Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_E21
(452 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0438 - 18200329-18200430,18201203-18201335,18201964-182020... 77 7e-15
03_01_0372 + 2895807-2895883,2896557-2896647,2896741-2896839,289... 31 0.43
05_07_0264 + 28779934-28781289 29 1.3
12_02_0552 + 20333744-20334114,20334241-20335942 29 2.3
11_08_0104 + 28378448-28378821,28378974-28380702 29 2.3
04_04_0523 - 25900802-25902548,25902640-25903037 29 2.3
08_01_0236 + 1982202-1982379,1982587-1982802,1982994-1983211,198... 28 3.1
10_08_0370 - 17259802-17261595 28 4.0
02_01_0743 - 5530184-5531078,5531160-5531405,5531815-5532450,553... 28 4.0
06_01_0452 + 3198475-3198962,3199062-3199191,3199332-3199497,319... 27 5.3
05_04_0384 - 20809397-20811547 27 5.3
02_05_0019 - 25025218-25026964,25027084-25027478 27 5.3
02_05_0018 - 25011623-25013764 27 5.3
02_05_0016 - 25004075-25005821,25006394-25006527 27 5.3
11_05_0032 - 18496314-18496920,18496949-18497121 27 7.1
04_04_0521 - 25880616-25882362,25883036-25883412 27 7.1
03_06_0530 - 34545699-34546013,34546121-34546354,34547006-345470... 27 7.1
02_03_0217 + 16512689-16512838,16514353-16515444 27 7.1
11_01_0442 - 3369827-3370168,3370608-3372616,3372953-3373277,337... 27 9.3
03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565... 27 9.3
02_05_0015 - 24992253-24993993,24995331-24995695 27 9.3
02_02_0193 + 7649488-7649556,7651372-7651833,7652117-7652145,765... 27 9.3
01_01_1222 + 9877607-9877691,9879235-9879390,9880070-9880148,988... 27 9.3
01_01_0559 - 4109690-4111003 27 9.3
>07_03_0438 -
18200329-18200430,18201203-18201335,18201964-18202034,
18202377-18202466,18203200-18203288,18203886-18203961,
18204094-18204264
Length = 243
Score = 77.0 bits (181), Expect = 7e-15
Identities = 44/140 (31%), Positives = 75/140 (53%), Gaps = 1/140 (0%)
Frame = +3
Query: 15 LTPAQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLEDLII-EAIYADIIHGKLD 191
L P Q +KL+ L++ TLA K +PY L++ELD+ NVR+LED +I E +Y+
Sbjct: 91 LLPDQVRKLKQLSVLTLAESTKVLPYDQLMQELDVSNVRELEDFLINECMYS-------- 142
Query: 192 QQCKRVEVDVALGRDARLEDASAIADVLADWCNSCEAVLNSVDRHIQRANHHKQRSLRHQ 371
V A GRD + + + D L+DW + + +L+ + I+ A+ + + +HQ
Sbjct: 143 -------VQFATGRDLTPDQLNNMIDTLSDWLGTSDNLLHQIQEKIKWADTMSEVNKKHQ 195
Query: 372 QGIEQEILYIKKTLKSQEVN 431
+ E ++ KK++K N
Sbjct: 196 KEFEDKVEEAKKSIKEATTN 215
>03_01_0372 +
2895807-2895883,2896557-2896647,2896741-2896839,
2897220-2897268,2897269-2897405,2898027-2898248,
2898335-2898488,2898574-2898723,2898890-2898978,
2899632-2899844,2900180-2900314,2900461-2900640,
2901004-2901111,2901215-2901340,2901421-2901550,
2901637-2901729,2902067-2902192,2902294-2902304
Length = 729
Score = 31.1 bits (67), Expect = 0.43
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +3
Query: 255 SAIADVLADWCNSCEAVLNSVDRHIQRANHHKQRSLRHQQGIEQEILYIKKTLKSQEVND 434
S++ + +AD + E V ++ Q+ +RH+QG+E EIL +K++L + ++
Sbjct: 555 SSLEERIADLISEKELVYEE----LKSTQEKMQQEMRHRQGLEDEILRLKQSL-ADNCSE 609
Query: 435 ES 440
ES
Sbjct: 610 ES 611
>05_07_0264 + 28779934-28781289
Length = 451
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 156 AIYADIIHGKLDQQCKRVEVD-VALGRDARLEDASAIADVLADWCNSCEAVLNSVDRHIQ 332
A + +I+ K + + ++ + VAL R+ R +ASA L W + V+ +D +Q
Sbjct: 225 AYFMGLINAKQKRAAEAMQAEAVALTREERWREASAARARLMSWLENATGVVTLLDVEVQ 284
Query: 333 RA 338
++
Sbjct: 285 QS 286
>12_02_0552 + 20333744-20334114,20334241-20335942
Length = 690
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 228 GRDARLEDASAIADV-LADWCNSCEAVLNSVDRHIQRANHHKQ 353
GR+ L+ A+V +A +C+ + + N V H+Q A H Q
Sbjct: 436 GRNPSLDYGFNGAEVAMASYCSELQFLANPVTNHVQTAEQHNQ 478
>11_08_0104 + 28378448-28378821,28378974-28380702
Length = 700
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 228 GRDARLEDASAIADV-LADWCNSCEAVLNSVDRHIQRANHHKQ 353
GR+ L+ A+V +A +C+ + + N V H+Q A H Q
Sbjct: 442 GRNPSLDYGFNGAEVAMASYCSELQFLANPVTNHVQTAEQHNQ 484
>04_04_0523 - 25900802-25902548,25902640-25903037
Length = 714
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 228 GRDARLEDASAIADV-LADWCNSCEAVLNSVDRHIQRANHHKQ 353
GR+ L+ A++ +A +C+ + + N V H+Q A H Q
Sbjct: 444 GRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQ 486
>08_01_0236 +
1982202-1982379,1982587-1982802,1982994-1983211,
1983718-1984341
Length = 411
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 174 IHGKLDQQCKRVEVDVALGRDARLEDASAIADVLADWCNSCEAVLNSVDRH 326
+ KLD C E DV+ G +ED V W + VL+ V R+
Sbjct: 51 VEEKLDYSCAGAEEDVSSGCSIEMEDVGEQRQVEPTWEDKVLRVLHIVRRN 101
>10_08_0370 - 17259802-17261595
Length = 597
Score = 27.9 bits (59), Expect = 4.0
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 207 VEVDVALGRDARLEDASAIADVLADWCNSC--EAVLNSVDRHIQRANHHKQRSLRHQQGI 380
V V AL RD ++E A+ I V+ NS ++ +S+ + ++ +K+ + HQ+ +
Sbjct: 524 VMVIQALCRDGKVEAAAEITKVMLSK-NSIPGNSLCSSIVTKVAKSGWNKEAQMLHQKLV 582
Query: 381 EQEIL 395
E EIL
Sbjct: 583 ECEIL 587
>02_01_0743 -
5530184-5531078,5531160-5531405,5531815-5532450,
5534499-5534607,5536157-5536321,5536446-5536543,
5536648-5536898
Length = 799
Score = 27.9 bits (59), Expect = 4.0
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 177 HGKLDQQCKRVEVDV-ALGRDARLEDASAIADVLADWCNSCEAVLNSVDRHI 329
HG+ +VDV AL R A +A VL D + EA+ S RHI
Sbjct: 49 HGERLGAAAAADVDVEALARQAEDSHCELLAGVLGDKEKAREAIFYSYTRHI 100
>06_01_0452 +
3198475-3198962,3199062-3199191,3199332-3199497,
3199765-3199883,3200056-3200136,3200236-3200322,
3200644-3200715,3200791-3200859,3201349-3201426,
3201540-3201680,3202333-3202386,3202465-3202581
Length = 533
Score = 27.5 bits (58), Expect = 5.3
Identities = 19/89 (21%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +3
Query: 108 ELDIKNVRDLEDLIIEAIYADIIHGK-LDQQCKRVEVDVALGRDARLEDA--SAIADVLA 278
E++ KN++D ++E + + ++ +E V D+ + ++ + +V A
Sbjct: 374 EINAKNLQDFCLSLLEGTLPPYFRSEPVPEEKGPIEKVVGRTFDSSVLESPQNVFLEVHA 433
Query: 279 DWCNSCEAVLNSVDRHIQRANHHKQRSLR 365
WC CEA+ +V++ + N Q +L+
Sbjct: 434 PWCVDCEAISKNVEKLAKHFNDLGQTNLK 462
>05_04_0384 - 20809397-20811547
Length = 716
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 228 GRDARLEDASAIADV-LADWCNSCEAVLNSVDRHIQRANHHKQ 353
GR+ L+ A++ +A +C+ + + N V H+Q A H Q
Sbjct: 446 GRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSAEQHNQ 488
>02_05_0019 - 25025218-25026964,25027084-25027478
Length = 713
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 228 GRDARLEDASAIADV-LADWCNSCEAVLNSVDRHIQRANHHKQ 353
GR+ L+ A++ +A +C+ + + N V H+Q A H Q
Sbjct: 443 GRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSAEQHNQ 485
>02_05_0018 - 25011623-25013764
Length = 713
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 228 GRDARLEDASAIADV-LADWCNSCEAVLNSVDRHIQRANHHKQ 353
GR+ L+ A++ +A +C+ + + N V H+Q A H Q
Sbjct: 443 GRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSAEQHNQ 485
>02_05_0016 - 25004075-25005821,25006394-25006527
Length = 626
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 228 GRDARLEDASAIADV-LADWCNSCEAVLNSVDRHIQRANHHKQ 353
GR+ L+ A++ +A +C+ + + N V H+Q A H Q
Sbjct: 356 GRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSAEQHNQ 398
>11_05_0032 - 18496314-18496920,18496949-18497121
Length = 259
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 224 SHIDFDTFALLVQFPVDYICIDSFNYKIF*ISNILN 117
SHID D F L +DY+ I F+ I S +L+
Sbjct: 197 SHIDHDDFRALDSACLDYLSIKRFSEPILQASELLD 232
>04_04_0521 - 25880616-25882362,25883036-25883412
Length = 707
Score = 27.1 bits (57), Expect = 7.1
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 273 LADWCNSCEAVLNSVDRHIQRANHHKQ 353
+A +C+ + + N V H+Q A H Q
Sbjct: 453 MASYCSELQFLANPVTNHVQSAEQHNQ 479
>03_06_0530 -
34545699-34546013,34546121-34546354,34547006-34547078,
34548226-34548299,34548852-34549004
Length = 282
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 326 HTEGQSSQTKIPSASTGYRTRDI 394
H EG S+Q K PS ST RD+
Sbjct: 191 HNEGDSTQRKYPSVSTVPSGRDV 213
>02_03_0217 + 16512689-16512838,16514353-16515444
Length = 413
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 84 IPYSVLLEELDIKNVRDLEDLIIEAI 161
+P LL LD+K RDL ++ EAI
Sbjct: 80 VPKDDLLSSLDLKESRDLSKMVHEAI 105
>11_01_0442 -
3369827-3370168,3370608-3372616,3372953-3373277,
3373386-3373415
Length = 901
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 24 AQCKKLQHLTIAT-LATQEKCIPYSVLLEEL 113
A+C+KL+HLT T LA + P + +E L
Sbjct: 276 AECRKLRHLTRRTSLANDSRPAPNNACMESL 306
>03_05_0754 +
27452203-27452242,27452360-27455611,27456480-27456533,
27456774-27456872,27456948-27457012,27457476-27457575,
27458326-27458408,27458494-27458569,27458920-27459698
Length = 1515
Score = 26.6 bits (56), Expect = 9.3
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +3
Query: 162 YADIIHGKLDQQCKRVEVDVALGRDARLEDASAIADVLADWCNSCEAVLNSVDRHIQRAN 341
Y + I + + C ++E + A R ED AIA A+ E V+ ++ + I++
Sbjct: 460 YFETIQLDMQKNCAQLEHNFAAARKQLEEDNCAIAQSQAERAQQVE-VIATLHQRIEQLE 518
Query: 342 H-HKQRSLRHQQ 374
H K+R +Q
Sbjct: 519 HMEKEREEMQRQ 530
>02_05_0015 - 24992253-24993993,24995331-24995695
Length = 701
Score = 26.6 bits (56), Expect = 9.3
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +3
Query: 273 LADWCNSCEAVLNSVDRHIQRANHHKQ 353
+A +C+ + + N + H+Q A H Q
Sbjct: 449 MASYCSELQYLANPITNHVQSAEQHNQ 475
>02_02_0193 +
7649488-7649556,7651372-7651833,7652117-7652145,
7653284-7653391,7653544-7653708,7653882-7653987,
7654105-7654731
Length = 521
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +3
Query: 273 LADWCNSCEAVLN-SVDRHIQRANHHKQRSLR-HQQGIEQEILYIKKTLK 416
+ +W N ++ S+ H+Q ++HHK + R + G+ + +L K++LK
Sbjct: 224 IREWINHTPMIVTESLQLHVQSSHHHKPKEARPYIYGLLKSLL--KQSLK 271
>01_01_1222 +
9877607-9877691,9879235-9879390,9880070-9880148,
9881471-9881711,9881794-9881868,9881960-9882094,
9882634-9882821,9882915-9882983,9883060-9883150,
9883262-9883396,9883675-9883740,9883823-9883935,
9884020-9884110
Length = 507
Score = 26.6 bits (56), Expect = 9.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 87 PYSVLLEELDIKNVRDLEDLIIEAIYADIIHGKLDQQCKRVE 212
P L EEL+ +D+E L++ I + I G +DQ K +E
Sbjct: 434 PMLFLTEELNFPE-KDVEQLLVSLILDNRIQGHIDQVNKLLE 474
>01_01_0559 - 4109690-4111003
Length = 437
Score = 26.6 bits (56), Expect = 9.3
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 180 GKLDQQCKRVEVDVALGRDARLEDASAIADVLADWCNSCEAVLNSVDRHIQRANHHKQR 356
G+L + V VD GRDA + A+A+ L D + +VD NH K +
Sbjct: 182 GELARGAGGVSVDPVWGRDAIPDPAAAVIGSLPDPAGAKRLEYLAVDISADYINHFKNQ 240
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,073,221
Number of Sequences: 37544
Number of extensions: 200169
Number of successful extensions: 706
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 883560296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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