Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_F09
(470 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067945-1|AAC17679.1| 312|Caenorhabditis elegans Serpentine re... 27 6.8
Z54327-12|CAD56557.1| 543|Caenorhabditis elegans Hypothetical p... 27 9.0
Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical p... 27 9.0
Z54307-8|CAD56577.1| 543|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z54307-5|CAD56575.1| 513|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z54307-4|CAD56574.1| 510|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z54307-3|CAD56573.1| 516|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z54307-2|CAD56572.1| 503|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z54307-1|CAA91092.2| 493|Caenorhabditis elegans Hypothetical pr... 27 9.0
>AF067945-1|AAC17679.1| 312|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 31 protein.
Length = 312
Score = 27.1 bits (57), Expect = 6.8
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +1
Query: 46 SRLRSRFIYSLCFNFLYGILFIFLKNIWY*K*KYF**IQALEYKSDY*IGFYSQFYFVTR 225
S L ++FIY +Y + +FL W YF + ++ + + Y FY +R
Sbjct: 4 SLLITQFIYGTISTIIYSLTVVFLTKNWKHFDNYFLKLYICQF--FFNMWMYWNFYITSR 61
Query: 226 IP 231
+P
Sbjct: 62 LP 63
>Z54327-12|CAD56557.1| 543|Caenorhabditis elegans Hypothetical
protein F14F11.1c protein.
Length = 543
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 277 FRYYICVTRIWYIYIHMYSVKIVILTVQRDTSILFISIVTTFISV 411
F ICV R++ + H +KI+I T + LF+ + +++
Sbjct: 348 FLSMICVLRLFKLTQHFSGLKILIQTFKASAQELFLLVFFVILAI 392
>Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 277 FRYYICVTRIWYIYIHMYSVKIVILTVQRDTSILFISIVTTFISV 411
F ICV R++ + H +KI+I T + LF+ + +++
Sbjct: 394 FLSMICVLRLFKLTQHFSGLKILIQTFKASAQELFLLVFFVILAI 438
>Z54307-8|CAD56577.1| 543|Caenorhabditis elegans Hypothetical
protein F14F11.1c protein.
Length = 543
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 277 FRYYICVTRIWYIYIHMYSVKIVILTVQRDTSILFISIVTTFISV 411
F ICV R++ + H +KI+I T + LF+ + +++
Sbjct: 348 FLSMICVLRLFKLTQHFSGLKILIQTFKASAQELFLLVFFVILAI 392
>Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 277 FRYYICVTRIWYIYIHMYSVKIVILTVQRDTSILFISIVTTFISV 411
F ICV R++ + H +KI+I T + LF+ + +++
Sbjct: 394 FLSMICVLRLFKLTQHFSGLKILIQTFKASAQELFLLVFFVILAI 438
>Z54307-5|CAD56575.1| 513|Caenorhabditis elegans Hypothetical
protein F14F11.1g protein.
Length = 513
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 277 FRYYICVTRIWYIYIHMYSVKIVILTVQRDTSILFISIVTTFISV 411
F ICV R++ + H +KI+I T + LF+ + +++
Sbjct: 318 FLSMICVLRLFKLTQHFSGLKILIQTFKASAQELFLLVFFVILAI 362
>Z54307-4|CAD56574.1| 510|Caenorhabditis elegans Hypothetical
protein F14F11.1f protein.
Length = 510
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 277 FRYYICVTRIWYIYIHMYSVKIVILTVQRDTSILFISIVTTFISV 411
F ICV R++ + H +KI+I T + LF+ + +++
Sbjct: 315 FLSMICVLRLFKLTQHFSGLKILIQTFKASAQELFLLVFFVILAI 359
>Z54307-3|CAD56573.1| 516|Caenorhabditis elegans Hypothetical
protein F14F11.1e protein.
Length = 516
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 277 FRYYICVTRIWYIYIHMYSVKIVILTVQRDTSILFISIVTTFISV 411
F ICV R++ + H +KI+I T + LF+ + +++
Sbjct: 321 FLSMICVLRLFKLTQHFSGLKILIQTFKASAQELFLLVFFVILAI 365
>Z54307-2|CAD56572.1| 503|Caenorhabditis elegans Hypothetical
protein F14F11.1d protein.
Length = 503
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 277 FRYYICVTRIWYIYIHMYSVKIVILTVQRDTSILFISIVTTFISV 411
F ICV R++ + H +KI+I T + LF+ + +++
Sbjct: 308 FLSMICVLRLFKLTQHFSGLKILIQTFKASAQELFLLVFFVILAI 352
>Z54307-1|CAA91092.2| 493|Caenorhabditis elegans Hypothetical
protein F14F11.1a protein.
Length = 493
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 277 FRYYICVTRIWYIYIHMYSVKIVILTVQRDTSILFISIVTTFISV 411
F ICV R++ + H +KI+I T + LF+ + +++
Sbjct: 298 FLSMICVLRLFKLTQHFSGLKILIQTFKASAQELFLLVFFVILAI 342
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,040,521
Number of Sequences: 27780
Number of extensions: 165125
Number of successful extensions: 352
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 352
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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