Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0007_F04
         (500 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   4.1  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    21   5.5  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    21   5.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   7.2  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   7.2  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = +2

Query: 422 CQNKLSNFWYYK*QINTFYNKKEMKK 499
           CQN+++ +W+     N  ++K+ + K
Sbjct: 359 CQNEMNKWWWNMKISNLSFDKQSLLK 384


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 479 YKTYLFVTYNTRNSIIYFDNY 417
           YK   +  YN  N  +Y+ NY
Sbjct: 89  YKYSNYNNYNNYNKKLYYKNY 109


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -1

Query: 479 YKTYLFVTYNTRNSIIYFDNY 417
           Y  Y    YN  N  +Y+ NY
Sbjct: 330 YNNYNNNNYNNYNKKLYYKNY 350


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 482 YYKTYLFVTYNTRNSIIYF 426
           Y   YL   YN  N +IYF
Sbjct: 205 YSGWYLNHDYNLENKLIYF 223


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +1

Query: 328 NPRHCTRLFNRSRDYINRRNENNYLSCNY 414
           NPR C  L     +    RN    ++C Y
Sbjct: 191 NPRPCNVLATSLTEPYTLRNYGRRINCTY 219


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,352
Number of Sequences: 438
Number of extensions: 1844
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)