Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_F01
(482 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00040-3|AAM22033.1| 638|Caenorhabditis elegans Hypothetical pr... 37 0.007
U50071-6|AAQ91911.1| 1004|Caenorhabditis elegans Uncoordinated p... 33 0.11
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 33 0.11
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 33 0.11
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 33 0.11
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 33 0.11
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 33 0.11
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 33 0.11
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 33 0.11
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 33 0.11
U52001-1|AAA96093.1| 656|Caenorhabditis elegans Feminization of... 31 0.58
J03172-1|AAA28055.1| 656|Caenorhabditis elegans protein ( C.ele... 31 0.58
AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical... 31 0.58
AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical... 31 0.58
AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical... 31 0.58
AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam... 31 0.58
AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gam... 31 0.58
Z81465-3|CAC42253.4| 800|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z79754-3|CAB02092.1| 297|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z54271-4|CAA91034.1| 259|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical pr... 28 3.1
AF045645-3|AAC02610.2| 193|Caenorhabditis elegans Hypothetical ... 28 3.1
Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr... 28 4.1
M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele... 28 4.1
Z93383-8|CAB07629.1| 286|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z82055-3|CAB04845.1| 385|Caenorhabditis elegans Hypothetical pr... 27 5.4
AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical ... 27 5.4
Z93383-10|CAB07632.1| 286|Caenorhabditis elegans Hypothetical p... 27 7.1
AF239999-1|AAF63495.1| 203|Caenorhabditis elegans MDF-2 protein. 27 7.1
AF000266-9|AAC71169.1| 566|Caenorhabditis elegans Hypothetical ... 27 7.1
AC084158-32|AAM15619.1| 116|Caenorhabditis elegans Mad (yeast m... 27 7.1
AC084158-31|AAK68576.1| 203|Caenorhabditis elegans Mad (yeast m... 27 7.1
AC024882-2|AAF60935.2| 344|Caenorhabditis elegans Seven tm rece... 27 7.1
U58755-8|AAB00697.1| 169|Caenorhabditis elegans Cyclophylin pro... 27 9.4
AF078790-4|AAC26932.1| 311|Caenorhabditis elegans Hypothetical ... 27 9.4
AF068713-3|AAC17793.1| 286|Caenorhabditis elegans Serpentine re... 27 9.4
AF016418-5|AAK18900.1| 278|Caenorhabditis elegans Hypothetical ... 27 9.4
>U00040-3|AAM22033.1| 638|Caenorhabditis elegans Hypothetical
protein C18H2.3 protein.
Length = 638
Score = 37.1 bits (82), Expect = 0.007
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +3
Query: 315 KSLEENLFEAIRNEDHVSITQFILQGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
K E L A+R + +FI +GA G T L A LG++E++E+LI
Sbjct: 299 KDGENGLLGAVRESNKAHALKFIKKGAFINAYNHHGNTLLHSATKLGKVELVEILI 354
>U50071-6|AAQ91911.1| 1004|Caenorhabditis elegans Uncoordinated
protein 44, isoform g protein.
Length = 1004
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 354 EDHVSITQFILQ-GANPTKTTRTGKTCLGEAANLGRIEIIELL 479
+ H + +++L+ GA+P + T TG+T L A LG + ++E L
Sbjct: 765 QGHNNCVRYLLENGASPNEQTATGQTPLSIAQRLGYVSVVETL 807
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 363 VSITQFIL-QGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
++I ++L QGANP T G+T L AA + +++ +LI
Sbjct: 438 INIVIYLLQQGANPDVETVRGETPLHLAARANQTDVVRVLI 478
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 360 HVSITQFIL-QGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
HV + + +L + A+P G T L A RI+++ELL+
Sbjct: 371 HVRVAKLLLDRSADPNSRALNGFTPLHIACKKNRIKVVELLL 412
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 354 EDHVSITQFILQ-GANPTKTTRTGKTCLGEAANLGRIEIIELL 479
+ H + +++L+ GA+P + T TG+T L A LG + ++E L
Sbjct: 765 QGHNNCVRYLLENGASPNEQTATGQTPLSIAQRLGYVSVVETL 807
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 363 VSITQFIL-QGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
++I ++L QGANP T G+T L AA + +++ +LI
Sbjct: 438 INIVIYLLQQGANPDVETVRGETPLHLAARANQTDVVRVLI 478
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 360 HVSITQFIL-QGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
HV + + +L + A+P G T L A RI+++ELL+
Sbjct: 371 HVRVAKLLLDRSADPNSRALNGFTPLHIACKKNRIKVVELLL 412
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 354 EDHVSITQFILQ-GANPTKTTRTGKTCLGEAANLGRIEIIELL 479
+ H + +++L+ GA+P + T TG+T L A LG + ++E L
Sbjct: 765 QGHNNCVRYLLENGASPNEQTATGQTPLSIAQRLGYVSVVETL 807
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 363 VSITQFIL-QGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
++I ++L QGANP T G+T L AA + +++ +LI
Sbjct: 438 INIVIYLLQQGANPDVETVRGETPLHLAARANQTDVVRVLI 478
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 360 HVSITQFIL-QGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
HV + + +L + A+P G T L A RI+++ELL+
Sbjct: 371 HVRVAKLLLDRSADPNSRALNGFTPLHIACKKNRIKVVELLL 412
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 354 EDHVSITQFILQ-GANPTKTTRTGKTCLGEAANLGRIEIIELL 479
+ H + +++L+ GA+P + T TG+T L A LG + ++E L
Sbjct: 765 QGHNNCVRYLLENGASPNEQTATGQTPLSIAQRLGYVSVVETL 807
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 363 VSITQFIL-QGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
++I ++L QGANP T G+T L AA + +++ +LI
Sbjct: 438 INIVIYLLQQGANPDVETVRGETPLHLAARANQTDVVRVLI 478
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 360 HVSITQFIL-QGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
HV + + +L + A+P G T L A RI+++ELL+
Sbjct: 371 HVRVAKLLLDRSADPNSRALNGFTPLHIACKKNRIKVVELLL 412
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 354 EDHVSITQFILQ-GANPTKTTRTGKTCLGEAANLGRIEIIELL 479
+ H + +++L+ GA+P + T TG+T L A LG + ++E L
Sbjct: 765 QGHNNCVRYLLENGASPNEQTATGQTPLSIAQRLGYVSVVETL 807
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 363 VSITQFIL-QGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
++I ++L QGANP T G+T L AA + +++ +LI
Sbjct: 438 INIVIYLLQQGANPDVETVRGETPLHLAARANQTDVVRVLI 478
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 360 HVSITQFIL-QGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
HV + + +L + A+P G T L A RI+++ELL+
Sbjct: 371 HVRVAKLLLDRSADPNSRALNGFTPLHIACKKNRIKVVELLL 412
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 354 EDHVSITQFILQ-GANPTKTTRTGKTCLGEAANLGRIEIIELL 479
+ H + +++L+ GA+P + T TG+T L A LG + ++E L
Sbjct: 765 QGHNNCVRYLLENGASPNEQTATGQTPLSIAQRLGYVSVVETL 807
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 363 VSITQFIL-QGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
++I ++L QGANP T G+T L AA + +++ +LI
Sbjct: 438 INIVIYLLQQGANPDVETVRGETPLHLAARANQTDVVRVLI 478
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 360 HVSITQFIL-QGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
HV + + +L + A+P G T L A RI+++ELL+
Sbjct: 371 HVRVAKLLLDRSADPNSRALNGFTPLHIACKKNRIKVVELLL 412
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 354 EDHVSITQFILQ-GANPTKTTRTGKTCLGEAANLGRIEIIELL 479
+ H + +++L+ GA+P + T TG+T L A LG + ++E L
Sbjct: 765 QGHNNCVRYLLENGASPNEQTATGQTPLSIAQRLGYVSVVETL 807
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 363 VSITQFIL-QGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
++I ++L QGANP T G+T L AA + +++ +LI
Sbjct: 438 INIVIYLLQQGANPDVETVRGETPLHLAARANQTDVVRVLI 478
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 360 HVSITQFIL-QGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
HV + + +L + A+P G T L A RI+++ELL+
Sbjct: 371 HVRVAKLLLDRSADPNSRALNGFTPLHIACKKNRIKVVELLL 412
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 354 EDHVSITQFILQ-GANPTKTTRTGKTCLGEAANLGRIEIIELL 479
+ H + +++L+ GA+P + T TG+T L A LG + ++E L
Sbjct: 765 QGHNNCVRYLLENGASPNEQTATGQTPLSIAQRLGYVSVVETL 807
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 363 VSITQFIL-QGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
++I ++L QGANP T G+T L AA + +++ +LI
Sbjct: 438 INIVIYLLQQGANPDVETVRGETPLHLAARANQTDVVRVLI 478
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 360 HVSITQFIL-QGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
HV + + +L + A+P G T L A RI+++ELL+
Sbjct: 371 HVRVAKLLLDRSADPNSRALNGFTPLHIACKKNRIKVVELLL 412
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 354 EDHVSITQFILQ-GANPTKTTRTGKTCLGEAANLGRIEIIELL 479
+ H + +++L+ GA+P + T TG+T L A LG + ++E L
Sbjct: 765 QGHNNCVRYLLENGASPNEQTATGQTPLSIAQRLGYVSVVETL 807
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 363 VSITQFIL-QGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
++I ++L QGANP T G+T L AA + +++ +LI
Sbjct: 438 INIVIYLLQQGANPDVETVRGETPLHLAARANQTDVVRVLI 478
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 360 HVSITQFIL-QGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
HV + + +L + A+P G T L A RI+++ELL+
Sbjct: 371 HVRVAKLLLDRSADPNSRALNGFTPLHIACKKNRIKVVELLL 412
>U52001-1|AAA96093.1| 656|Caenorhabditis elegans Feminization of xx
and xo animalsprotein 1, isoform a protein.
Length = 656
Score = 30.7 bits (66), Expect = 0.58
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 354 EDHVSITQFILQ-GANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
+ H+ I +++L+ GA+P R G TCL A+ ++ I+E L+
Sbjct: 133 DGHLDIVKYLLEKGADPHIPNRHGHTCLMIASYRNKVGIVEELL 176
>J03172-1|AAA28055.1| 656|Caenorhabditis elegans protein (
C.elegans fem-1 gene,complete cds. ).
Length = 656
Score = 30.7 bits (66), Expect = 0.58
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 354 EDHVSITQFILQ-GANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
+ H+ I +++L+ GA+P R G TCL A+ ++ I+E L+
Sbjct: 133 DGHLDIVKYLLEKGADPHIPNRHGHTCLMIASYRNKVGIVEELL 176
>AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical
protein Y39A1A.15c protein.
Length = 903
Score = 30.7 bits (66), Expect = 0.58
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +3
Query: 333 LFEAIRNEDHVSITQFILQGANPTK---TTRTGKTCLGEAANLGRIEIIELLI 482
L A+ D +S+ + G + + TT+ G+T L AA++G +E+ +LLI
Sbjct: 745 LISAVLARDVMSLNVLLANGMSVEEINTTTKDGRTVLHLAASIGSVELAQLLI 797
>AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical
protein Y39A1A.15b protein.
Length = 951
Score = 30.7 bits (66), Expect = 0.58
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +3
Query: 333 LFEAIRNEDHVSITQFILQGANPTK---TTRTGKTCLGEAANLGRIEIIELLI 482
L A+ D +S+ + G + + TT+ G+T L AA++G +E+ +LLI
Sbjct: 793 LISAVLARDVMSLNVLLANGMSVEEINTTTKDGRTVLHLAASIGSVELAQLLI 845
>AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical
protein Y39A1A.15a protein.
Length = 1107
Score = 30.7 bits (66), Expect = 0.58
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +3
Query: 333 LFEAIRNEDHVSITQFILQGANPTK---TTRTGKTCLGEAANLGRIEIIELLI 482
L A+ D +S+ + G + + TT+ G+T L AA++G +E+ +LLI
Sbjct: 949 LISAVLARDVMSLNVLLANGMSVEEINTTTKDGRTVLHLAASIGSVELAQLLI 1001
>AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma 1B
protein.
Length = 1107
Score = 30.7 bits (66), Expect = 0.58
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +3
Query: 333 LFEAIRNEDHVSITQFILQGANPTK---TTRTGKTCLGEAANLGRIEIIELLI 482
L A+ D +S+ + G + + TT+ G+T L AA++G +E+ +LLI
Sbjct: 949 LISAVLARDVMSLNVLLANGMSVEEINTTTKDGRTVLHLAASIGSVELAQLLI 1001
>AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gamma
1A protein.
Length = 952
Score = 30.7 bits (66), Expect = 0.58
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +3
Query: 333 LFEAIRNEDHVSITQFILQGANPTK---TTRTGKTCLGEAANLGRIEIIELLI 482
L A+ D +S+ + G + + TT+ G+T L AA++G +E+ +LLI
Sbjct: 794 LISAVLARDVMSLNVLLANGMSVEEINTTTKDGRTVLHLAASIGSVELAQLLI 846
>Z81465-3|CAC42253.4| 800|Caenorhabditis elegans Hypothetical
protein C09F9.3 protein.
Length = 800
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 342 AIRNEDHVSITQFILQGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
A +N D S+ + +QGA+ +T L AA GRI++ + LI
Sbjct: 508 AAKNGDLDSLRRMFMQGADLKTADYDNRTALHVAAAEGRIKVCKFLI 554
>Z79754-3|CAB02092.1| 297|Caenorhabditis elegans Hypothetical
protein F25H2.3 protein.
Length = 297
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +3
Query: 312 DKSLEENLFEAIRNEDHVSITQFILQGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
+K E+ L A + ++ I + + +GANP T TC A + E + +L+
Sbjct: 52 NKQGEDRLMRACKVDNPFEIIKLLNEGANPNATDHAKNTCSSTAVLNMQPENVRILL 108
>Z54271-4|CAA91034.1| 259|Caenorhabditis elegans Hypothetical
protein F21D5.4 protein.
Length = 259
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 312 DKSLEENLFEAIRNEDHVSITQFILQGANPTKTTRTGKTCLGEAAN 449
DK+LEE+LFE I +++ +I++ + G G+T L N
Sbjct: 158 DKTLEESLFELINSDEWKNISEGNVSGFLEDFNAENGETSLKVEGN 203
>Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical
protein ZK1053.4 protein.
Length = 667
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -2
Query: 142 SINQFQNLL*LQKCDLLEMLTRLNIIIPIYNTYVTLECELL 20
S+N +N L L CD + T N +IP Y+ Y C+ +
Sbjct: 478 SLNDDENELNLHVCDCCKTGTTENDLIPKYSEYCAKTCKYI 518
>AF045645-3|AAC02610.2| 193|Caenorhabditis elegans Hypothetical
protein K02D7.2 protein.
Length = 193
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 319 HLKKIYLKPSVMKIMFQLHSLYC 387
H KK+Y P +K+ + HSL C
Sbjct: 74 HCKKVYRSPGALKMHLKTHSLPC 96
>Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical protein
R107.8 protein.
Length = 1429
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 387 QGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
+G+N K GKT + AA GRIE++ LI
Sbjct: 1230 KGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLI 1261
>M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.elegans
homeotic lin-12 protein gene, complete cds. ).
Length = 1429
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 387 QGANPTKTTRTGKTCLGEAANLGRIEIIELLI 482
+G+N K GKT + AA GRIE++ LI
Sbjct: 1230 KGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLI 1261
>Z93383-8|CAB07629.1| 286|Caenorhabditis elegans Hypothetical
protein F54B8.9 protein.
Length = 286
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -3
Query: 306 LQATVICRIVYFTLLVIVLFENIHIKLFPYLFLHH 202
L T+IC + TL+ ++ F+ + LFP + +H
Sbjct: 85 LWPTLICATMRVTLVFLISFDRLMASLFPISYHNH 119
>Z82055-3|CAB04845.1| 385|Caenorhabditis elegans Hypothetical
protein T26H2.3 protein.
Length = 385
Score = 27.5 bits (58), Expect = 5.4
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = +3
Query: 195 QLNDVKINMEIILYEYFQIKLLQEE*NIQSYKLPWLEVMDKSLEENLFEAIRNEDHVSIT 374
QLND+ I L+ +K+L + ++ + W++ ++ LE L R+ D ++
Sbjct: 245 QLNDILIMNSEHLHLSSDLKVLSMK-DLNLFLKCWMKGSNRKLEY-LTVYGRHGDGSNVE 302
Query: 375 QFILQGANPTKTTRTGKTCLGEAANLGRI 461
+L G N + +T CL NLG I
Sbjct: 303 D-VLSGINHLEIPKTRSICLHLTRNLGNI 330
>AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical
protein Y71A12B.4 protein.
Length = 1913
Score = 27.5 bits (58), Expect = 5.4
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 300 LEVMDKSLEENLFEAIRNEDHVSITQ-FILQGANPTKTTRTGKTCLGEAANLGRIEIIEL 476
+ VMD++ L A R H+S+ + FI A+P T+ GK L AA IE +
Sbjct: 1252 INVMDQNGWTGLHFATR-AGHLSVVKLFIDSSADPLAETKEGKVPLCFAAAHNHIECLRF 1310
Query: 477 LI 482
L+
Sbjct: 1311 LL 1312
>Z93383-10|CAB07632.1| 286|Caenorhabditis elegans Hypothetical
protein F54B8.11 protein.
Length = 286
Score = 27.1 bits (57), Expect = 7.1
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -3
Query: 306 LQATVICRIVYFTLLVIVLFENIHIKLFPYLFLHHSTGM---VLQCTLSCQFTF 154
LQA++I IV T+ +++ E FP +F ++ + ++ C + C F F
Sbjct: 85 LQASLIMGIVRATIALLLTLERFIAVFFPIIFHNNRRKIPIFLIICPILCHFLF 138
>AF239999-1|AAF63495.1| 203|Caenorhabditis elegans MDF-2 protein.
Length = 203
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 298 GLKLWINHLKKI--YLKPSVMKIMFQLHSLYCKELIQLKQLVLEKHV 432
GL LW+ H KK+ ++ P + ++ + L K L+ + V K V
Sbjct: 49 GLTLWVAHEKKLQAFMDPLLQQVEYWLAKRQLKRLVMVISEVKTKEV 95
>AF000266-9|AAC71169.1| 566|Caenorhabditis elegans Hypothetical
protein W08F4.2 protein.
Length = 566
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/51 (23%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 253 NYYKKSEIYNPTNYRGLKL-WINHLKKIYLKPSVMKIMFQLHSLYCKELIQ 402
N Y K+++ N RG W+ H+ +++L+ + + + + CKE+++
Sbjct: 91 NGYTKTQL----NVRGFAAKWLGHVNQVFLQNKGVLVRYYHSRILCKEVLE 137
>AC084158-32|AAM15619.1| 116|Caenorhabditis elegans Mad (yeast
mitosis arrest deficient)related protein 2, isoform b
protein.
Length = 116
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 298 GLKLWINHLKKI--YLKPSVMKIMFQLHSLYCKELIQLKQLVLEKHV 432
GL LW+ H KK+ ++ P + ++ + L K L+ + V K V
Sbjct: 49 GLTLWVAHEKKLQAFMDPLLQQVEYWLAKRQLKRLVMVISEVKTKEV 95
>AC084158-31|AAK68576.1| 203|Caenorhabditis elegans Mad (yeast
mitosis arrest deficient)related protein 2, isoform a
protein.
Length = 203
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 298 GLKLWINHLKKI--YLKPSVMKIMFQLHSLYCKELIQLKQLVLEKHV 432
GL LW+ H KK+ ++ P + ++ + L K L+ + V K V
Sbjct: 49 GLTLWVAHEKKLQAFMDPLLQQVEYWLAKRQLKRLVMVISEVKTKEV 95
>AC024882-2|AAF60935.2| 344|Caenorhabditis elegans Seven tm
receptor protein 156 protein.
Length = 344
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 282 IVYFTLLVIVLFENIHIKLFPYLFLHHSTGMVL 184
++YF+ L IV + + PY+F STG+VL
Sbjct: 45 LIYFSALTIV-YAALDFVAAPYMFNDESTGVVL 76
>U58755-8|AAB00697.1| 169|Caenorhabditis elegans Cyclophylin
protein 12 protein.
Length = 169
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 360 HVSITQFILQGANPTKTTRTGKTCLGE 440
H I F++QG +PT T R G + G+
Sbjct: 52 HRIIADFMIQGGDPTGTGRGGASIYGD 78
>AF078790-4|AAC26932.1| 311|Caenorhabditis elegans Hypothetical
protein F36H12.8 protein.
Length = 311
Score = 26.6 bits (56), Expect = 9.4
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 165 GTIMYTVIPCQLN-DVKINMEIILYEYFQIKLLQEE*NIQSYKLPWLEVMDKSLEENLFE 341
GT+ Y I C N ++ ++ ++ Y Q++L ++PW E+ D + +
Sbjct: 188 GTVRYAPIACHKNQELGRKDDVEVWLYMQVELTVG-------RVPWKEITDMNAVGQAKQ 240
Query: 342 AIRN 353
AIRN
Sbjct: 241 AIRN 244
>AF068713-3|AAC17793.1| 286|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 66 protein.
Length = 286
Score = 26.6 bits (56), Expect = 9.4
Identities = 9/39 (23%), Positives = 20/39 (51%)
Frame = -3
Query: 270 TLLVIVLFENIHIKLFPYLFLHHSTGMVLQCTLSCQFTF 154
TL++++ + + FP + +H + + +SC TF
Sbjct: 97 TLVLLITLDRVVASFFPIFYHNHRRRIPILAVISCVITF 135
>AF016418-5|AAK18900.1| 278|Caenorhabditis elegans Hypothetical
protein C49G7.5 protein.
Length = 278
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +3
Query: 57 IGIIMFKRVSISSKSHFC--SYNKFWN*FMD 143
+G+++ +RVS+ S H+C S N ++ F D
Sbjct: 101 MGVMVAERVSLRSTPHYCIVSINNYYRNFFD 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,299,455
Number of Sequences: 27780
Number of extensions: 171993
Number of successful extensions: 609
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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