Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_F05
(607 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0103 + 1082077-1082167,1083037-1085477 309 1e-84
02_04_0017 + 18937774-18937864,18938505-18940945 309 1e-84
01_06_0662 + 30987187-30987277,30987825-30990214 306 9e-84
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 264 3e-71
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 208 3e-54
03_05_0511 + 25056018-25059107 79 3e-15
02_04_0148 - 20198407-20201424 76 2e-14
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 42 3e-04
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 38 0.008
10_01_0230 - 2433082-2434674 30 1.6
07_01_0468 + 3537669-3537890,3539003-3539130,3539398-3539621,353... 30 1.6
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 29 2.2
01_02_0022 + 10290033-10290407,10290497-10290848,10290923-102910... 29 2.2
01_01_1190 + 9463973-9465732,9466210-9466440,9467664-9467793,946... 28 5.0
11_06_0282 - 21884702-21885085 28 6.6
07_03_0698 - 20765305-20768526 28 6.6
01_05_0175 - 18936752-18937621,18938855-18941641 28 6.6
10_08_0621 + 19328357-19329545,19329967-19329986 27 8.7
03_05_1048 - 29950860-29951396,29951810-29952676 27 8.7
02_05_0263 - 27257150-27259213 27 8.7
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 309 bits (758), Expect = 1e-84
Identities = 138/199 (69%), Positives = 168/199 (84%)
Frame = +3
Query: 9 KSPNKHNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARKIWCFG 188
KSPNKHNRL+M+A+P+ EGL E IDDG++ PRDD K R++ LS+++ +D A+KIWCFG
Sbjct: 579 KSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFG 638
Query: 189 PEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGAMAEENLRGVRFNIYDVTLHTDA 368
PE TGPN++VD KGVQYLNEIKDSVVAGFQWA+KEGA+AEEN+RG+ F + DV LH DA
Sbjct: 639 PETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADA 698
Query: 369 IHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE 548
IHRGGGQ+IPT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIYGVLN++RGHVFEE
Sbjct: 699 IHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEE 758
Query: 549 SQVAGTPMFVVKAYLPVNE 605
Q GTP++ +KAYLPV E
Sbjct: 759 MQRPGTPLYNIKAYLPVIE 777
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 309 bits (758), Expect = 1e-84
Identities = 138/199 (69%), Positives = 168/199 (84%)
Frame = +3
Query: 9 KSPNKHNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARKIWCFG 188
KSPNKHNRL+M+A+P+ EGL E IDDG++ PRDD K R++ LS+++ +D A+KIWCFG
Sbjct: 579 KSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFG 638
Query: 189 PEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGAMAEENLRGVRFNIYDVTLHTDA 368
PE TGPN++VD KGVQYLNEIKDSVVAGFQWA+KEGA+AEEN+RG+ F + DV LH DA
Sbjct: 639 PETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADA 698
Query: 369 IHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE 548
IHRGGGQ+IPT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIYGVLN++RGHVFEE
Sbjct: 699 IHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEE 758
Query: 549 SQVAGTPMFVVKAYLPVNE 605
Q GTP++ +KAYLPV E
Sbjct: 759 MQRPGTPLYNIKAYLPVIE 777
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 306 bits (751), Expect = 9e-84
Identities = 140/201 (69%), Positives = 169/201 (84%), Gaps = 2/201 (0%)
Frame = +3
Query: 9 KSPNKHNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARKIWCFG 188
KSPNKHNRL+M+A+PM EGLPE ID+G++ PRDD K R++ LS+++ +D A+KIWCFG
Sbjct: 575 KSPNKHNRLYMEARPMEEGLPEAIDEGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFG 634
Query: 189 PEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGAMAEENL--RGVRFNIYDVTLHT 362
PE TGPNI+VD KGVQYLNEIKDSVVAGFQWA+KEGA+AEEN+ RG+ F + DV LH+
Sbjct: 635 PETTGPNIVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGRGICFEVCDVILHS 694
Query: 363 DAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 542
DAIHRGGGQIIPT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIY VLN++RGHVF
Sbjct: 695 DAIHRGGGQIIPTARRVIYAAQLTAKPRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVF 754
Query: 543 EESQVAGTPMFVVKAYLPVNE 605
EE Q GTP++ +KAYLPV E
Sbjct: 755 EEMQRPGTPLYNIKAYLPVIE 775
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 264 bits (648), Expect = 3e-71
Identities = 124/205 (60%), Positives = 157/205 (76%), Gaps = 8/205 (3%)
Frame = +3
Query: 9 KSPNKHNRLFMKAQPMP-EGLPED-------IDDGKVNPRDDFKTRARYLSDKYEYDLTE 164
KSPNKHNRL+M+A+P+ E L +D IDD ++ P+DD K R + LS+++ +D
Sbjct: 581 KSPNKHNRLYMEARPLDKEDLQQDEPSLCKAIDDERIGPKDDIKERGKILSEEFGWDKDL 640
Query: 165 ARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGAMAEENLRGVRFNIY 344
A+KIW FGPE GPN+LVD KGVQYL+EIKDSVVAGFQWA+KEGA+AEEN+RGV F +
Sbjct: 641 AKKIWAFGPETKGPNLLVDMCKGVQYLSEIKDSVVAGFQWASKEGALAEENMRGVCFELC 700
Query: 345 DVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNR 524
DVTLH+D+IHRGGGQ+IPT RR +YA LTA PRLMEP+Y +IQ P+ AVG +YGVLN
Sbjct: 701 DVTLHSDSIHRGGGQLIPTARRAMYAAQLTASPRLMEPMYQVDIQVPKTAVGNVYGVLNS 760
Query: 525 RRGHVFEESQVAGTPMFVVKAYLPV 599
R G + EES+ GTP+ ++ YLPV
Sbjct: 761 RNGELVEESERTGTPLSNLRFYLPV 785
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 208 bits (507), Expect = 3e-54
Identities = 99/203 (48%), Positives = 135/203 (66%), Gaps = 4/203 (1%)
Frame = +3
Query: 9 KSPNKHNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARKIWCFG 188
++PNK N++ M A+P+ +GL EDI++G V+ K + +Y++D+ AR IW FG
Sbjct: 701 ETPNKRNKITMVAEPLEKGLAEDIENGLVSLDSRQKEITDFFRQRYQWDVLAARSIWAFG 760
Query: 189 PEGTGPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKEGAMAEENLRGVRFNIYDVTL 356
PE GPNIL+D + V+ LN +KDS+V GFQW A+EG + +E +R V+F I + +
Sbjct: 761 PEKQGPNILLDDTLSVEVDKNLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKILNANI 820
Query: 357 HTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGH 536
+ +HRGGGQIIPT RR +Y+ L A PRLMEPVY EIQ P V IY VL+RRRGH
Sbjct: 821 APEPLHRGGGQIIPTARRVVYSAFLMANPRLMEPVYYIEIQTPIDCVSAIYTVLSRRRGH 880
Query: 537 VFEESQVAGTPMFVVKAYLPVNE 605
V + GTP++VVKA+LPV E
Sbjct: 881 VTADVPKPGTPIYVVKAFLPVIE 903
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 79.0 bits (186), Expect = 3e-15
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
Frame = +3
Query: 252 IKDSVVAGFQWAAKEGAMAEENLRGVRFNI--YDVTLHTDAIHRG------GGQIIPTTR 407
+++ +V+GFQ A G + +E + G+ F + Y H+DA + GQ+I +
Sbjct: 815 LRNCIVSGFQLATNAGPLCDEPMWGLVFVVEPYIFCDHSDAANHSEQYNIFSGQVITAVK 874
Query: 408 RCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKA 587
++ +PRL+E +Y CE+ P +G Y VL+R+R V +E GT +F V A
Sbjct: 875 EACREAVVQNKPRLVEAMYFCELTTPTEQLGATYAVLSRKRARVLKEEMQEGTSLFTVHA 934
Query: 588 YLPVNE 605
YLPV E
Sbjct: 935 YLPVAE 940
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 76.2 bits (179), Expect = 2e-14
Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Frame = +3
Query: 252 IKDSVVAGFQWAAKEGAMAEENLRGVRFNIYDVTL---------HTDAIHRGGGQIIPTT 404
+K+S+ GFQ A G + E G+ F + L +D GQII
Sbjct: 790 VKNSIATGFQLATNAGPLCGEPTWGLIFLVKPYILPDSADASNNQSDHYSTFSGQIITAV 849
Query: 405 RRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVK 584
R A +L ++PRL+EP+Y CE+ P +G +Y VL R V +E GT +F V
Sbjct: 850 REACQAAILESKPRLVEPMYFCELTTPTEQLGSMYAVLGNCRARVLKEEMQEGTSLFTVH 909
Query: 585 AYLPVNE 605
AYL V E
Sbjct: 910 AYLSVAE 916
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 42.3 bits (95), Expect = 3e-04
Identities = 37/126 (29%), Positives = 54/126 (42%)
Frame = +3
Query: 228 KGVQYLNEIKDSVVAGFQWAAKEGAMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTR 407
KG E V+ G + + G +A + +R + D + H QI R
Sbjct: 580 KGGAVPKEYVPGVMKGIEESLPNGVLAGYPVVDLRAVLVDGSYHDVDSSVLAFQI--AAR 637
Query: 408 RCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKA 587
L A PRL+EP+ E+ PE +G + G LN RRG V G + VV A
Sbjct: 638 GAFREGLRKAGPRLLEPIMKVEVITPEEHLGDVIGDLNSRRGQVNSFGDKPG-GLKVVDA 696
Query: 588 YLPVNE 605
++P+ E
Sbjct: 697 FVPLAE 702
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 37.5 bits (83), Expect = 0.008
Identities = 26/114 (22%), Positives = 49/114 (42%)
Frame = +3
Query: 261 SVVAGFQWAAKEGAMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQ 440
++ GF+ A G++ + +R + D H A+ + C A+
Sbjct: 613 AIEKGFKEACNSGSLIGHPVENIRIVLTDGASH--AVDSSELAFKLASIYAFRQCYAAAR 670
Query: 441 PRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVN 602
P ++EPV E++ P G + G +N+R+G + Q VV ++P+N
Sbjct: 671 PVILEPVMKVELKVPTEFQGTVTGDMNKRKGIIVGNDQEGDDT--VVVCHVPLN 722
>10_01_0230 - 2433082-2434674
Length = 530
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/81 (25%), Positives = 32/81 (39%)
Frame = +3
Query: 99 PRDDFKTRARYLSDKYEYDLTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGF 278
PR+ R D D+T R+I P G G I +L ++VA F
Sbjct: 434 PREFLPERFMAGGDGEGVDITGTREIRMM-PFGAGRRICPGLGVATLHLEYFVANMVAAF 492
Query: 279 QWAAKEGAMAEENLRGVRFNI 341
+W A EG + + + F +
Sbjct: 493 EWRAAEGEAVDVDGEKLEFTV 513
>07_01_0468 +
3537669-3537890,3539003-3539130,3539398-3539621,
3539660-3540062,3540398-3540473
Length = 350
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/48 (43%), Positives = 24/48 (50%)
Frame = -3
Query: 227 RAVDEDVRSGALGAEAPDLTRFGQIVLVLVAEVTGAGLEVVTGVHFAV 84
RA+DED AL E DL R + LVLV E G G+ G F V
Sbjct: 160 RAIDEDELLDALDGE--DLERAHEQALVLVHEAGGIGVGHADGKVFGV 205
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 432 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFE 545
T +L EP + ++ PE +G + +L +RRG + +
Sbjct: 497 TVDGKLQEPYEIAAVEVPEEYMGSVVELLGKRRGQMVD 534
>01_02_0022 +
10290033-10290407,10290497-10290848,10290923-10291070,
10291145-10291225,10291651-10291822,10292120-10292158,
10292384-10292543,10292676-10292779,10292979-10293278
Length = 576
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = -3
Query: 395 NDLTATSVNGVSVKGDVINVESNPSQVLLGHGAFLGGPLEPGDDRVLDLVQVLHTLRAVD 216
+D T +K D++ + N + +L G P +PGD DL+ + LRA
Sbjct: 118 SDPVLTMAVDSGLKDDLVFGDPNAPRFVLWEGKLRPVPSKPGDLPFFDLMSIPGKLRA-- 175
Query: 215 EDVRSGALGAEAP 177
GALG AP
Sbjct: 176 ---GLGALGVRAP 185
>01_01_1190 +
9463973-9465732,9466210-9466440,9467664-9467793,
9468723-9468888,9469528-9469859,9470284-9470513,
9471535-9471613,9471689-9471865
Length = 1034
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 407 EMPVRVSVDRAAQAYGTRVPLRDPVSGGGG 496
++PVR V R A A G+R P GGGG
Sbjct: 68 DIPVRHGVRRGAGAAGSRAPSGFVFGGGGG 97
>11_06_0282 - 21884702-21885085
Length = 127
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 75 DIDDGKVNPRDDFKTRARYLSDKYEYDLTEARK 173
++D G V+P DDF ++ Y+ + DL RK
Sbjct: 43 EVDAGVVDPDDDFYYKSLYVLHESSKDLRHVRK 75
>07_03_0698 - 20765305-20768526
Length = 1073
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +3
Query: 318 LRGVRFNIYDVTLHTDAIHRG----GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQ 479
L G + ++ D+ L D +HRG ++ P +L P+L+E +++C I+
Sbjct: 870 LSGTKASLIDLFLQVDKLHRGLLSLSIRMDPPGNWDAIDAILLRPPKLLESLHICSIR 927
>01_05_0175 - 18936752-18937621,18938855-18941641
Length = 1218
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -3
Query: 386 TATSVNGVSVK-GDVINVESNPSQVLLGHGAFLGGP-LEPGDDRVLDLVQVLHTLRAVD 216
T S+N VK G + ++V+LG P L PGD R+L+ V V VD
Sbjct: 809 TVPSLNSYFVKHGSRFSSTDKNTEVILGTVVIAKNPCLHPGDVRILEAVDVPELHHLVD 867
>10_08_0621 + 19328357-19329545,19329967-19329986
Length = 402
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +3
Query: 153 DLTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGAMAE 311
D+T +R+I P G G I + GV +L S+V F+W G E
Sbjct: 322 DVTGSREIRMM-PFGAGRRICAGLNVGVMHLEYFVGSMVMEFEWKEVAGDEVE 373
>03_05_1048 - 29950860-29951396,29951810-29952676
Length = 467
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 411 CLYACLLTAQPRLMEPVYLCEIQCPEVAVG 500
C C+LTA PR+M +L E ++ VG
Sbjct: 77 CGRRCVLTANPRMMVEAFLKEYLGADIVVG 106
>02_05_0263 - 27257150-27259213
Length = 687
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 461 HGFHKPGLRGQQTRVQASPSRWNDLTAT 378
HG KPG+ + V A +WN+ T T
Sbjct: 634 HGPQKPGIYALISEVYAQEGQWNEFTNT 661
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,607,360
Number of Sequences: 37544
Number of extensions: 381962
Number of successful extensions: 1456
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1449
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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