Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_F12
(554 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132860-19|CAB60502.1| 159|Caenorhabditis elegans Hypothetical... 75 5e-14
AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin (... 29 2.2
AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical ... 28 3.9
Z68337-9|CAA92751.2| 334|Caenorhabditis elegans Hypothetical pr... 28 5.2
AC006748-1|AAF60514.2| 323|Caenorhabditis elegans Serpentine re... 28 5.2
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 27 6.9
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 27 6.9
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 27 6.9
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 27 6.9
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 27 6.9
>AL132860-19|CAB60502.1| 159|Caenorhabditis elegans Hypothetical
protein Y56A3A.21 protein.
Length = 159
Score = 74.5 bits (175), Expect = 5e-14
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Frame = +2
Query: 86 ILLTFAYISRGIAESCQNPKVEATSFTSLDATVVTQIAYITEFSLKCDNPLPENYALYAE 265
I + ++ + C++PK A+SF++ D + +ITEF+L+C N P+N AE
Sbjct: 4 IAVALCLVASALCAKCESPKYSASSFSTTDGFFHYKTTFITEFTLQCSNN-PKNIQYTAE 62
Query: 266 VDEKPLTAARVGEN-KYQVSWTEEPAKARSGVHEINILDEEGWASLRRARRSDPTATVAP 442
V+ + + + E K+QVSWT E A + INI DEEG A + P
Sbjct: 63 VNGRLIPVSISDETAKFQVSWTLEHKDAGAQTFNINIFDEEGAAQYAK------NPVTKP 116
Query: 443 LLAIQLHHPGSYSGPWVNSEVLATVMSI 526
L +Q H G + ++SE +A ++ +
Sbjct: 117 LFTVQQSHGGLATKSPISSETVAVIIVV 144
>AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin
(drosophila peroxidase)homolog protein 1 protein.
Length = 1285
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +2
Query: 209 EFSLKCDNPLPENYALYAEVDEKPLTAARVGENKYQVSWTEEPAK 343
E + C NP+ + EVD+ LT AR E SWT E K
Sbjct: 202 EKKVYCTNPVELRHQALDEVDDSALTCARPAEE----SWTGEEIK 242
>AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical
protein Y53G8AL.1 protein.
Length = 704
Score = 28.3 bits (60), Expect = 3.9
Identities = 19/71 (26%), Positives = 28/71 (39%)
Frame = +2
Query: 122 AESCQNPKVEATSFTSLDATVVTQIAYITEFSLKCDNPLPENYALYAEVDEKPLTAARVG 301
A+ QNP+++ SLD T+ I E S + EN E EK +
Sbjct: 276 AKPAQNPEIDLPEVPSLDLEETTENPEIPEISTPREEDSAENLENLVENSEKSEILEDLE 335
Query: 302 ENKYQVSWTEE 334
EN ++ E
Sbjct: 336 ENSKNLTENSE 346
>Z68337-9|CAA92751.2| 334|Caenorhabditis elegans Hypothetical
protein M7.13 protein.
Length = 334
Score = 27.9 bits (59), Expect = 5.2
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 74 IPIVILLTFAYISRGIAESCQNPKVEATSFTSLD 175
IP+ I+ TFA++ G+ C + + + +LD
Sbjct: 270 IPVTIIYTFAFMGHGMGTICGIASITISMYPALD 303
>AC006748-1|AAF60514.2| 323|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 66 protein.
Length = 323
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 394 VTPPRSSLRPDCHCCSITRYSTPSSW 471
+TP R+S+R C S+ R ST SW
Sbjct: 292 ITPYRNSIREFLECKSMPRGSTSGSW 317
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 420 TRLPLLLHYSLFNSIILAV-TLAPGLIQK 503
T +PLL+ Y LFN +I+++ + G++ K
Sbjct: 334 THVPLLVAYFLFNMVIVSIAAMTTGIVMK 362
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 420 TRLPLLLHYSLFNSIILAV-TLAPGLIQK 503
T +PLL+ Y LFN +I+++ + G++ K
Sbjct: 329 THVPLLVAYFLFNMVIVSIAAMTTGIVMK 357
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 420 TRLPLLLHYSLFNSIILAV-TLAPGLIQK 503
T +PLL+ Y LFN +I+++ + G++ K
Sbjct: 334 THVPLLVAYFLFNMVIVSIAAMTTGIVMK 362
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 420 TRLPLLLHYSLFNSIILAV-TLAPGLIQK 503
T +PLL+ Y LFN +I+++ + G++ K
Sbjct: 329 THVPLLVAYFLFNMVIVSIAAMTTGIVMK 357
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 420 TRLPLLLHYSLFNSIILAV-TLAPGLIQK 503
T +PLL+ Y LFN +I+++ + G++ K
Sbjct: 334 THVPLLVAYFLFNMVIVSIAAMTTGIVMK 362
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 420 TRLPLLLHYSLFNSIILAV-TLAPGLIQK 503
T +PLL+ Y LFN +I+++ + G++ K
Sbjct: 329 THVPLLVAYFLFNMVIVSIAAMTTGIVMK 357
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,721,792
Number of Sequences: 27780
Number of extensions: 272657
Number of successful extensions: 654
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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