Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_F04
         (500 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   3.3  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   4.4  
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    23   7.7  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    23   7.7  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -3

Query: 288 HAHIETLARTHR*LTRSSPRSLQAVAACRETSTHAR-RSTLP 166
           HA I  +  + R   R SPRS     +CR      R RST P
Sbjct: 244 HASIRKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTRP 285


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +1

Query: 322 DVNPRHCTRLFNRSRDYINR-RNENNYLSCNY 414
           D+   +C  ++NR R YI     E  +  C+Y
Sbjct: 741 DIETVYCKLMYNRERSYIPLIEAEPKHFLCSY 772


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
 Frame = +3

Query: 180 GGRVSTSLDTRPP---PAATAGSCESATDESW 266
           G  V  SL++  P   P+ TAG+CE   + S+
Sbjct: 18  GATVGQSLNSGDPCQTPSGTAGTCEPVKNCSY 49


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 256 SVADSQLPAVAAGGGRVSRDVDTRPPLHAST 164
           S + S+ PA+  GG ++   +     LHA T
Sbjct: 82  SFSSSKEPALVVGGSKLQEALKVAGELHAYT 112


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 404,342
Number of Sequences: 2352
Number of extensions: 7184
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)