Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_F09
         (470 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0678 - 5534879-5534883,5535430-5535529,5535638-5535799,553...    27   7.6  
03_06_0483 - 34226496-34226864,34227140-34227360,34227677-342279...    27   7.6  

>11_01_0678 -
           5534879-5534883,5535430-5535529,5535638-5535799,
           5536000-5536966,5537444-5537561,5538682-5538871,
           5538952-5539107,5539296-5540315
          Length = 905

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 276 LQVLYLCYSYMVYLHSYVFSKNCHFDSTKRHFN 374
           L+  +L +S    L    F+KNC FDS K+ F+
Sbjct: 197 LKDCFLNFSSCPALKELYFTKNCCFDSVKKIFS 229


>03_06_0483 -
           34226496-34226864,34227140-34227360,34227677-34227933,
           34228388-34228483,34228660-34228805,34229774-34229977
          Length = 430

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +1

Query: 316 YIHMYSVKIVILTVQRDTSILFISIVTT 399
           ++  + VK++ L V+  T +LF+S+ TT
Sbjct: 55  HLASFLVKVIALEVKLSTPLLFLSVTTT 82


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,077,928
Number of Sequences: 37544
Number of extensions: 141333
Number of successful extensions: 236
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)