Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_F06
(573 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 323 5e-89
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 323 5e-89
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 322 1e-88
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 319 9e-88
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 319 9e-88
03_01_0034 + 318432-318825,318902-319851 317 3e-87
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 299 1e-81
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 297 5e-81
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 174 4e-44
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 173 6e-44
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 172 1e-43
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 152 2e-37
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 134 5e-32
05_01_0300 + 2340251-2340791,2340892-2341325 31 0.86
09_04_0325 + 16689613-16689772,16690043-16690329 30 1.1
04_04_1351 - 32827136-32827984 29 2.6
01_06_0403 - 29060712-29060732,29061260-29061334,29061596-290617... 29 2.6
04_04_0950 + 29609484-29611025 29 3.5
02_05_0971 - 33188816-33188965,33190406-33190705,33191500-331915... 29 3.5
10_06_0172 + 11473892-11474896 28 4.6
08_01_0319 + 2848751-2848762,2849516-2850449,2850476-2851234,285... 28 4.6
03_01_0524 + 3943581-3943610,3943889-3944050,3944403-3944637,394... 28 6.1
01_07_0170 - 41670694-41671634,41672014-41672982,41673050-41673605 28 6.1
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 323 bits (794), Expect = 5e-89
Identities = 149/188 (79%), Positives = 161/188 (85%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
A+L++LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRK
Sbjct: 63 AVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
EAE+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSDTVVEP
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YNATLSVHQLVEN DE +DNEALYDICFRTLKL+TPT+GDLNHL+S TMSGVT CLRF
Sbjct: 183 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRF 242
Query: 550 PGQLNADL 573
PGQLN+DL
Sbjct: 243 PGQLNSDL 250
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 323 bits (794), Expect = 5e-89
Identities = 149/188 (79%), Positives = 161/188 (85%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
A+L++LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRK
Sbjct: 63 AVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
EAE+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSDTVVEP
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YNATLSVHQLVEN DE +DNEALYDICFRTLKL+TPT+GDLNHL+S TMSGVT CLRF
Sbjct: 183 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRF 242
Query: 550 PGQLNADL 573
PGQLN+DL
Sbjct: 243 PGQLNSDL 250
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 322 bits (791), Expect = 1e-88
Identities = 148/188 (78%), Positives = 161/188 (85%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
A+L++LEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRK
Sbjct: 63 AVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
EAE+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSDTVVEP
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YNATLSVHQLVEN DE +DNEALYDICFRTLKL+TPT+GDLNHL+S TMSGVT CLRF
Sbjct: 183 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRF 242
Query: 550 PGQLNADL 573
PGQLN+DL
Sbjct: 243 PGQLNSDL 250
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 319 bits (784), Expect = 9e-88
Identities = 146/188 (77%), Positives = 161/188 (85%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
A+L++LEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRK
Sbjct: 243 AVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 302
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
EAE+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSDTVVEP
Sbjct: 303 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 362
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRF
Sbjct: 363 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRF 422
Query: 550 PGQLNADL 573
PGQLN+DL
Sbjct: 423 PGQLNSDL 430
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 319 bits (784), Expect = 9e-88
Identities = 146/188 (77%), Positives = 161/188 (85%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
A+L++LEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRK
Sbjct: 63 AVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
EAE+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSDTVVEP
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRF
Sbjct: 183 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRF 242
Query: 550 PGQLNADL 573
PGQLN+DL
Sbjct: 243 PGQLNSDL 250
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 317 bits (779), Expect = 3e-87
Identities = 145/188 (77%), Positives = 160/188 (85%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
A+L++LEPGTMDSVRSGP+G IFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRK
Sbjct: 63 AVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRK 122
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
EAE+CDCLQGFQ KIREEYPDR+M T+SV PSPKVSDTVVEP
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRF
Sbjct: 183 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRF 242
Query: 550 PGQLNADL 573
PGQLN+DL
Sbjct: 243 PGQLNSDL 250
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 299 bits (733), Expect = 1e-81
Identities = 146/209 (69%), Positives = 161/209 (77%), Gaps = 21/209 (10%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
A+L++LEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRK
Sbjct: 63 AVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 190 EAESCDCLQG---------------------FQXXXXXXXXXXXXXXXXXXXKIREEYPD 306
EAE+CDCLQG FQ KIREEYPD
Sbjct: 123 EAENCDCLQGCRRLLEVHPLTCCESRNMMHGFQVCHSLGGGTGSGMGTLLISKIREEYPD 182
Query: 307 RIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPT 486
R+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP+
Sbjct: 183 RMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 242
Query: 487 YGDLNHLVSLTMSGVTTCLRFPGQLNADL 573
+GDLNHL+S TMSGVT CLRFPGQLN+DL
Sbjct: 243 FGDLNHLISATMSGVTCCLRFPGQLNSDL 271
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 297 bits (728), Expect = 5e-81
Identities = 144/204 (70%), Positives = 158/204 (77%), Gaps = 16/204 (7%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
A+L++LEPGTMDS+RSGP G IFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRK
Sbjct: 63 AVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 190 EAESCDCLQ----------------GFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNT 321
EAE+CDCLQ GFQ KIREEYPDR+M T
Sbjct: 123 EAENCDCLQDNRVIRQLGSIDNEQSGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLT 182
Query: 322 YSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 501
+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+ P++GDLN
Sbjct: 183 FSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLN 242
Query: 502 HLVSLTMSGVTTCLRFPGQLNADL 573
HL+S TMSGVT CLRFPGQLN+DL
Sbjct: 243 HLISATMSGVTCCLRFPGQLNSDL 266
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 174 bits (424), Expect = 4e-44
Identities = 82/188 (43%), Positives = 116/188 (61%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
AI V+LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK
Sbjct: 65 AIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRK 124
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
A++C LQGF ++ +Y + +++ PSP+VS VVEP
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEP 184
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S +S +TT LRF
Sbjct: 185 YNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRF 244
Query: 550 PGQLNADL 573
G +N D+
Sbjct: 245 DGAINVDV 252
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 173 bits (422), Expect = 6e-44
Identities = 82/188 (43%), Positives = 116/188 (61%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
A+ V+LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK
Sbjct: 65 AVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
A++C LQGF ++ +Y + ++V PSP+VS +VVEP
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEP 184
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS +S +T LRF
Sbjct: 185 YNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRF 244
Query: 550 PGQLNADL 573
G LN D+
Sbjct: 245 DGALNVDV 252
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 172 bits (419), Expect = 1e-43
Identities = 82/188 (43%), Positives = 116/188 (61%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
A+ V+LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK
Sbjct: 65 AVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
A++C LQGF ++ +Y + ++V PSP+VS +VVEP
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEP 184
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS +S +T LRF
Sbjct: 185 YNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRF 244
Query: 550 PGQLNADL 573
G LN D+
Sbjct: 245 DGALNVDV 252
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 152 bits (369), Expect = 2e-37
Identities = 79/209 (37%), Positives = 116/209 (55%), Gaps = 21/209 (10%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
A+ V+LEP +D V++GP+ Q+F P+ + + A NN+A+GHYT G E+VD LD +RK
Sbjct: 125 ALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLDRLRK 184
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP--------- 342
A++C LQGF ++ +Y + +++ PSP
Sbjct: 185 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTIYPSPQYFFMSSSC 244
Query: 343 ------------KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPT 486
K+S VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PT
Sbjct: 245 MHIMSDTQISQCKISTAVVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPT 304
Query: 487 YGDLNHLVSLTMSGVTTCLRFPGQLNADL 573
Y +LN L+S +S +TT LRF G +N D+
Sbjct: 305 YTNLNRLISQVISSLTTSLRFDGAINVDI 333
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 134 bits (324), Expect = 5e-32
Identities = 67/191 (35%), Positives = 106/191 (55%), Gaps = 3/191 (1%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 183
A+LV+LEP ++ +++ + ++ +N + GAGNNWA G Y +G ++VD ++D++
Sbjct: 64 ALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDMI 122
Query: 184 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP-KVSDTV 360
+EA+ D L+GF + + Y +++ TYSV P+ + SD V
Sbjct: 123 DREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVV 182
Query: 361 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTC 540
V+PYN+ L++ +L N D +DN AL I L L+ PT+ N LVS MS TT
Sbjct: 183 VQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTTT 242
Query: 541 LRFPGQLNADL 573
LR+PG +N DL
Sbjct: 243 LRYPGYMNNDL 253
>05_01_0300 + 2340251-2340791,2340892-2341325
Length = 324
Score = 30.7 bits (66), Expect = 0.86
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 453 LLPHAETIHTHIWRLEPPGVADHVWRYHLSQVPWSVECGS 572
LL H W L P +AD WR ++ W+ EC S
Sbjct: 253 LLIHHTKEELQRWGLSPEMIADQQWRASANRRSWADECSS 292
>09_04_0325 + 16689613-16689772,16690043-16690329
Length = 148
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/19 (73%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = +1
Query: 76 FRPDNFVFGQSGAGN-NWA 129
F PDNFVF QS AG NWA
Sbjct: 129 FNPDNFVFHQSVAGGINWA 147
>04_04_1351 - 32827136-32827984
Length = 282
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 116 PAPDCPKTKLSGRKICPKGPERTESM-VPGSSST 18
P+P PK + GRK CP P T S P SS T
Sbjct: 170 PSPSPPK-RHGGRKACPPSPTPTPSTPTPSSSDT 202
>01_06_0403 -
29060712-29060732,29061260-29061334,29061596-29061762,
29061841-29061996,29062412-29062535,29062949-29063047,
29063155-29063254,29063331-29063380,29063461-29063562,
29063709-29063786,29063865-29064131,29064225-29064321,
29064446-29064746,29066714-29066805,29066890-29067005,
29067445-29067519,29067846-29067911,29068206-29068262,
29068381-29068430,29068518-29068688,29068969-29069060,
29069124-29069281
Length = 837
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 95 TKLSGRKICPKGPERTESMVPGSSSTRMAP 6
+ + G+KIC P S +PG++ST AP
Sbjct: 641 SSVDGKKICYINPRHLTSKLPGNTSTSGAP 670
>04_04_0950 + 29609484-29611025
Length = 513
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -1
Query: 141 VVSLSPVVTGAGLSENEVVGAEDLSEGSRADRVHGAGLELDEDGAS 4
+VSL+ +G+G +E V G LS G+ A G G D D S
Sbjct: 16 IVSLAAADSGSGEAETTVPGQIRLSCGASASATDGDGRAWDGDAVS 61
>02_05_0971 -
33188816-33188965,33190406-33190705,33191500-33191562,
33191637-33191710,33191880-33191973,33193396-33193482,
33193753-33193887
Length = 300
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = -2
Query: 218 PCKQSHDSASLRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKG-PERTES 42
P K H A +T + + S S +PS P+A +P C G G P R
Sbjct: 179 PSKCYHTQAQSQTRTSSTSPSMSPSPPPPVATEAESPSCNGINKRGSSAMDSGKPPRASE 238
Query: 41 MVPGSSST 18
+ G S +
Sbjct: 239 VGSGQSQS 246
>10_06_0172 + 11473892-11474896
Length = 334
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -3
Query: 517 SATPGGSSRHMWVWIVSA-CGSRCHRGLH 434
S+ PGG + H+WV SA C RC H
Sbjct: 184 SSAPGGGAVHVWVGDASAQCPGRCAWPFH 212
>08_01_0319 +
2848751-2848762,2849516-2850449,2850476-2851234,
2851793-2851850,2851900-2852179
Length = 680
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 499 SSRHMWVWIVSACGSRCHRGLHCQYNKFHLCFLLTDVPKVWH 374
+ RH W+ ++ C +C +GL QY +LC + TD+ + H
Sbjct: 247 NKRHAWLISIAGC-LQC-KGLLDQYWCMNLCDMSTDITNLVH 286
>03_01_0524 +
3943581-3943610,3943889-3944050,3944403-3944637,
3945626-3945666,3946101-3946145,3947119-3947246,
3947446-3947554,3947641-3947694
Length = 267
Score = 27.9 bits (59), Expect = 6.1
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +1
Query: 52 RSGPFGQIFRPDNFVFGQSGAGNNWAKGH 138
++ P+ + +++ +G SGAGN ++ GH
Sbjct: 64 QANPYWAMMHTNSYKYGYSGAGNYYSYGH 92
>01_07_0170 - 41670694-41671634,41672014-41672982,41673050-41673605
Length = 821
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = -3
Query: 478 WIVSACGSRCHRGLHCQYNKFHLCFLLTDVPKVWHC 371
W V +RC L C++++ H F ++W C
Sbjct: 452 WNVETLRARCLNDLECEWSELHGLFRELRFVEMWRC 487
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.136 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,845,590
Number of Sequences: 37544
Number of extensions: 360206
Number of successful extensions: 1117
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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