Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_F06
(573 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 343 4e-95
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 343 5e-95
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 343 5e-95
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 341 2e-94
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 341 2e-94
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 341 2e-94
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 217 6e-57
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 217 6e-57
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 172 2e-43
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 172 2e-43
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 168 2e-42
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 168 3e-42
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 168 3e-42
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 166 9e-42
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 166 1e-41
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 166 1e-41
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 165 2e-41
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 165 2e-41
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 165 2e-41
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 165 2e-41
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 165 2e-41
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 160 7e-40
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 160 7e-40
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 157 4e-39
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 121 4e-28
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 121 4e-28
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 29 3.1
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 29 3.1
Z99281-31|CAI79273.1| 160|Caenorhabditis elegans Hypothetical p... 27 9.5
AF036704-2|ABA00183.1| 281|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 343 bits (844), Expect = 4e-95
Identities = 159/188 (84%), Positives = 167/188 (88%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
A LV+LEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRK
Sbjct: 63 ACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRK 122
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
EAESCDCLQGFQ KIREEYPDRIM T+SVVPSPKVSDTVVEP
Sbjct: 123 EAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVVEP 182
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YNATLSVHQLVENTDET+CIDNEALYDICFRTLKL+TPTYGDLNHLVS+TMSGVTTCLRF
Sbjct: 183 YNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMTMSGVTTCLRF 242
Query: 550 PGQLNADL 573
PGQLNADL
Sbjct: 243 PGQLNADL 250
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 343 bits (843), Expect = 5e-95
Identities = 158/188 (84%), Positives = 167/188 (88%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
A+LV+LEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRK 122
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
EAE CDCLQGFQ KIREEYPDRIM+++SVVPSPKVSDTVVEP
Sbjct: 123 EAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEP 182
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YNATLSVHQLVENTDET+CIDNEALYDICFRTLKLS PTYGDLNHLVS+TMSGVTTCLRF
Sbjct: 183 YNATLSVHQLVENTDETFCIDNEALYDICFRTLKLSNPTYGDLNHLVSVTMSGVTTCLRF 242
Query: 550 PGQLNADL 573
PGQLNADL
Sbjct: 243 PGQLNADL 250
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 343 bits (843), Expect = 5e-95
Identities = 157/188 (83%), Positives = 167/188 (88%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
A+LV+LEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+RK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRK 122
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
EAE CDCLQGFQ KIREEYPDRIM+++SVVPSPKVSDTVVEP
Sbjct: 123 EAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEP 182
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YNATLSVHQLVENTDETYCIDNEALYDIC+RTLKL+ PTYGDLNHLVSLTMSGVTTCLRF
Sbjct: 183 YNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTTCLRF 242
Query: 550 PGQLNADL 573
PGQLNADL
Sbjct: 243 PGQLNADL 250
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 341 bits (839), Expect = 2e-94
Identities = 156/188 (82%), Positives = 167/188 (88%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
A+LV+LEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+RK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRK 122
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
EAE CDCLQGFQ KIREE+PDRIM+++SVVPSPKVSDTVVEP
Sbjct: 123 EAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTVVEP 182
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YNATLSVHQLVENTDETYCIDNEALYDIC+RTLKL+ PTYGDLNHLVSLTMSGVTTCLRF
Sbjct: 183 YNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTTCLRF 242
Query: 550 PGQLNADL 573
PGQLNADL
Sbjct: 243 PGQLNADL 250
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 341 bits (838), Expect = 2e-94
Identities = 158/188 (84%), Positives = 166/188 (88%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
A+LV+LEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVRK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRK 122
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
EAES DCLQGFQ KIREEYPDRIMNT+SVVPSPKVSDTVVEP
Sbjct: 123 EAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEP 182
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YNATLSVHQLVENTD T+CIDNEALYDICFRTLKL+TPTYGDLNHLVS TMSGVTTCLRF
Sbjct: 183 YNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRF 242
Query: 550 PGQLNADL 573
PGQLNADL
Sbjct: 243 PGQLNADL 250
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 341 bits (838), Expect = 2e-94
Identities = 158/188 (84%), Positives = 166/188 (88%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
A+LV+LEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVRK
Sbjct: 63 AVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRK 122
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
EAES DCLQGFQ KIREEYPDRIMNT+SVVPSPKVSDTVVEP
Sbjct: 123 EAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEP 182
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YNATLSVHQLVENTD T+CIDNEALYDICFRTLKL+TPTYGDLNHLVS TMSGVTTCLRF
Sbjct: 183 YNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRF 242
Query: 550 PGQLNADL 573
PGQLNADL
Sbjct: 243 PGQLNADL 250
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 217 bits (529), Expect = 6e-57
Identities = 100/189 (52%), Positives = 135/189 (71%), Gaps = 1/189 (0%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
AILV+L+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+R+
Sbjct: 63 AILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRR 122
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
EAE+ D L+GFQ K+REEY D+ ++T S++PS KVSDTVVEP
Sbjct: 123 EAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEP 182
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKL-STPTYGDLNHLVSLTMSGVTTCLR 546
YNA LS+ L++N DE +CIDNEA++DIC LKL + TYGDLNHL SL +SG+TT R
Sbjct: 183 YNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALSGITTFQR 242
Query: 547 FPGQLNADL 573
F G L D+
Sbjct: 243 FKGNLKTDI 251
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 217 bits (529), Expect = 6e-57
Identities = 100/189 (52%), Positives = 135/189 (71%), Gaps = 1/189 (0%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
AILV+L+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+R+
Sbjct: 63 AILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRR 122
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
EAE+ D L+GFQ K+REEY D+ ++T S++PS KVSDTVVEP
Sbjct: 123 EAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEP 182
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKL-STPTYGDLNHLVSLTMSGVTTCLR 546
YNA LS+ L++N DE +CIDNEA++DIC LKL + TYGDLNHL SL +SG+TT R
Sbjct: 183 YNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALSGITTFQR 242
Query: 547 FPGQLNADL 573
F G L D+
Sbjct: 243 FKGNLKTDI 251
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 172 bits (418), Expect = 2e-43
Identities = 74/188 (39%), Positives = 119/188 (63%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
+I V+LEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD +R+
Sbjct: 62 SIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRR 121
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
A +C+ LQGF ++ EY + +S+ P+P++S +VVEP
Sbjct: 122 LANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSVVEP 181
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YN+ L+ H +E++D ++ +DNEA+YDIC R L++S PTY +LN ++S +S +T LRF
Sbjct: 182 YNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLRVSRPTYNNLNRIISQVVSSITASLRF 241
Query: 550 PGQLNADL 573
G LN DL
Sbjct: 242 DGALNVDL 249
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 172 bits (418), Expect = 2e-43
Identities = 77/188 (40%), Positives = 117/188 (62%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
AI V+LEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 68 AIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRK 127
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
+ E+C+ LQGF ++ E+ + +SV P+P+VS +VVEP
Sbjct: 128 QTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSVVEP 187
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YN+ L+ H +E +D ++ +DNEA+YD+C + L + P+Y +LN L++ +S +T LRF
Sbjct: 188 YNSILTTHTTLELSDCSFMVDNEAIYDLCRQKLHVERPSYSNLNRLIAQVVSSITASLRF 247
Query: 550 PGQLNADL 573
G LN DL
Sbjct: 248 DGALNVDL 255
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 168 bits (409), Expect = 2e-42
Identities = 74/188 (39%), Positives = 116/188 (61%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
+I V+LEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
A++C LQGF ++ +Y + +S+ P+P+VS VVEP
Sbjct: 123 LADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEP 182
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN ++S +S +T LRF
Sbjct: 183 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIISQVVSSITASLRF 242
Query: 550 PGQLNADL 573
G LN DL
Sbjct: 243 DGALNVDL 250
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 168 bits (408), Expect = 3e-42
Identities = 74/188 (39%), Positives = 116/188 (61%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
+I V+LEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
A++C LQGF ++ +Y + +S+ P+P+VS VVEP
Sbjct: 123 LADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEP 182
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN ++S +S +T LRF
Sbjct: 183 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQVVSSITASLRF 242
Query: 550 PGQLNADL 573
G LN DL
Sbjct: 243 DGALNVDL 250
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 168 bits (408), Expect = 3e-42
Identities = 74/188 (39%), Positives = 116/188 (61%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
+I V+LEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
A++C LQGF ++ +Y + +S+ P+P+VS VVEP
Sbjct: 123 LADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEP 182
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN ++S +S +T LRF
Sbjct: 183 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQVVSSITASLRF 242
Query: 550 PGQLNADL 573
G LN DL
Sbjct: 243 DGALNVDL 250
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 166 bits (404), Expect = 9e-42
Identities = 73/188 (38%), Positives = 115/188 (61%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
+I V+LEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+
Sbjct: 63 SIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRR 122
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
A++C LQGF ++ +Y + +S+ P+P+V VVEP
Sbjct: 123 LADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTAVVEP 182
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN ++S +S +T LRF
Sbjct: 183 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIISQVVSSITASLRF 242
Query: 550 PGQLNADL 573
G LN DL
Sbjct: 243 DGALNVDL 250
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 166 bits (403), Expect = 1e-41
Identities = 73/188 (38%), Positives = 115/188 (61%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
+I V+LEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +R+
Sbjct: 63 SIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRR 122
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
A++C LQGF ++ +Y + +S+ P+P+VS VVEP
Sbjct: 123 LADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEP 182
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN ++S +S +T LRF
Sbjct: 183 YNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQVVSSITASLRF 242
Query: 550 PGQLNADL 573
G LN DL
Sbjct: 243 DGALNVDL 250
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 166 bits (403), Expect = 1e-41
Identities = 73/188 (38%), Positives = 115/188 (61%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
+I V+LEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +R+
Sbjct: 63 SIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRR 122
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
A++C LQGF ++ +Y + +S+ P+P+VS VVEP
Sbjct: 123 LADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEP 182
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN ++S +S +T LRF
Sbjct: 183 YNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQVVSSITASLRF 242
Query: 550 PGQLNADL 573
G LN DL
Sbjct: 243 DGALNVDL 250
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 165 bits (401), Expect = 2e-41
Identities = 72/188 (38%), Positives = 114/188 (60%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
A++V+LEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+
Sbjct: 65 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 124
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
A++C LQGF ++ +Y + +S+ P+P+VS VVEP
Sbjct: 125 LADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEP 184
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YN+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +LN L+ +S +T LRF
Sbjct: 185 YNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRF 244
Query: 550 PGQLNADL 573
G LN DL
Sbjct: 245 DGALNVDL 252
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 165 bits (401), Expect = 2e-41
Identities = 75/188 (39%), Positives = 116/188 (61%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
AI+V+LEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V+D VR+
Sbjct: 70 AIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRR 129
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
E+C LQGF ++ +Y + + + P+P+VS ++VEP
Sbjct: 130 LVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVSTSMVEP 189
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YN+ L+ H +E++D ++ +DNEA+YDIC R L L+ PTY +LN L++ +S VT LRF
Sbjct: 190 YNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDLARPTYTNLNRLIAQVISSVTASLRF 249
Query: 550 PGQLNADL 573
G LN DL
Sbjct: 250 DGALNVDL 257
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 165 bits (401), Expect = 2e-41
Identities = 72/188 (38%), Positives = 114/188 (60%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
A++V+LEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+
Sbjct: 64 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 123
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
A++C LQGF ++ +Y + +S+ P+P+VS VVEP
Sbjct: 124 LADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEP 183
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YN+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +LN L+ +S +T LRF
Sbjct: 184 YNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRF 243
Query: 550 PGQLNADL 573
G LN DL
Sbjct: 244 DGALNVDL 251
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 165 bits (401), Expect = 2e-41
Identities = 72/188 (38%), Positives = 114/188 (60%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
A++V+LEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+
Sbjct: 65 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 124
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
A++C LQGF ++ +Y + +S+ P+P+VS VVEP
Sbjct: 125 LADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEP 184
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YN+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +LN L+ +S +T LRF
Sbjct: 185 YNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRF 244
Query: 550 PGQLNADL 573
G LN DL
Sbjct: 245 DGALNVDL 252
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 165 bits (401), Expect = 2e-41
Identities = 72/188 (38%), Positives = 114/188 (60%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
A++V+LEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+
Sbjct: 65 AVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRR 124
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
A++C LQGF ++ +Y + +S+ P+P+VS VVEP
Sbjct: 125 LADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEP 184
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YN+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +LN L+ +S +T LRF
Sbjct: 185 YNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRF 244
Query: 550 PGQLNADL 573
G LN DL
Sbjct: 245 DGALNVDL 252
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 160 bits (388), Expect = 7e-40
Identities = 74/187 (39%), Positives = 114/187 (60%)
Frame = +1
Query: 13 ILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 192
+ V+LEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D V++
Sbjct: 72 LFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRL 131
Query: 193 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPY 372
AE+C+ LQGF ++ EY + +++ P+P+VS ++VEPY
Sbjct: 132 AENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPY 191
Query: 373 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFP 552
N+ L H +E++D T+ +DNEA+YDIC R L L+ PTY +LN LV+ +S +T LRF
Sbjct: 192 NSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSITASLRFE 251
Query: 553 GQLNADL 573
G LN DL
Sbjct: 252 GALNVDL 258
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 160 bits (388), Expect = 7e-40
Identities = 74/187 (39%), Positives = 114/187 (60%)
Frame = +1
Query: 13 ILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 192
+ V+LEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D V++
Sbjct: 44 LFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRL 103
Query: 193 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPY 372
AE+C+ LQGF ++ EY + +++ P+P+VS ++VEPY
Sbjct: 104 AENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPY 163
Query: 373 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFP 552
N+ L H +E++D T+ +DNEA+YDIC R L L+ PTY +LN LV+ +S +T LRF
Sbjct: 164 NSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSITASLRFE 223
Query: 553 GQLNADL 573
G LN DL
Sbjct: 224 GALNVDL 230
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 157 bits (382), Expect = 4e-39
Identities = 72/188 (38%), Positives = 113/188 (60%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 189
AI V+LEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D VR+
Sbjct: 65 AIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRR 124
Query: 190 EAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 369
E C LQGF ++ +Y + +S+ P+P++S ++VEP
Sbjct: 125 LTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTSMVEP 184
Query: 370 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 549
YN+ L+ H +E++D ++ +DNEA+Y+I L + +PTY LN L++ +S +T LRF
Sbjct: 185 YNSLLTTHTTLEHSDCSFIMDNEAIYEITKVNLGVRSPTYTHLNRLLAQVVSSITASLRF 244
Query: 550 PGQLNADL 573
G LN DL
Sbjct: 245 DGALNVDL 252
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 121 bits (291), Expect = 4e-28
Identities = 64/184 (34%), Positives = 96/184 (52%), Gaps = 4/184 (2%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 180
A+LV+LEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D+
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 181 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVS-DT 357
+ +EAE+ + L G ++RE +P +++ TYSV + S D
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 358 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 537
VV PYN LS+ +L+EN D +DN AL+ + K TPT+ +N LV+ MS T
Sbjct: 184 VVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTA 243
Query: 538 CLRF 549
RF
Sbjct: 244 PYRF 247
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 121 bits (291), Expect = 4e-28
Identities = 64/184 (34%), Positives = 96/184 (52%), Gaps = 4/184 (2%)
Frame = +1
Query: 10 AILVELEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 180
A+LV+LEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D+
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 181 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVS-DT 357
+ +EAE+ + L G ++RE +P +++ TYSV + S D
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 358 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTT 537
VV PYN LS+ +L+EN D +DN AL+ + K TPT+ +N LV+ MS T
Sbjct: 184 VVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTA 243
Query: 538 CLRF 549
RF
Sbjct: 244 PYRF 247
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 28.7 bits (61), Expect = 3.1
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = -2
Query: 206 SHDSASLRTTSKTESTSSAPSV*CPLAQLL-----PAPDCPKTKLSGRKICPKGPERTES 42
S A R + + S SS+PS CP LL PAP P + G PK +
Sbjct: 294 SDGRAGSRISLASTSASSSPSDPCPSPPLLPPVCPPAPPPPPPPIGGLTSPPKDALKNVP 353
Query: 41 MVPGSSST 18
PG+ T
Sbjct: 354 EPPGNMKT 361
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = -2
Query: 221 NPCKQSHDSASLRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKGPERTES 42
NP + S+S +T + T++T +PS ++Q P T ++ + + + + +
Sbjct: 390 NPTTTAQLSSSSKTLTSTQTTQGSPST---VSQTTPGVSSASTGMTTSQASLRSTQNSVT 446
Query: 41 MVPGSSSTRMAP 6
PGS + P
Sbjct: 447 STPGSFTVTSTP 458
>Z99281-31|CAI79273.1| 160|Caenorhabditis elegans Hypothetical
protein Y57G11C.51 protein.
Length = 160
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 59 DPSDRSSAPTTSFSDSPAPVTTGLRDTTRK 148
DPS SS+ ++S S SP+ +T L T R+
Sbjct: 123 DPSTPSSSTSSSTSSSPSSSSTPLTSTQRR 152
>AF036704-2|ABA00183.1| 281|Caenorhabditis elegans Hypothetical
protein ZK185.4 protein.
Length = 281
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 207 LFTRIPTHTLPRRRYWLRYGHPSHL*NTRRIPRQNHEHI 323
+F IP L W+RYG NT R+ + H H+
Sbjct: 87 IFFHIPFRLLELSVGWVRYGRLESRANTHRLWYKMHRHL 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.136 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,758,169
Number of Sequences: 27780
Number of extensions: 295619
Number of successful extensions: 950
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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