPVGFGYPNVSPTP 380
P PG+ P PG P+ P + + PP G YP P P
Sbjct: 312 PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 360
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 31.1 bits (67), Expect = 0.57
Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Frame = +3
Query: 234 PAPGQNPQYGYQPGFAYGQQPTAMQYPNVNPIQTAPPVGFGY-PNVSP--TPAFTP--VI 398
P P NP YGYQ Y Y +P+ AP GY P + PA+ P
Sbjct: 221 PCPAYNP-YGYQGTPGYAPAYNPYSYVLRSPVAAAPGYAQGYAPAYAQGYAPAYAPSYAP 279
Query: 399 EWVPTTPRDAQYVL 440
+ P+ R A Y+L
Sbjct: 280 AYAPSPFRRAMYLL 293
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +3
Query: 291 QPTAMQYPNVNPIQTAPPVGFGYPNVSPTPAFTPVIEWVPTTPRDA 428
QP P P+Q P+ P PTP + P VP P A
Sbjct: 150 QPVIQHVPVPVPVQVPVPIRVPVPVPVPTPVYQPTYCAVPPCPAPA 195
>Z79752-6|CAB02080.2| 423|Caenorhabditis elegans Hypothetical
protein D2005.6 protein.
Length = 423
Score = 30.7 bits (66), Expect = 0.75
Identities = 21/68 (30%), Positives = 28/68 (41%)
Frame = +3
Query: 219 SQLSYPAPGQNPQYGYQPGFAYGQQPTAMQYPNVNPIQTAPPVGFGYPNVSPTPAFTPVI 398
+Q +P+ Q P YGY Y QP A YP P G P + A+ P
Sbjct: 73 TQQQHPSQQQYPYYGYPSYSHYNYQP-ASAYPGA----YGPYAGAYGPYAGASGAYRPYP 127
Query: 399 EWVPTTPR 422
+ P+ PR
Sbjct: 128 QPAPSPPR 135
>Z80217-8|CAB02294.1| 207|Caenorhabditis elegans Hypothetical
protein F37B1.8 protein.
Length = 207
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +3
Query: 273 GFAYGQQPTAMQYPNVNPIQTAPPVGFGYPNVSPTPAFTPVIEWVPTTPRDAQYVLSDRA 452
GF G T VN ++T FG+ N S P T ++E V + P +YV S A
Sbjct: 147 GFLIGNSITYADLVVVNNLETLR--NFGFLNASEQPKLTALLEKVYSQPGIKEYVSSRTA 204
>AC024754-1|AAK71405.1| 394|Caenorhabditis elegans Hypothetical
protein Y32G9B.1 protein.
Length = 394
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 312 PNVNPIQTAPPVGFGYPNVSPTPAFTPVIEWVP--TTPRDAQYVLSDRAVVG 461
P + T PP+ FG P+ P PA P + +P D + + R V+G
Sbjct: 93 PPPSTFPTLPPLTFGTPSTPPPPATLPPMFGIPKQQESNDNTFDMGGRDVLG 144
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +3
Query: 234 PAPGQNPQYGYQPGFAYGQQPTAMQYPNVNPIQTAPPVGFGYPNVS 371
PA P Y G Q PTA P + P+ PP G YP V+
Sbjct: 947 PAAPLLPAYSDLQGCQAPQYPTAQSLPTLPPLPPLPP-GVTYPFVA 991
>Z81493-4|CAB04041.1| 165|Caenorhabditis elegans Hypothetical
protein F01D5.5 protein.
Length = 165
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 317 CEPNTDRSSCRIWLP*CFTNSCIYTCN*MGSNNSKGCTIC 436
C N+ S+C W+ F ++C Y C+ N +K C C
Sbjct: 103 CHDNS--SNCVNWVKNGFCSNCFYKCSDRIKNCAKSCGFC 140
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +3
Query: 234 PAPGQNPQYGYQPGFAYGQQPTAMQYPNVNPIQTAPPVGFGYPNVS 371
PA P Y G Q PTA P + P+ PP G YP V+
Sbjct: 947 PAAPLLPAYSDLQGCQAPQYPTAQSLPTLPPLPPLPP-GVTYPFVA 991
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +3
Query: 234 PAPGQNPQYGYQPGFAYGQQPTAMQYPNVNPIQTAPPVGFGYPNVS 371
PA P Y G Q PTA P + P+ PP G YP V+
Sbjct: 947 PAAPLLPAYSDLQGCQAPQYPTAQSLPTLPPLPPLPP-GVTYPFVA 991
>AC024790-3|AAF60637.1| 446|Caenorhabditis elegans Hypothetical
protein Y47D7A.6 protein.
Length = 446
Score = 29.1 bits (62), Expect = 2.3
Identities = 28/104 (26%), Positives = 39/104 (37%), Gaps = 9/104 (8%)
Frame = +3
Query: 222 QLSYPAPGQ--NPQYGYQPGFAYGQQPTAMQYPN---VNPI-QTAPPVGFGYPNVSPTPA 383
Q Y P P Y Y PT PN P TAPP YP +PT
Sbjct: 220 QCGYRVPDTYPTPPPSYPTAKKYPVAPTYQMPPNDYAQKPAYSTAPPT---YPTEAPTYP 276
Query: 384 FTPVIEWVPTTPRDAQYVLSDRAVVGGYE---GYDGSPLWVIRA 506
T E P+ P + V + YE Y+ +P +++++
Sbjct: 277 TTASYETTPSYPEPSYQVSKKYPIAPTYETTPSYETTPSYLVQS 320
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 28.7 bits (61), Expect = 3.0
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = +3
Query: 234 PAPGQNPQYGYQPGF-AYGQQPTAMQYPNVNPI---QTAPPVGFGYPNVSPTPAFTPVIE 401
P P Q P P A Q P++ Q P Q APPV P +P+PA P +
Sbjct: 369 PTPQQAPPVRQNPPMPAVQQAPSSQQATQAPPKPAPQQAPPVQQNPPKPTPSPA-PPAQK 427
Query: 402 WVPTTPRDA 428
P T + A
Sbjct: 428 AQPVTQQQA 436
Score = 28.3 bits (60), Expect = 4.0
Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = +3
Query: 234 PAPGQNPQYGYQPGF-AYGQQPT-AMQYPNVNPIQTAPPVGFGYPNVSPTPAFTPVIEWV 407
P P Q P P A Q PT A P Q APPV P + A PV++
Sbjct: 298 PVPQQTPPVQQAPPKPAVQQAPTRAAPAPPKPAPQQAPPVQQNPPKPAVQQAQAPVVQQA 357
Query: 408 PTTP 419
P P
Sbjct: 358 PAPP 361
>Z68003-2|CAA91976.2| 560|Caenorhabditis elegans Hypothetical
protein E02H4.2 protein.
Length = 560
Score = 28.7 bits (61), Expect = 3.0
Identities = 26/98 (26%), Positives = 35/98 (35%), Gaps = 8/98 (8%)
Frame = +3
Query: 219 SQLSYPAPGQNPQYGYQPGFAYGQQPTAMQYPNVNPI---QTAPPVGFGYPNVSPTPAF- 386
+++S+ P Q PQYG F Q T P + AP + Y PAF
Sbjct: 6 NRISFVNPTQTPQYGLNEEFKGDPQSTIKSPETRLPAKYERFAPQMTTYYTFPPANPAFF 65
Query: 387 ----TPVIEWVPTTPRDAQYVLSDRAVVGGYEGYDGSP 488
P W+P T Y VV Y + +P
Sbjct: 66 SQPMYPQSSWIPETQNPLVY-FQGAPVVQDYSTFSSAP 102
>U97407-7|AAB52480.2| 457|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 19,
isoform a protein.
Length = 457
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 231 YPAPGQNPQYGYQPGFAYGQQPTAMQYP 314
YPAPG PQY P Q Q+P
Sbjct: 421 YPAPGAQPQYACPPNSVPQPQQQQQQWP 448
>AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical
protein Y47D3B.7 protein.
Length = 1113
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 285 GQQPTAMQYPNVNPIQTAPPVGFGYPNVSPTPAFTPV 395
G+ P +M +NP+QT+PP G GYP P A+ P+
Sbjct: 117 GEGPASM----LNPLQTSPPSG-GYP---PADAYRPL 145
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Frame = +3
Query: 222 QLSYPAP--GQNPQYGYQPGFAYGQQPTAMQ-YPNVNPIQTAPPVGFGYPNVSPTPAFTP 392
+ SY P G PQ AY + T + Y V T P P + T A+ P
Sbjct: 105 EYSYNVPQCGGVPQDVTSTQEAYPSEETTVNPYAPVEEATTTPAEDVTVPEETTTEAYAP 164
Query: 393 VIEWVPTTPRD 425
V ++ TTP +
Sbjct: 165 VDDYSTTTPAE 175
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Frame = +3
Query: 222 QLSYPAP--GQNPQYGYQPGFAYGQQPTAMQ-YPNVNPIQTAPPVGFGYPNVSPTPAFTP 392
+ SY P G PQ AY + T + Y V T P P + T A+ P
Sbjct: 105 EYSYNVPQCGGVPQDVTSTQEAYPSEETTVNPYAPVEEATTTPAEDVTVPEETTTEAYAP 164
Query: 393 VIEWVPTTPRD 425
V ++ TTP +
Sbjct: 165 VDDYSTTTPAE 175
>AC024761-6|AAF59467.3| 599|Caenorhabditis elegans Hypothetical
protein Y38C1AA.5a protein.
Length = 599
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +3
Query: 237 APGQNPQYGY--QPGFAYGQQPTAMQYPNVNPIQTAPPVGFGYPNVSPTPAFTPVIEWVP 410
+P ++P GY +P G +PN+ Q +PPV V T PV+ P
Sbjct: 219 SPAKDPSEGYVTRPISTVGHPSPPPLFPNIPVPQRSPPV---VARVFTTSTMAPVMFTFP 275
Query: 411 TT 416
TT
Sbjct: 276 TT 277
>AC024761-5|AAU05550.1| 601|Caenorhabditis elegans Hypothetical
protein Y38C1AA.5b protein.
Length = 601
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +3
Query: 237 APGQNPQYGY--QPGFAYGQQPTAMQYPNVNPIQTAPPVGFGYPNVSPTPAFTPVIEWVP 410
+P ++P GY +P G +PN+ Q +PPV V T PV+ P
Sbjct: 221 SPAKDPSEGYVTRPISTVGHPSPPPLFPNIPVPQRSPPV---VARVFTTSTMAPVMFTFP 277
Query: 411 TT 416
TT
Sbjct: 278 TT 279
>Z82070-6|CAB04910.1| 321|Caenorhabditis elegans Hypothetical
protein W04E12.6 protein.
Length = 321
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 333 TAPPVGFGYPNVSPTPAFTPVIEWVPTTPRDAQY 434
T PP+ P PTPA P+ + VP+ + Y
Sbjct: 155 TCPPITTPIPTTCPTPAPCPIKQCVPSCDQGWTY 188
>Z81470-1|CAB03881.1| 321|Caenorhabditis elegans Hypothetical
protein C14A6.1 protein.
Length = 321
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 333 TAPPVGFGYPNVSPTPAFTPVIEWVPTTPRDAQY 434
T PP+ P PTPA P+ + VP+ + Y
Sbjct: 155 TCPPITTPIPTTCPTPAPCPIKQCVPSCDQGWTY 188
>Z81106-5|CAB03223.3| 432|Caenorhabditis elegans Hypothetical
protein R06C1.6 protein.
Length = 432
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/52 (30%), Positives = 20/52 (38%)
Frame = +3
Query: 219 SQLSYPAPGQNPQYGYQPGFAYGQQPTAMQYPNVNPIQTAPPVGFGYPNVSP 374
S +P G Y P + P +Y N Q P GYPN+SP
Sbjct: 178 SPSGFPDLGSPGSSNYNPA-SQKSSPPLSKYSQNNQGQRNSPPNHGYPNMSP 228
>AL033536-12|CAD45609.2| 432|Caenorhabditis elegans Hypothetical
protein R06C1.6 protein.
Length = 432
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/52 (30%), Positives = 20/52 (38%)
Frame = +3
Query: 219 SQLSYPAPGQNPQYGYQPGFAYGQQPTAMQYPNVNPIQTAPPVGFGYPNVSP 374
S +P G Y P + P +Y N Q P GYPN+SP
Sbjct: 178 SPSGFPDLGSPGSSNYNPA-SQKSSPPLSKYSQNNQGQRNSPPNHGYPNMSP 228
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
F46C3.3 protein.
Length = 2557
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 306 QYPNVNPIQTAPPVGFGYPNVSPTPAFTPVI 398
Q+ P+ APP F YP P + PV+
Sbjct: 1200 QHEEYTPMNFAPPPTFTYPQQMPMMQYVPVM 1230
>Z82070-7|CAB04909.1| 321|Caenorhabditis elegans Hypothetical
protein W04E12.8 protein.
Length = 321
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 333 TAPPVGFGYPNVSPTPAFTPVIEWVPTTPRDAQY 434
T PP+ P PTPA PV VP+ + Y
Sbjct: 155 TCPPITTPIPTTCPTPAPCPVKTCVPSCDQGWTY 188
>Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical
protein F29C12.1b protein.
Length = 590
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 222 QLSYPAPGQNPQYGYQPGFAYGQQPTAMQYPNVNPIQTAPP 344
Q+ YP +G QP YGQQ + + NP Q P
Sbjct: 195 QVQYPQQAAQIPFGQQPQQGYGQQVDNI-FNQPNPFQLPTP 234
>Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical
protein F29C12.1a protein.
Length = 592
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 222 QLSYPAPGQNPQYGYQPGFAYGQQPTAMQYPNVNPIQTAPP 344
Q+ YP +G QP YGQQ + + NP Q P
Sbjct: 197 QVQYPQQAAQIPFGQQPQQGYGQQVDNI-FNQPNPFQLPTP 236
>Z81041-9|CAJ55253.1| 824|Caenorhabditis elegans Hypothetical
protein C27A7.1b protein.
Length = 824
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 270 PGFAYGQQPTAMQYPNVNPIQTAPPVGFGYPNVSP-TPAFTP 392
PGF G PT P V PI P+ G PN +P +P +P
Sbjct: 115 PGFPMGPSPTTQTPPGVPPIS---PIVTG-PNTTPESPRRSP 152
>Z81041-8|CAB02784.1| 829|Caenorhabditis elegans Hypothetical
protein C27A7.1a protein.
Length = 829
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 270 PGFAYGQQPTAMQYPNVNPIQTAPPVGFGYPNVSP-TPAFTP 392
PGF G PT P V PI P+ G PN +P +P +P
Sbjct: 120 PGFPMGPSPTTQTPPGVPPIS---PIVTG-PNTTPESPRRSP 157
>U80451-2|AAB37837.1| 223|Caenorhabditis elegans Hypothetical
protein F11G11.5 protein.
Length = 223
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +3
Query: 234 PAPGQNP-QYGYQPGFAYGQQPTAMQYPNVNPIQTAPPVGFGYPN 365
P P P G A P+A + +P + PP GF YP+
Sbjct: 11 PLPDSPPTDEGMSSSSAQPSAPSAPEQQPTSPSRPPPPAGFVYPS 55
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = +3
Query: 240 PGQNPQYGYQPGFAYGQQPTAMQYPNVN-PIQTAPPVGFGYPNVSPTPAFTP 392
P NP YQP Y QP A P P+ TA Y + P P P
Sbjct: 158 PHMNPSPYYQPRPNYVTQPPAPIIPPPQPPVMTASAAAAAYRDRLPPPPPKP 209
>AL021171-3|CAB54258.1| 749|Caenorhabditis elegans Hypothetical
protein H04D03.2b protein.
Length = 749
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 285 GQQPTAMQYPNVNPIQTAPPVGFGYPNVSPTPAFTP 392
GQ +++ N+NP +AP G P+ PT P
Sbjct: 450 GQNTGSLETENMNPASSAPARKRGKPSRDPTKPVAP 485
>AL021171-2|CAA15957.1| 747|Caenorhabditis elegans Hypothetical
protein H04D03.2a protein.
Length = 747
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 285 GQQPTAMQYPNVNPIQTAPPVGFGYPNVSPTPAFTP 392
GQ +++ N+NP +AP G P+ PT P
Sbjct: 450 GQNTGSLETENMNPASSAPARKRGKPSRDPTKPVAP 485
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/61 (32%), Positives = 23/61 (37%)
Frame = +3
Query: 162 YPQMYNQVNXXXXXXXXXXSQLSYPAPGQNPQYGYQPGFAYGQQPTAMQYPNVNPIQTAP 341
Y QMY+Q +Q PG P YGY P + G P Q P Q P
Sbjct: 172 YQQMYHQQRAQQQQAGQQQAQ---GPPGYGP-YGYAPQASTGYPPPPSQQSPYAP-QAGP 226
Query: 342 P 344
P
Sbjct: 227 P 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,357,498
Number of Sequences: 27780
Number of extensions: 279231
Number of successful extensions: 930
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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