Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0007_E08
(444 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 122 3e-29
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 66 3e-12
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 63 2e-11
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 63 2e-11
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 59 3e-10
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 59 3e-10
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 50 2e-07
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 49 4e-07
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 48 5e-07
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 44 1e-05
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 43 2e-05
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 36 0.004
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 33 0.026
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 29 0.42
SPAC23A1.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 26 2.3
SPBC947.15c |||NADH dehydrogenase|Schizosaccharomyces pombe|chr ... 25 4.0
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 25 5.2
SPCC794.08 |||HEAT repeat protein, unknown biological role|Schiz... 25 5.2
SPAC6C3.06c |||P-type ATPase, calcium transporting|Schizosacchar... 24 9.1
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 122 bits (293), Expect = 3e-29
Identities = 51/72 (70%), Positives = 60/72 (83%)
Frame = +3
Query: 228 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 407
MST ARRRLMRDFKR+Q+DPP GVS +P +N+M+WNAVI GP DTPFEDGTFKL + F
Sbjct: 1 MSTTARRRLMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFD 60
Query: 408 EEYPNKPATVRF 443
E+YPNKP V+F
Sbjct: 61 EQYPNKPPLVKF 72
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 65.7 bits (153), Expect = 3e-12
Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Frame = +3
Query: 240 ARRRLMRDFKRLQEDPPTGVSGAPT-DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEY 416
A RRLM+++K L E+ P G++ P+ +++ W+ +I GP TPFE G + T++F +Y
Sbjct: 6 ALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDY 65
Query: 417 PNKPATVRF 443
P P T++F
Sbjct: 66 PLGPPTLKF 74
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 63.3 bits (147), Expect = 2e-11
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = +3
Query: 240 ARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 419
A +R+ R+ L +DPP+ S P +++ W A I GP D+P+ G F L+I F +YP
Sbjct: 2 ALKRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYP 61
Query: 420 NKPATVRF 443
KP V F
Sbjct: 62 FKPPKVNF 69
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 62.9 bits (146), Expect = 2e-11
Identities = 28/70 (40%), Positives = 42/70 (60%)
Frame = +3
Query: 231 STPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTE 410
S A +RLM+++ LQ++P V P NI+ W+ +I GP DTP+E G + T+ F
Sbjct: 3 SKGAYKRLMKEYLALQKNPVELVDAKPATENILEWHYIITGPPDTPYEGGQYHGTLIFPP 62
Query: 411 EYPNKPATVR 440
+YP KP +R
Sbjct: 63 DYPFKPPAIR 72
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 58.8 bits (136), Expect = 3e-10
Identities = 23/66 (34%), Positives = 39/66 (59%)
Frame = +3
Query: 246 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNK 425
+R++++ + L DPP G+ APT++N+ + + GP + +E G F L + +EYP
Sbjct: 5 KRIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMM 64
Query: 426 PATVRF 443
P VRF
Sbjct: 65 PPNVRF 70
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 58.8 bits (136), Expect = 3e-10
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +3
Query: 231 STPARRRLMRDFKRLQEDPPTGVS-GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 407
S+ + + L + K +Q++PP G S G D +I W +I GP DT +E G F T+ F
Sbjct: 3 SSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFP 62
Query: 408 EEYPNKPATVRF 443
++YP P ++F
Sbjct: 63 QDYPLMPPKMKF 74
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 49.6 bits (113), Expect = 2e-07
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +3
Query: 231 STPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTE 410
S + RRL +++ L+E P + D+N+ W GP D+ + G F +++F
Sbjct: 5 SPSSSRRLTKEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPL 64
Query: 411 EYPNKPATVRF 443
+YP +P T+ F
Sbjct: 65 DYPFQPPTIEF 75
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 48.8 bits (111), Expect = 4e-07
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = +3
Query: 228 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNN-----IMIWNAVIFGPHDTPFEDGTFKL 392
MS+ + RL + K+ + D P G P ++ +M W I G T +E G +KL
Sbjct: 1 MSSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKL 60
Query: 393 TIEFTEEYPNKPATVRF 443
T+ F EEYP +P RF
Sbjct: 61 TMAFPEEYPTRPPKCRF 77
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 48.4 bits (110), Expect = 5e-07
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 246 RRLMRDFKRLQEDPPTGVSGAP-TDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPN 422
+RL + L G+S P +D+N++ W I GP DT +E FK+++ F YP
Sbjct: 31 KRLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPY 90
Query: 423 KPATVRF 443
P T+ F
Sbjct: 91 SPPTIIF 97
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 44.0 bits (99), Expect = 1e-05
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +3
Query: 228 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 407
MS RR+ ++ +Q+D G+ +++I + GP TP+E G F + IE
Sbjct: 1 MSDNRSRRIAKELADVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIP 60
Query: 408 EEYPNKPATVRF 443
+YP +P + F
Sbjct: 61 IDYPFRPPKMNF 72
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 43.2 bits (97), Expect = 2e-05
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +3
Query: 246 RRLMRDFKRLQEDPPTGVS--GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 419
+RL +++ Q +G+ TD ++ W AVI GP +TP+E G + L I E YP
Sbjct: 6 KRLHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYP 65
Query: 420 NKPATVRF 443
P +V F
Sbjct: 66 ISPPSVYF 73
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 35.5 bits (78), Expect = 0.004
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 228 MSTPARRRLMRD-FKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEF 404
MS+P RRR+ D K L D + ++N+ + GP +TP+ G +K+ +E
Sbjct: 1 MSSP-RRRIETDVMKLLMSDYEVTL----VNDNMQEFYVRFHGPSETPYSGGIWKVHVEL 55
Query: 405 TEEYPNKPATVRF 443
EYP K ++ F
Sbjct: 56 PSEYPWKSPSIGF 68
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 32.7 bits (71), Expect = 0.026
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 315 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPATVRF 443
D + WNA I GP + E+ + L I YP+ P V F
Sbjct: 35 DITLSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTF 77
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 28.7 bits (61), Expect = 0.42
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 48 TISLIVTTIFLHNDKETIHKNCVYNKLI*MLKFNRVKS 161
TI+ IVT +FLH DKE++ ++ K RVKS
Sbjct: 176 TIAPIVTDVFLHEDKESLTDLRFFSNEEAESKVTRVKS 213
>SPAC23A1.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 251
Score = 26.2 bits (55), Expect = 2.3
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -3
Query: 136 IYISLLYTQFLWIVSLSLCKKIVVTI 59
I+I+L Y W+ SL +CK ++ +
Sbjct: 53 IFINLKYQSKKWLYSLVICKSLIALL 78
>SPBC947.15c |||NADH dehydrogenase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 551
Score = 25.4 bits (53), Expect = 4.0
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = +3
Query: 252 LMRDFKRLQEDPPTGVSGAPTDNNIMI---WNAV 344
L + +RL P G SG P N +++ W AV
Sbjct: 70 LFQSLRRLNNSSPKGKSGVPKKNIVVLGSGWGAV 103
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 25.0 bits (52), Expect = 5.2
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 170 SILRRRPIVHFSSLST*NQNVNSSKKTPDERFQTF-TRRPTNR 295
S+ RR+P+ S S +S KK P F+ F +RR N+
Sbjct: 570 SLARRKPLPDTESHSPSPSATSSIKKNPSSIFRRFSSRRKQNK 612
>SPCC794.08 |||HEAT repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 798
Score = 25.0 bits (52), Expect = 5.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 296 CVWCSH**QYYDLECCDIW 352
C+ C QYYD E D+W
Sbjct: 398 CITCLTKHQYYDEEFADVW 416
>SPAC6C3.06c |||P-type ATPase, calcium
transporting|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1033
Score = 24.2 bits (50), Expect = 9.1
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -1
Query: 192 IGLRRNIDLAKILH 151
I LR N+DLAKI+H
Sbjct: 362 INLRVNLDLAKIVH 375
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,796,242
Number of Sequences: 5004
Number of extensions: 35451
Number of successful extensions: 104
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 162176800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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