Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_E16
(494 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z85986-1|CAI19115.1| 164|Homo sapiens splicing factor, arginine... 35 0.18
L10838-1|AAA36648.1| 164|Homo sapiens pre-mRNA splicing factor ... 35 0.18
BT007017-1|AAP35663.1| 164|Homo sapiens splicing factor, argini... 35 0.18
BC069018-1|AAH69018.1| 164|Homo sapiens splicing factor, argini... 35 0.18
BC000914-1|AAH00914.1| 164|Homo sapiens splicing factor, argini... 35 0.18
AF107405-1|AAD44523.1| 164|Homo sapiens pre-mRNA splicing facto... 35 0.18
BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein ... 33 0.54
AY675556-1|AAV91783.1| 474|Homo sapiens myocyte enhancer factor... 33 0.54
AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens ... 33 0.54
AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein ... 33 0.54
D88153-1|BAA21667.1| 340|Homo sapiens HYA22 protein. 33 0.72
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein. 32 1.3
AL138752-6|CAI13878.1| 559|Homo sapiens WD repeat domain 32 pro... 31 2.2
AK127421-1|BAC86972.1| 130|Homo sapiens protein ( Homo sapiens ... 31 2.2
AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein. 30 3.8
AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein. 30 3.8
AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein. 30 3.8
AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein. 30 3.8
AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein. 30 3.8
AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein. 30 3.8
BC014164-1|AAH14164.2| 735|Homo sapiens tetratricopeptide repea... 30 5.1
AK094181-1|BAC04301.1| 696|Homo sapiens (EC 3.1.4.17). protein. 30 5.1
AC073502-2|AAY24194.1| 349|Homo sapiens unknown protein. 30 5.1
BC017259-1|AAH17259.1| 690|Homo sapiens rabphilin 3A homolog (m... 29 6.7
BC009843-1|AAH09843.1| 621|Homo sapiens Unknown (protein for IM... 29 6.7
BC002605-1|AAH02605.1| 607|Homo sapiens Unknown (protein for IM... 29 6.7
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 29 6.7
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 29 6.7
AB023202-1|BAA76829.2| 697|Homo sapiens KIAA0985 protein protein. 29 6.7
Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV ... 29 8.9
X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 ... 29 8.9
BC048196-1|AAH48196.1| 256|Homo sapiens GIT1 protein protein. 29 8.9
AL392043-2|CAI39942.1| 104|Homo sapiens inositol polyphosphate-... 29 8.9
AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein. 29 8.9
>Z85986-1|CAI19115.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 34.7 bits (76), Expect = 0.18
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -1
Query: 236 RTRNRRSPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRA 114
R+RNR P P+ R R R R PP RR PR RS+ R+
Sbjct: 86 RSRNRGPP--PSWGRRPRDDYRRRSPPPRRRSPRRRSFSRS 124
>L10838-1|AAA36648.1| 164|Homo sapiens pre-mRNA splicing factor
protein.
Length = 164
Score = 34.7 bits (76), Expect = 0.18
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -1
Query: 236 RTRNRRSPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRA 114
R+RNR P P+ R R R R PP RR PR RS+ R+
Sbjct: 86 RSRNRGPP--PSWGRRPRDDYRRRSPPPRRRSPRRRSFSRS 124
>BT007017-1|AAP35663.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 34.7 bits (76), Expect = 0.18
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -1
Query: 236 RTRNRRSPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRA 114
R+RNR P P+ R R R R PP RR PR RS+ R+
Sbjct: 86 RSRNRGPP--PSWGRRPRDDYRRRSPPPRRRSPRRRSFSRS 124
>BC069018-1|AAH69018.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 34.7 bits (76), Expect = 0.18
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -1
Query: 236 RTRNRRSPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRA 114
R+RNR P P+ R R R R PP RR PR RS+ R+
Sbjct: 86 RSRNRGPP--PSWGRRPRDDYRRRSPPPRRRSPRRRSFSRS 124
>BC000914-1|AAH00914.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 34.7 bits (76), Expect = 0.18
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -1
Query: 236 RTRNRRSPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRA 114
R+RNR P P+ R R R R PP RR PR RS+ R+
Sbjct: 86 RSRNRGPP--PSWGRRPRDDYRRRSPPPRRRSPRRRSFSRS 124
>AF107405-1|AAD44523.1| 164|Homo sapiens pre-mRNA splicing factor
protein.
Length = 164
Score = 34.7 bits (76), Expect = 0.18
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -1
Query: 236 RTRNRRSPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRA 114
R+RNR P P+ R R R R PP RR PR RS+ R+
Sbjct: 86 RSRNRGPP--PSWGRRPRDDYRRRSPPPRRRSPRRRSFSRS 124
>BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 33.1 bits (72), Expect = 0.54
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 8 VTFESEQVVNELLKTPKQTIGGKEVDVKRATPK 106
+TFE EQ V++ + I GK+V+VKRA P+
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191
>AY675556-1|AAV91783.1| 474|Homo sapiens myocyte enhancer factor
2D/deleted in azoospermia associated protein 1 fusion p
protein.
Length = 474
Score = 33.1 bits (72), Expect = 0.54
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 8 VTFESEQVVNELLKTPKQTIGGKEVDVKRATPK 106
+TFE EQ V++ + I GK+V+VKRA P+
Sbjct: 226 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 258
>AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ32288 fis, clone PROST2000325, highly similar to
Homo sapiens DAZ associated protein 1 (DAZAP1) mRNA. ).
Length = 289
Score = 33.1 bits (72), Expect = 0.54
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 8 VTFESEQVVNELLKTPKQTIGGKEVDVKRATPK 106
+TFE EQ V++ + I GK+V+VKRA P+
Sbjct: 70 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 102
>AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 33.1 bits (72), Expect = 0.54
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 8 VTFESEQVVNELLKTPKQTIGGKEVDVKRATPK 106
+TFE EQ V++ + I GK+V+VKRA P+
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191
>D88153-1|BAA21667.1| 340|Homo sapiens HYA22 protein.
Length = 340
Score = 32.7 bits (71), Expect = 0.72
Identities = 21/45 (46%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -1
Query: 221 RSPGCPTADPRSRRGLRARPEPPCRRGPRAR-SYPRAHQAWAWLA 90
R PG P P G RARP C R P R PRA AWLA
Sbjct: 20 RGPGPPL--PERGAGRRARPGSGCERPPAPRPRAPRAAPPRAWLA 62
>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
Length = 1134
Score = 31.9 bits (69), Expect = 1.3
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = -1
Query: 248 SLPARTRNRRSPGCPTADPRSRRGLRARPEPPCRRGPR----ARSYPR 117
+LPA R+ P A PR RR P P RRGPR AR PR
Sbjct: 1011 TLPAARTMRQPPPPRLALPRRRRSPPRPPSRPARRGPRPTPQARRRPR 1058
>AL138752-6|CAI13878.1| 559|Homo sapiens WD repeat domain 32
protein.
Length = 559
Score = 31.1 bits (67), Expect = 2.2
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -1
Query: 215 PGCPTADPRSRRGLRARPEPPCRR-GPRARSYPR 117
PG P + S G + P PPCRR GP R+ R
Sbjct: 74 PGAPESSTASAPGEPSPPSPPCRRPGPDCRAKSR 107
>AK127421-1|BAC86972.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45513 fis, clone BRTHA2021450. ).
Length = 130
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = -1
Query: 251 HSLPARTRNRRSP---GCPTADPRSRRGLRARPEPPCRR-GPRARSYPRAHQAWAW 96
H+LP + R P CP D SR + R P R GP+A++ P + +W W
Sbjct: 38 HTLPGSDKPERKPTMQDCP-CDGSSRGSISKRLRGPHRGPGPQAKATPVSLPSWEW 92
>AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein.
Length = 362
Score = 30.3 bits (65), Expect = 3.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 8 VTFESEQVVNELLKTPKQTIGGKEVDVKRATPK 106
VTFESE +V ++ + I K V+ K+A PK
Sbjct: 155 VTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
>AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein.
Length = 179
Score = 30.3 bits (65), Expect = 3.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 8 VTFESEQVVNELLKTPKQTIGGKEVDVKRATPK 106
VTFESE +V ++ + I K V+ K+A PK
Sbjct: 89 VTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 121
>AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein.
Length = 181
Score = 30.3 bits (65), Expect = 3.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 8 VTFESEQVVNELLKTPKQTIGGKEVDVKRATPK 106
VTFESE +V ++ + I K V+ K+A PK
Sbjct: 92 VTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 124
>AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein.
Length = 181
Score = 30.3 bits (65), Expect = 3.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 8 VTFESEQVVNELLKTPKQTIGGKEVDVKRATPK 106
VTFESE +V ++ + I K V+ K+A PK
Sbjct: 92 VTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 124
>AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein.
Length = 180
Score = 30.3 bits (65), Expect = 3.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 8 VTFESEQVVNELLKTPKQTIGGKEVDVKRATPK 106
VTFESE +V ++ + I K V+ K+A PK
Sbjct: 92 VTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 124
>AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein.
Length = 362
Score = 30.3 bits (65), Expect = 3.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 8 VTFESEQVVNELLKTPKQTIGGKEVDVKRATPK 106
VTFESE +V ++ + I K V+ K+A PK
Sbjct: 155 VTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
>BC014164-1|AAH14164.2| 735|Homo sapiens tetratricopeptide repeat
domain 15 protein.
Length = 735
Score = 29.9 bits (64), Expect = 5.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 218 SPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRAHQAWA 99
SP + P + G RPEP RGP+A + P + + +A
Sbjct: 242 SPAPASPPPLAVPGTEGRPEPVAMRGPQAAAPPASPEPFA 281
>AK094181-1|BAC04301.1| 696|Homo sapiens (EC 3.1.4.17). protein.
Length = 696
Score = 29.9 bits (64), Expect = 5.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 218 SPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRAHQAWA 99
SP + P + G RPEP RGP+A + P + + +A
Sbjct: 225 SPAPASPPPLAVPGTEGRPEPVAMRGPQAAAPPASPEPFA 264
>AC073502-2|AAY24194.1| 349|Homo sapiens unknown protein.
Length = 349
Score = 29.9 bits (64), Expect = 5.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 218 SPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRAHQAWA 99
SP + P + G RPEP RGP+A + P + + +A
Sbjct: 242 SPAPASPPPLAVPGTEGRPEPVAMRGPQAAAPPASPEPFA 281
>BC017259-1|AAH17259.1| 690|Homo sapiens rabphilin 3A homolog
(mouse) protein.
Length = 690
Score = 29.5 bits (63), Expect = 6.7
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -1
Query: 242 PAR--TRNRRSPGCPTA-DPRSRRGLRARPEPPCRRGPRARSYPRAHQAWAW 96
PAR + +RR PG T DP S G R PP RR AR + + +W
Sbjct: 197 PARGDSEDRRGPGQKTGPDPASAPG-RGNYGPPVRRASEARMSSSSRDSESW 247
>BC009843-1|AAH09843.1| 621|Homo sapiens Unknown (protein for
IMAGE:3944479) protein.
Length = 621
Score = 29.5 bits (63), Expect = 6.7
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -1
Query: 242 PAR--TRNRRSPGCPTA-DPRSRRGLRARPEPPCRRGPRARSYPRAHQAWAW 96
PAR + +RR PG T DP S G R PP RR AR + + +W
Sbjct: 197 PARGDSEDRRGPGQKTGPDPASAPG-RGNYGPPVRRASEARMSSSSRDSESW 247
>BC002605-1|AAH02605.1| 607|Homo sapiens Unknown (protein for
IMAGE:3160482) protein.
Length = 607
Score = 29.5 bits (63), Expect = 6.7
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -1
Query: 242 PAR--TRNRRSPGCPTA-DPRSRRGLRARPEPPCRRGPRARSYPRAHQAWAW 96
PAR + +RR PG T DP S G R PP RR AR + + +W
Sbjct: 197 PARGDSEDRRGPGQKTGPDPASAPG-RGNYGPPVRRASEARMSSSSRDSESW 247
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -1
Query: 239 ARTRNRRSPGCPTADPRSRRGLRARPEPPCRRGPRARSYPR 117
+RTR+R SP R R R RP P R PR R+ PR
Sbjct: 286 SRTRSR-SPSHTRPRRRHRSRSRRRPSPRRRPSPRRRTPPR 325
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -1
Query: 239 ARTRNRRSPGCPTADPRSRRGLRARPEPPCRRGPRARSYPR 117
+RTR+R SP R R R RP P R PR R+ PR
Sbjct: 286 SRTRSR-SPSHTRPRRRHRSRSRRRPSPRRRPSPRRRTPPR 325
>AB023202-1|BAA76829.2| 697|Homo sapiens KIAA0985 protein protein.
Length = 697
Score = 29.5 bits (63), Expect = 6.7
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -1
Query: 242 PAR--TRNRRSPGCPTA-DPRSRRGLRARPEPPCRRGPRARSYPRAHQAWAW 96
PAR + +RR PG T DP S G R PP RR AR + + +W
Sbjct: 204 PARGDSEDRRGPGQKTGPDPASAPG-RGNYGPPVRRASEARMSSSSRDSESW 254
>Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV
protein.
Length = 1690
Score = 29.1 bits (62), Expect = 8.9
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -1
Query: 245 LPARTRNRRSPGCPTADPRSRRGLRARPEPPCRRGP 138
+P R PG P P RG + P PP GP
Sbjct: 1205 IPGLKGERGDPGSPGISPPGPRGKKGPPGPPGSSGP 1240
>X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 chain
protein.
Length = 1690
Score = 29.1 bits (62), Expect = 8.9
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -1
Query: 245 LPARTRNRRSPGCPTADPRSRRGLRARPEPPCRRGP 138
+P R PG P P RG + P PP GP
Sbjct: 1205 IPGLKGERGDPGSPGISPPGPRGKKGPPGPPGSSGP 1240
>BC048196-1|AAH48196.1| 256|Homo sapiens GIT1 protein protein.
Length = 256
Score = 29.1 bits (62), Expect = 8.9
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -1
Query: 242 PARTRNRRSPGCPTADPR-SRRGLRARPEPPCRRGPRA 132
P RR PG P A P ++R A P R+GPRA
Sbjct: 51 PGSRGRRRRPGPPPAPPTLAQRAAAASPLRMSRKGPRA 88
>AL392043-2|CAI39942.1| 104|Homo sapiens inositol
polyphosphate-5-phosphatase, 40kDa protein.
Length = 104
Score = 29.1 bits (62), Expect = 8.9
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 206 PTADPRSRRGLRARPEPPCRRGPRARS 126
P A R +R R EPPC RGP S
Sbjct: 78 PGAGKRCQRHERTLREPPCSRGPNTHS 104
>AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein.
Length = 1324
Score = 29.1 bits (62), Expect = 8.9
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -1
Query: 245 LPARTRNRRSPGCPTADPRSRRGLRARPEPPCRRGP 138
+P R PG P P RG + P PP GP
Sbjct: 1205 IPGLKGERGDPGSPGISPPGPRGKKGPPGPPGSSGP 1240
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,629,574
Number of Sequences: 237096
Number of extensions: 470755
Number of successful extensions: 2271
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 2129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2264
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4479766258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -