Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_E11
(582 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 36 3e-04
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 34 9e-04
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 33 0.002
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 33 0.002
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 23 2.9
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 23 2.9
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 22 3.8
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 3.8
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 22 3.8
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 8.9
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 8.9
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 35.9 bits (79), Expect = 3e-04
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +1
Query: 16 GESVSIECASLSVPKPDDIRWFFEGKEISAIHDPDYATLEESLPDGIVKSSLVIRASQSK 195
G ++ C + P+P+ I W +G E+ H + E + + +KS + I + K
Sbjct: 37 GRKITFFCMATGFPRPE-ITWLKDGIEL--YHHKFFQVHEWPVGNDTLKSKMEIDPATQK 93
Query: 196 HYGLYNCSVTNEY 234
G Y C N+Y
Sbjct: 94 DAGYYECQADNQY 106
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 34.3 bits (75), Expect = 9e-04
Identities = 21/77 (27%), Positives = 37/77 (48%)
Frame = +1
Query: 16 GESVSIECASLSVPKPDDIRWFFEGKEISAIHDPDYATLEESLPDGIVKSSLVIRASQSK 195
GE +++C + P +IRW + G+E+ L + + D + S L+I ++
Sbjct: 598 GEFANLQCIVPTGDLPLNIRWSYPGEEMGG----SSGVLAKKVADRV--SMLMISVITAR 651
Query: 196 HYGLYNCSVTNEYGNAN 246
H G Y C+ N G A+
Sbjct: 652 HAGEYVCTAENAAGTAS 668
Score = 26.2 bits (55), Expect = 0.24
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 157 VKSSLVIRASQSKHYGLYNCSVTNEYGNANAGIMLKPTKTLPL 285
V +L+IR ++ + G Y C V N G + +L T T PL
Sbjct: 268 VSGTLIIREARVEDSGKYLCIVNNSVGGESVETVL--TVTAPL 308
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 33.1 bits (72), Expect = 0.002
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 13 EGESVSIECASLSVPKPDDIRWFFEGK-EISAIHDPDYATLEESLPDGIVKSSLVIRASQ 189
+G++ ++ C + P + W GK E++ + E PDG++ + L I +++
Sbjct: 821 KGDTATLHC-EVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVI-AQLQISSAE 878
Query: 190 SKHYGLYNCSVTNEYG 237
+ G Y C +N YG
Sbjct: 879 ASDSGAYFCQASNLYG 894
Score = 32.3 bits (70), Expect = 0.004
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +1
Query: 10 SEGESVSIECASLSVPKPDDIRWFFE-GKEISAIHDPDYATLEESLPDGIVKSSLVIRAS 186
++ ES S+ C + + P P+ RW+ + G E + L + S L + A
Sbjct: 250 AQDESTSLVCVAQACPTPE-YRWYAQTGSEPMLVLSGPRTRL--------LGSVLALEAV 300
Query: 187 QSKHYGLYNCSVTNEYGNANAGIMLKPTKTL 279
+ G+Y CS +N G A+A I L T L
Sbjct: 301 TLEDNGIYRCSASNPGGEASAEIRLIVTAPL 331
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 33.1 bits (72), Expect = 0.002
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 13 EGESVSIECASLSVPKPDDIRWFFEGK-EISAIHDPDYATLEESLPDGIVKSSLVIRASQ 189
+G++ ++ C + P + W GK E++ + E PDG++ + L I +++
Sbjct: 817 KGDTATLHC-EVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVI-AQLQISSAE 874
Query: 190 SKHYGLYNCSVTNEYG 237
+ G Y C +N YG
Sbjct: 875 ASDSGAYFCQASNLYG 890
Score = 32.3 bits (70), Expect = 0.004
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +1
Query: 10 SEGESVSIECASLSVPKPDDIRWFFE-GKEISAIHDPDYATLEESLPDGIVKSSLVIRAS 186
++ ES S+ C + + P P+ RW+ + G E + L + S L + A
Sbjct: 250 AQDESTSLVCVAQACPTPE-YRWYAQTGSEPMLVLSGPRTRL--------LGSVLALEAV 300
Query: 187 QSKHYGLYNCSVTNEYGNANAGIMLKPTKTL 279
+ G+Y CS +N G A+A I L T L
Sbjct: 301 TLEDNGIYRCSASNPGGEASAEIRLIVTAPL 331
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1
Query: 178 RASQSKHYGLYNC 216
RAS KHYG+Y+C
Sbjct: 116 RAS-GKHYGVYSC 127
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1
Query: 178 RASQSKHYGLYNC 216
RAS KHYG+Y+C
Sbjct: 116 RAS-GKHYGVYSC 127
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1
Query: 97 ISAIHDPDYATLE 135
IS IHDPD+ LE
Sbjct: 372 ISYIHDPDHRYLE 384
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 97 ISAIHDPDYATLEESLPDGIV 159
I +H D ATL + + +GIV
Sbjct: 199 IDYVHPKDKATLADQIKNGIV 219
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 97 ISAIHDPDYATLEESLPDGIV 159
I +H D ATL + + +GIV
Sbjct: 194 IDYVHPKDKATLADQIKNGIV 214
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.0 bits (42), Expect = 8.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 178 RASQSKHYGLYNCSVTNEYGN 240
RA+ S+HY Y +NE N
Sbjct: 169 RATDSRHYDRYKEEESNENYN 189
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.0 bits (42), Expect = 8.9
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 457 NISDLKLQLPQSDGSYDLEYTGSDRSD 537
NISD+ L Q+ YD+ + D+ +
Sbjct: 788 NISDIALYPSQTTHGYDIYASSIDKEN 814
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.312 0.130 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,899
Number of Sequences: 438
Number of extensions: 2622
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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