Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_F07
(495 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 27 0.14
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 1.0
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 1.8
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.4
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 23 2.4
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 23 2.4
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 22 3.1
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 22 3.1
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 3.1
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 22 3.1
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 4.1
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 4.1
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 9.5
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 26.6 bits (56), Expect = 0.14
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 215 ICTLLYYVPVPVAASHQAGSLALLSLAVWLTHEIKLL 325
+C L++Y+P G LLSL V+L K+L
Sbjct: 250 LCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKIL 286
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.8 bits (49), Expect = 1.0
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 25 EPVGAEPHGEPDDRAAGPQDPRHRHPDA 108
+P+ + +P A GPQ H+ P A
Sbjct: 6 QPIITQQSQQPSSGAPGPQPSPHQSPQA 33
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.0 bits (47), Expect = 1.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 150 DSGLPLESAHSAVASVRVPVP 88
++G +ESA S V VRV VP
Sbjct: 1180 EAGRGIESAKSYVVDVRVHVP 1200
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.6 bits (46), Expect = 2.4
Identities = 10/39 (25%), Positives = 16/39 (41%)
Frame = -1
Query: 351 SKYYLGMYLRSLISCVSHTASDSSASEPAWWLAATGTGT 235
+KY + + C++ T SA WL+ G T
Sbjct: 3 AKYVFTTLINAAFLCLASTILSESAGTSCKWLSEGGNDT 41
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 22.6 bits (46), Expect = 2.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 215 ICTLLYYVPVPVAASHQAGSLALLSLAVWL 304
+ L++YVP G ALLS+ V+L
Sbjct: 230 VALLVFYVPSESGEKVTLGISALLSMTVFL 259
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 22.6 bits (46), Expect = 2.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 32 WVRNLTENPTTVQLDHRI 85
W +N+TE PTT ++ +I
Sbjct: 293 WSQNITERPTTNEVITKI 310
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 22.2 bits (45), Expect = 3.1
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 4 RGGHPLAEPVGAEPHGEPDDRAAGPQDPRHRHPDAGDG 117
R P AEP P P R P+ R P+A G
Sbjct: 173 REAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 210
Score = 22.2 bits (45), Expect = 3.1
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 4 RGGHPLAEPVGAEPHGEPDDRAAGPQDPRHRHPDAGDG 117
R P AEP P P R P+ R P+A G
Sbjct: 201 REAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 238
Score = 21.8 bits (44), Expect = 4.1
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 4 RGGHPLAEPVGAEPHGEPDDRAAGPQDPRHRHPDAGDG 117
R P AEP P P R P+ R P+A G
Sbjct: 33 REAKPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 70
Score = 21.8 bits (44), Expect = 4.1
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 4 RGGHPLAEPVGAEPHGEPDDRAAGPQDPRHRHPDAGDG 117
R P AEP P P R P+ R P+A G
Sbjct: 229 REAEPEAEPGNNRPVYIPQPRPPHPRLRREAKPEAKPG 266
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 22.2 bits (45), Expect = 3.1
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 4 RGGHPLAEPVGAEPHGEPDDRAAGPQDPRHRHPDAGDG 117
R P AEP P P R P+ R P+A G
Sbjct: 34 REAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 71
Score = 22.2 bits (45), Expect = 3.1
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 4 RGGHPLAEPVGAEPHGEPDDRAAGPQDPRHRHPDAGDG 117
R P AEP P P R P+ R P+A G
Sbjct: 62 REAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 99
Score = 22.2 bits (45), Expect = 3.1
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 4 RGGHPLAEPVGAEPHGEPDDRAAGPQDPRHRHPDAGDG 117
R P AEP P P R P+ R P+A G
Sbjct: 90 REAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 127
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.2 bits (45), Expect = 3.1
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +1
Query: 25 EPVGAEPHGEPDDRAAGPQDPRHRHPD 105
EP+ + P DD GP P + H D
Sbjct: 473 EPLPSLPLPGADDDLFGPASPAYVHED 499
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 22.2 bits (45), Expect = 3.1
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 4 RGGHPLAEPVGAEPHGEPDDRAAGPQDPRHRHPDAGDG 117
R P AEP P P R P+ R P+A G
Sbjct: 33 REAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 70
Score = 22.2 bits (45), Expect = 3.1
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 4 RGGHPLAEPVGAEPHGEPDDRAAGPQDPRHRHPDAGDG 117
R P AEP P P R P+ R P+A G
Sbjct: 61 REAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 98
Score = 22.2 bits (45), Expect = 3.1
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 4 RGGHPLAEPVGAEPHGEPDDRAAGPQDPRHRHPDAGDG 117
R P AEP P P R P+ R P+A G
Sbjct: 89 REAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 126
Score = 21.8 bits (44), Expect = 4.1
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 4 RGGHPLAEPVGAEPHGEPDDRAAGPQDPRHRHPDAGDG 117
R P AEP P P R P+ R P+A G
Sbjct: 5 REAKPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 42
Score = 21.8 bits (44), Expect = 4.1
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 4 RGGHPLAEPVGAEPHGEPDDRAAGPQDPRHRHPDAGDG 117
R P AEP P P R P+ R P+A G
Sbjct: 117 REAEPEAEPGNNRPVYIPQPRPPHPRLRREAKPEAEPG 154
Score = 21.8 bits (44), Expect = 4.1
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 4 RGGHPLAEPVGAEPHGEPDDRAAGPQDPRHRHPDAGDG 117
R P AEP P P R P+ R P+A G
Sbjct: 145 REAKPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 182
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 306 VSHTASDSSASEPAWWLAATGTG 238
+ A S+ S+P WLA+ G G
Sbjct: 212 ILEAARRSNLSQPFQWLASDGWG 234
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 306 VSHTASDSSASEPAWWLAATGTG 238
+ A S+ S+P WLA+ G G
Sbjct: 302 ILEAARRSNLSQPFQWLASDGWG 324
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 20.6 bits (41), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 200 QVGLGICTLLYYV 238
Q GLGIC L YV
Sbjct: 101 QWGLGICKLRAYV 113
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,206
Number of Sequences: 438
Number of extensions: 2034
Number of successful extensions: 23
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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