Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_F03
(569 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 210 2e-54
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 210 2e-54
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 210 2e-54
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 210 2e-54
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 132 8e-31
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 105 8e-23
X96484-1|CAA65339.1| 84|Homo sapiens DGCR6 protein. 58 2e-08
CR542133-1|CAG46930.1| 84|Homo sapiens DGCR6 protein. 58 2e-08
CR456434-1|CAG30320.1| 220|Homo sapiens DGCR6 protein. 58 2e-08
BC047039-1|AAH47039.1| 220|Homo sapiens DiGeorge syndrome criti... 58 2e-08
AF228707-1|AAK15584.1| 220|Homo sapiens DiGeorge syndrome criti... 58 2e-08
CR456361-1|CAG30247.1| 220|Homo sapiens Em:AC007663.3 protein. 58 2e-08
BC000682-1|AAH00682.1| 220|Homo sapiens DiGeorge syndrome criti... 58 2e-08
AF228708-1|AAK15585.1| 220|Homo sapiens DiGeorge syndrome criti... 58 2e-08
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 46 9e-05
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 46 9e-05
BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein ... 32 1.6
BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein ... 32 1.6
AK024429-1|BAB15719.1| 1430|Homo sapiens FLJ00018 protein protein. 30 6.6
Y08982-1|CAA70171.1| 1530|Homo sapiens synaptonemal complex late... 29 8.7
BC146798-1|AAI46799.1| 792|Homo sapiens Unknown (protein for IM... 29 8.7
BC132870-1|AAI32871.1| 1530|Homo sapiens synaptonemal complex pr... 29 8.7
BC132864-1|AAI32865.1| 1530|Homo sapiens synaptonemal complex pr... 29 8.7
BC040566-1|AAH40566.1| 1024|Homo sapiens SYCP2 protein protein. 29 8.7
AL158092-3|CAM28338.1| 1023|Homo sapiens synaptonemal complex pr... 29 8.7
AL158092-2|CAC36022.2| 1530|Homo sapiens synaptonemal complex pr... 29 8.7
AL109928-10|CAM28269.1| 1023|Homo sapiens synaptonemal complex p... 29 8.7
AL109928-9|CAI21795.1| 1530|Homo sapiens synaptonemal complex pr... 29 8.7
AL080226-1|CAB45780.1| 520|Homo sapiens hypothetical protein pr... 29 8.7
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 210 bits (514), Expect = 2e-54
Identities = 95/121 (78%), Positives = 114/121 (94%)
Frame = +1
Query: 205 PRAGTRVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSG 384
P +VFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 385 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIQDILVQYDRSLLVADPR 564
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEI+DIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 565 R 567
R
Sbjct: 126 R 126
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 210 bits (514), Expect = 2e-54
Identities = 95/121 (78%), Positives = 114/121 (94%)
Frame = +1
Query: 205 PRAGTRVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSG 384
P +VFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 385 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIQDILVQYDRSLLVADPR 564
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEI+DIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 565 R 567
R
Sbjct: 126 R 126
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 210 bits (514), Expect = 2e-54
Identities = 95/121 (78%), Positives = 114/121 (94%)
Frame = +1
Query: 205 PRAGTRVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSG 384
P +VFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 385 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIQDILVQYDRSLLVADPR 564
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEI+DIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 565 R 567
R
Sbjct: 126 R 126
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 210 bits (514), Expect = 2e-54
Identities = 95/121 (78%), Positives = 114/121 (94%)
Frame = +1
Query: 205 PRAGTRVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSG 384
P +VFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 385 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIQDILVQYDRSLLVADPR 564
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEI+DIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 565 R 567
R
Sbjct: 126 R 126
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 132 bits (319), Expect = 8e-31
Identities = 58/83 (69%), Positives = 72/83 (86%)
Frame = +1
Query: 205 PRAGTRVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSG 384
P +VFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 385 VDIRVTVKGGGHVAQVYAIRQAI 453
VDIRV VKGGGHVAQ+Y Q +
Sbjct: 66 VDIRVRVKGGGHVAQIYGESQEL 88
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 105 bits (253), Expect = 8e-23
Identities = 54/104 (51%), Positives = 72/104 (69%)
Frame = +1
Query: 220 RVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRV 399
++F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ +G+DI V
Sbjct: 22 QIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGMDIHV 81
Query: 400 TVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIQDILVQ 531
VKG GHV Q+YA+ Q ISKAL+ Y KYVDEAS +EI+D L +
Sbjct: 82 RVKGSGHVVQIYAVLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
>X96484-1|CAA65339.1| 84|Homo sapiens DGCR6 protein.
Length = 84
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/50 (52%), Positives = 39/50 (78%)
Frame = -2
Query: 208 EELVMQLDQKVSDQQVLLEKAGVPGFFVTNKPIEVKVQMYLLDFILRLSK 59
+++V++LD+KV+DQQ LEKAGV GF+VT P E+ +QM LL+ I +L +
Sbjct: 3 QKIVLELDRKVADQQSTLEKAGVAGFYVTTNPQELMLQMNLLELIRKLQQ 52
>CR542133-1|CAG46930.1| 84|Homo sapiens DGCR6 protein.
Length = 84
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/50 (52%), Positives = 39/50 (78%)
Frame = -2
Query: 208 EELVMQLDQKVSDQQVLLEKAGVPGFFVTNKPIEVKVQMYLLDFILRLSK 59
+++V++LD+KV+DQQ LEKAGV GF+VT P E+ +QM LL+ I +L +
Sbjct: 3 QKIVLELDRKVADQQSTLEKAGVAGFYVTTNPQELMLQMNLLELIRKLQQ 52
>CR456434-1|CAG30320.1| 220|Homo sapiens DGCR6 protein.
Length = 220
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/50 (52%), Positives = 39/50 (78%)
Frame = -2
Query: 208 EELVMQLDQKVSDQQVLLEKAGVPGFFVTNKPIEVKVQMYLLDFILRLSK 59
+++V++LD+KV+DQQ LEKAGV GF+VT P E+ +QM LL+ I +L +
Sbjct: 139 QKIVLELDRKVADQQSTLEKAGVAGFYVTTNPQELMLQMNLLELIRKLQQ 188
>BC047039-1|AAH47039.1| 220|Homo sapiens DiGeorge syndrome critical
region gene 6 protein.
Length = 220
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/50 (52%), Positives = 39/50 (78%)
Frame = -2
Query: 208 EELVMQLDQKVSDQQVLLEKAGVPGFFVTNKPIEVKVQMYLLDFILRLSK 59
+++V++LD+KV+DQQ LEKAGV GF+VT P E+ +QM LL+ I +L +
Sbjct: 139 QKIVLELDRKVADQQSTLEKAGVAGFYVTTNPQELMLQMNLLELIRKLQQ 188
>AF228707-1|AAK15584.1| 220|Homo sapiens DiGeorge syndrome critical
region 6 protein protein.
Length = 220
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/50 (52%), Positives = 39/50 (78%)
Frame = -2
Query: 208 EELVMQLDQKVSDQQVLLEKAGVPGFFVTNKPIEVKVQMYLLDFILRLSK 59
+++V++LD+KV+DQQ LEKAGV GF+VT P E+ +QM LL+ I +L +
Sbjct: 139 QKIVLELDRKVADQQSTLEKAGVAGFYVTTNPQELMLQMNLLELIRKLQQ 188
>CR456361-1|CAG30247.1| 220|Homo sapiens Em:AC007663.3 protein.
Length = 220
Score = 58.0 bits (134), Expect = 2e-08
Identities = 25/50 (50%), Positives = 39/50 (78%)
Frame = -2
Query: 208 EELVMQLDQKVSDQQVLLEKAGVPGFFVTNKPIEVKVQMYLLDFILRLSK 59
++++++LD+KV+DQQ LEKAGV GF+VT P E+ +QM LL+ I +L +
Sbjct: 139 QKIILELDRKVADQQSTLEKAGVAGFYVTTNPQELMLQMNLLELIRKLQQ 188
>BC000682-1|AAH00682.1| 220|Homo sapiens DiGeorge syndrome critical
region gene 6-like protein.
Length = 220
Score = 58.0 bits (134), Expect = 2e-08
Identities = 25/50 (50%), Positives = 39/50 (78%)
Frame = -2
Query: 208 EELVMQLDQKVSDQQVLLEKAGVPGFFVTNKPIEVKVQMYLLDFILRLSK 59
++++++LD+KV+DQQ LEKAGV GF+VT P E+ +QM LL+ I +L +
Sbjct: 139 QKIILELDRKVADQQSTLEKAGVAGFYVTTNPQELMLQMNLLELIRKLQQ 188
>AF228708-1|AAK15585.1| 220|Homo sapiens DiGeorge syndrome critical
region 6-like protein protein.
Length = 220
Score = 58.0 bits (134), Expect = 2e-08
Identities = 25/50 (50%), Positives = 39/50 (78%)
Frame = -2
Query: 208 EELVMQLDQKVSDQQVLLEKAGVPGFFVTNKPIEVKVQMYLLDFILRLSK 59
++++++LD+KV+DQQ LEKAGV GF+VT P E+ +QM LL+ I +L +
Sbjct: 139 QKIILELDRKVADQQSTLEKAGVAGFYVTTNPQELMLQMNLLELIRKLQQ 188
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 46.0 bits (104), Expect = 9e-05
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 229 GRKKTATAVAYC-KRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTV 405
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 406 KGGGHVAQVYAIRQAISKALIAF 474
GGG AQ AIR A++KAL +F
Sbjct: 333 SGGGRSAQAGAIRLAMAKALCSF 355
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 46.0 bits (104), Expect = 9e-05
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 229 GRKKTATAVAYC-KRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTV 405
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 180 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 238
Query: 406 KGGGHVAQVYAIRQAISKALIAF 474
GGG AQ AIR A++KAL +F
Sbjct: 239 SGGGRSAQAGAIRLAMAKALCSF 261
>BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 31.9 bits (69), Expect = 1.6
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 316 EPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 492
+P L K EP L +KF +D+R + + H+ V+ + I + L +YQ +VD
Sbjct: 42 KPPFLLEKSMEPSLKYINKKFPNIDVRNSTQ---HLGPVHREKAEIIRFLTNYYQSFVD 97
>BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 31.9 bits (69), Expect = 1.6
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 316 EPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 492
+P L K EP L +KF +D+R + + H+ V+ + I + L +YQ +VD
Sbjct: 42 KPPFLLEKSMEPSLKYINKKFPNIDVRNSTQ---HLGPVHREKAEIIRFLTNYYQSFVD 97
>AK024429-1|BAB15719.1| 1430|Homo sapiens FLJ00018 protein protein.
Length = 1430
Score = 29.9 bits (64), Expect = 6.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 237 ENCNCGSILQTRTWSVACKWTPPRPGRTQTSSVQTTGT 350
E C+CG++ +TRT A PR G ++S+ T G+
Sbjct: 68 EVCDCGTVCETRTAPAAPTMASPR-GSGSSTSLSTVGS 104
>Y08982-1|CAA70171.1| 1530|Homo sapiens synaptonemal complex lateral
element protein protein.
Length = 1530
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 427 QVYAIRQAISKALIAFYQKYVDEASKKEIQDILVQYDRSLLVAD 558
Q+Y+I SK L+ K + SK+E +++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC146798-1|AAI46799.1| 792|Homo sapiens Unknown (protein for
IMAGE:8860302) protein.
Length = 792
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 427 QVYAIRQAISKALIAFYQKYVDEASKKEIQDILVQYDRSLLVAD 558
Q+Y+I SK L+ K + SK+E +++L+ +D SL + +
Sbjct: 338 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 381
>BC132870-1|AAI32871.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 427 QVYAIRQAISKALIAFYQKYVDEASKKEIQDILVQYDRSLLVAD 558
Q+Y+I SK L+ K + SK+E +++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC132864-1|AAI32865.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 427 QVYAIRQAISKALIAFYQKYVDEASKKEIQDILVQYDRSLLVAD 558
Q+Y+I SK L+ K + SK+E +++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC040566-1|AAH40566.1| 1024|Homo sapiens SYCP2 protein protein.
Length = 1024
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 427 QVYAIRQAISKALIAFYQKYVDEASKKEIQDILVQYDRSLLVAD 558
Q+Y+I SK L+ K + SK+E +++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL158092-3|CAM28338.1| 1023|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1023
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 427 QVYAIRQAISKALIAFYQKYVDEASKKEIQDILVQYDRSLLVAD 558
Q+Y+I SK L+ K + SK+E +++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL158092-2|CAC36022.2| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 427 QVYAIRQAISKALIAFYQKYVDEASKKEIQDILVQYDRSLLVAD 558
Q+Y+I SK L+ K + SK+E +++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL109928-10|CAM28269.1| 1023|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1023
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 427 QVYAIRQAISKALIAFYQKYVDEASKKEIQDILVQYDRSLLVAD 558
Q+Y+I SK L+ K + SK+E +++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL109928-9|CAI21795.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 427 QVYAIRQAISKALIAFYQKYVDEASKKEIQDILVQYDRSLLVAD 558
Q+Y+I SK L+ K + SK+E +++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL080226-1|CAB45780.1| 520|Homo sapiens hypothetical protein
protein.
Length = 520
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 427 QVYAIRQAISKALIAFYQKYVDEASKKEIQDILVQYDRSLLVAD 558
Q+Y+I SK L+ K + SK+E +++L+ +D SL + +
Sbjct: 61 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 104
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,531,360
Number of Sequences: 237096
Number of extensions: 1905411
Number of successful extensions: 4673
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4671
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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